RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 VPS37DQ86XT2 251 aa29.02■■■□□ 2.24
CLIC3-203ENST00000494426 IQSEC3Q9UPP2 1182 aaPredicted RBP29.02■■■□□ 2.24
CLIC3-203ENST00000494426 USP17L8P0C7I0 530 aa29.01■■■□□ 2.23
CLIC3-203ENST00000494426 ADORA1P30542 326 aa29.01■■■□□ 2.23
CLIC3-203ENST00000494426 A0A1B0GUL7 405 aa29■■■□□ 2.23
CLIC3-203ENST00000494426 FKBP1AP62942 108 aaKnown RBP29■■■□□ 2.23
CLIC3-203ENST00000494426 RBM26Q5T8P6 1007 aaKnown RBP29■■■□□ 2.23
CLIC3-203ENST00000494426 MAP1SQ66K74 1059 aaPredicted RBP29■■■□□ 2.23
CLIC3-203ENST00000494426 PGAP2Q9UHJ9 254 aa29■■■□□ 2.23
CLIC3-203ENST00000494426 AKAP2Q9Y2D5 859 aa29■■■□□ 2.23
CLIC3-203ENST00000494426 ITGBL1O95965 494 aaPredicted RBP28.99■■■□□ 2.23
CLIC3-203ENST00000494426 KIAA0825Q8IV33 1275 aa28.98■■■□□ 2.23
CLIC3-203ENST00000494426 HSPA6P17066 643 aa28.97■■■□□ 2.23
CLIC3-203ENST00000494426 OS9Q13438 667 aaPredicted RBP28.97■■■□□ 2.23
CLIC3-203ENST00000494426 KIF4BQ2VIQ3 1234 aa28.97■■■□□ 2.23
CLIC3-203ENST00000494426 CNTROBQ8N137 903 aa28.97■■■□□ 2.23
CLIC3-203ENST00000494426 XAGE2Q96GT9 111 aa28.97■■■□□ 2.23
CLIC3-203ENST00000494426 MYOZ2Q9NPC6 264 aa28.97■■■□□ 2.23
CLIC3-203ENST00000494426 EXOC6BQ9Y2D4 811 aa28.97■■■□□ 2.23
CLIC3-203ENST00000494426 MYH13Q9UKX3 1938 aa28.96■■■□□ 2.23
CLIC3-203ENST00000494426 PHKA1P46020 1223 aa28.96■■■□□ 2.23
CLIC3-203ENST00000494426 ZC3H15Q8WU90 426 aaKnown RBP28.96■■■□□ 2.23
CLIC3-203ENST00000494426 CRBNQ96SW2 442 aa28.96■■■□□ 2.23
CLIC3-203ENST00000494426 CHAF1AQ13111 956 aaPredicted RBP28.95■■■□□ 2.22
CLIC3-203ENST00000494426 CCDC102BQ68D86 513 aa28.95■■■□□ 2.22
CLIC3-203ENST00000494426 NEUROD6Q96NK8 337 aa28.95■■■□□ 2.22
CLIC3-203ENST00000494426 GPR108Q9NPR9 543 aa28.95■■■□□ 2.22
CLIC3-203ENST00000494426 COL1A1P02452 1464 aaPredicted RBP28.95■■■□□ 2.22
CLIC3-203ENST00000494426 PASKQ96RG2 1323 aa28.94■■■□□ 2.22
CLIC3-203ENST00000494426 HMMRO75330 724 aa28.94■■■□□ 2.22
CLIC3-203ENST00000494426 FRAT2O75474 233 aaPredicted RBP28.94■■■□□ 2.22
CLIC3-203ENST00000494426 MFSD14BQ5SR56 506 aa28.94■■■□□ 2.22
CLIC3-203ENST00000494426 ASTN2O75129 1339 aaPredicted RBP28.94■■■□□ 2.22
