RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 TM4SF5O14894 197 aa10.05□□□□□ -0.8
MSL3-217ENST00000494268 FSCN2O14926 492 aa10.05□□□□□ -0.8
MSL3-217ENST00000494268 FCGRTP55899 365 aa10.05□□□□□ -0.8
MSL3-217ENST00000494268 PRPF40BQ6NWY9 871 aaKnown RBP10.05□□□□□ -0.8
MSL3-217ENST00000494268 SLC7A3Q8WY07 619 aa10.05□□□□□ -0.8
MSL3-217ENST00000494268 TRAK1Q9UPV9 953 aa10.05□□□□□ -0.8
MSL3-217ENST00000494268 ELNP15502 786 aa10.04□□□□□ -0.8
MSL3-217ENST00000494268 IKBKEQ14164 716 aa10.04□□□□□ -0.8
MSL3-217ENST00000494268 ZNF423Q2M1K9 1284 aa10.04□□□□□ -0.8
MSL3-217ENST00000494268 KLHDC7BQ96G42 594 aa10.04□□□□□ -0.8
MSL3-217ENST00000494268 DLL1O00548 723 aa10.03□□□□□ -0.8
MSL3-217ENST00000494268 ESRRAP11474 423 aaPredicted RBP10.03□□□□□ -0.8
MSL3-217ENST00000494268 SELPP16109 830 aa10.03□□□□□ -0.8
MSL3-217ENST00000494268 ITPKAP23677 461 aa10.03□□□□□ -0.8
MSL3-217ENST00000494268 FAM117BQ6P1L5 589 aa10.03□□□□□ -0.8
MSL3-217ENST00000494268 PPP4R2Q9NY27 417 aa10.03□□□□□ -0.8
MSL3-217ENST00000494268 KCNK4Q9NYG8 393 aa10.03□□□□□ -0.8
MSL3-217ENST00000494268 PARP2Q9UGN5 583 aa10.03□□□□□ -0.8
MSL3-217ENST00000494268 DDX3YO15523 660 aaKnown RBP10.02□□□□□ -0.81
MSL3-217ENST00000494268 PCDH1Q08174 1060 aa10.02□□□□□ -0.81
MSL3-217ENST00000494268 DTHD1Q6ZMT9 781 aa10.02□□□□□ -0.81
MSL3-217ENST00000494268 ALYREFQ86V81 257 aaKnown RBP10.02□□□□□ -0.81
MSL3-217ENST00000494268 FAM161BQ96MY7 647 aa10.02□□□□□ -0.81
MSL3-217ENST00000494268 BCL2L13Q9BXK5 485 aa10.02□□□□□ -0.81
MSL3-217ENST00000494268 CLEC4MQ9H2X3 399 aaPredicted RBP10.02□□□□□ -0.81
MSL3-217ENST00000494268 ZNF576Q9H609 170 aa10.02□□□□□ -0.81
MSL3-217ENST00000494268 SEC31BQ9NQW1 1179 aa10.02□□□□□ -0.81
MSL3-217ENST00000494268 SPG7Q9UQ90 795 aa10.02□□□□□ -0.81
MSL3-217ENST00000494268 ITGB2P05107 769 aa10.01□□□□□ -0.81
MSL3-217ENST00000494268 PIP4K2