CLIC3-203ENST00000494426 POLR2AP24928 1970 aaKnown RBP28.93■■■□□ 2.22
CLIC3-203ENST00000494426 MMP14P50281 582 aa28.93■■■□□ 2.22
CLIC3-203ENST00000494426 GRIK5Q16478 980 aa28.93■■■□□ 2.22
CLIC3-203ENST00000494426 TNNI3KQ59H18 835 aa28.93■■■□□ 2.22
CLIC3-203ENST00000494426 OGFOD1Q8N543 542 aa28.93■■■□□ 2.22
CLIC3-203ENST00000494426 SUPT16HQ9Y5B9 1047 aaKnown RBP28.93■■■□□ 2.22
CLIC3-203ENST00000494426 FPGT-TNNI3KV9GXZ4 949 aa28.93■■■□□ 2.22
CLIC3-203ENST00000494426 F8W031 263 aaPredicted RBP28.92■■■□□ 2.22
CLIC3-203ENST00000494426 ZBTB22O15209 634 aa28.92■■■□□ 2.22
CLIC3-203ENST00000494426 SCARF1Q14162 830 aa28.91■■■□□ 2.22
CLIC3-203ENST00000494426 GNL3LQ9NVN8 582 aaKnown RBP28.91■■■□□ 2.22
CLIC3-203ENST00000494426 HDAC9Q9UKV0 1011 aa28.91■■■□□ 2.22
CLIC3-203ENST00000494426 FMR1Q06787 632 aaKnown RBP eCLIP28.9■■■□□ 2.22
CLIC3-203ENST00000494426 ZBED3Q96IU2 234 aaPredicted RBP28.9■■■□□ 2.22
CLIC3-203ENST00000494426 NBPF9Q3BBW0 867 aa28.89■■■□□ 2.22
CLIC3-203ENST00000494426 TBC1D22AQ8WUA7 517 aa28.89■■■□□ 2.22
CLIC3-203ENST00000494426 GLIS2Q9BZE0 524 aaPredicted RBP28.89■■■□□ 2.22
CLIC3-203ENST00000494426 PCDHB15Q9Y5E8 787 aa28.89■■■□□ 2.22
CLIC3-203ENST00000494426 WNT10BO00744 389 aa28.88■■■□□ 2.21
CLIC3-203ENST00000494426 SEMA3EO15041 775 aa28.88■■■□□ 2.21
CLIC3-203ENST00000494426 APLP1P51693 650 aa28.88■■■□□ 2.21
CLIC3-203ENST00000494426 HSP90AB4PQ58FF6 505 aa28.88■■■□□ 2.21
CLIC3-203ENST00000494426 ERC1Q8IUD2 1116 aa28.88■■■□□ 2.21
CLIC3-203ENST00000494426 EAF2Q96CJ1 260 aaPredicted RBP28.88■■■□□ 2.21
CLIC3-203ENST00000494426 DBNDD2Q9BQY9 259 aa28.88■■■□□ 2.21
CLIC3-203ENST00000494426 PCDHAC2Q9Y5I4 1007 aa28.88■■■□□ 2.21
CLIC3-203ENST00000494426 RHPN1Q8TCX5 695 aa28.87■■■□□ 2.21
CLIC3-203ENST00000494426 DENND2AQ9ULE3 1009 aa28.87■■■□□ 2.21
CLIC3-203ENST00000494426 TTF2Q9UNY4 1162 aaKnown RBP28.87■■■□□ 2.21
CLIC3-203ENST00000494426 TRAF5O00463 557 aa28.86■■■□□ 2.21
CLIC3-203ENST00000494426 RASGRF1Q13972 1273 aa28.86■■■□□ 2.21
CLIC3-203ENST00000494426 CDC37L1Q7L3B6 337 aa28.86■■■□□ 2.21
CLIC3-203ENST00000494426 MTMR14Q8NCE2 650 aa28.86■■■□□ 2.21
CLIC3-203ENST00000494426 WDR66Q8TBY9 1149 aa28.86■■■□□ 2.21
CLIC3-203ENST00000494426 GGA3Q9NZ52 723 aa28.86■■■□□ 2.21
CLIC3-203ENST00000494426 HTRA3P83110 453 aa28.85■■■□□ 2.21
CLIC3-203ENST00000494426 CFAP100Q494V2 611 aa28.85■■■□□ 2.21
CLIC3-203ENST00000494426 GORABQ5T7V8 394 aa28.85■■■□□ 2.21
CLIC3-203ENST00000494426 ANGEL2Q5VTE6 544 aaKnown RBP28.85■■■□□ 2.21
CLIC3-203ENST00000494426 DLK2Q6UY11 383 aa28.85■■■□□ 2.21
CLIC3-203ENST00000494426 USP48Q86UV5 1035 aa28.85■■■□□ 2.21
CLIC3-203ENST00000494426 CCDC8Q9H0W5 538 aaPredicted RBP28.85■■■□□ 2.21
CLIC3-203ENST00000494426 TLR7Q9NYK1 1049 aaKnown RBP28.85■■■□□ 2.21
CLIC3-203ENST00000494426 ARID4AP29374 1257 aaPredicted RBP28.84■■■□□ 2.21
CLIC3-203ENST00000494426 DCPSQ96C86 337 aaKnown RBP28.84■■■□□ 2.21
CLIC3-203ENST00000494426 IL1RAPL2Q9NP60 686 aa28.84■■■□□ 2.21
CLIC3-203ENST00000494426 DBNLQ9UJU6 430 aaKnown RBP28.84■■■□□ 2.21
CLIC3-203ENST00000494426 TRPM7Q96QT4 1865 aa28.83■■■□□ 2.21
CLIC3-203ENST00000494426 APBB1O00213 710 aa28.83■■■□□ 2.21
CLIC3-203ENST00000494426 RAB11FIP3O75154 756 aa28.83■■■□□ 2.21
CLIC3-203ENST00000494426 DLGAP5Q15398 846 aa28.83■■■□□ 2.21
CLIC3-203ENST00000494426 KIF1BPQ96EK5 621 aa28.83■■■□□ 2.21
CLIC3-203ENST00000494426 PRMT6Q96LA8 375 aaPredicted RBP28.83■■■□□ 2.21
CLIC3-203ENST00000494426 SUGT1Q9Y2Z0 365 aa28.83■■■□□ 2.21
CLIC3-203ENST00000494426 PDS5AQ29RF7 1337 aaKnown RBP28.83■■■□□ 2.21
CLIC3-203ENST00000494426 SALL1Q9NSC2 1324 aa28.83■■■□□ 2.21
CLIC3-203ENST00000494426 KRT26Q7Z3Y9 468 aa28.82■■■□□ 2.2
CLIC3-203ENST00000494426 HMG20BQ9P0W2 317 aa28.82■■■□□ 2.2
CLIC3-203ENST00000494426 SERPINA10Q9UK55 444 aa28.82■■■□□ 2.2
CLIC3-203ENST00000494426 AOX1Q06278 1338 aa28.82■■■□□ 2.2
CLIC3-203ENST00000494426 ECM29Q5VYK3 1845 aa28.82■■■□□ 2.2
CLIC3-203ENST00000494426 ADM5C9JUS6 153 aa28.81■■■□□ 2.2
CLIC3-203ENST00000494426 DCTPP1Q9H773 170 aa28.81■■■□□ 2.2
CLIC3-203ENST00000494426 SCAF8Q9UPN6 1271 aaKnown RBP28.81■■■□□ 2.2
CLIC3-203ENST00000494426 AKAP11Q9UKA4 1901 aa28.81■■■□□ 2.2
CLIC3-203ENST00000494426 PITPNM2Q9BZ72 1349 aa28.8■■■□□ 2.2
CLIC3-203ENST00000494426 SPDYE2BA6NHP3 402 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms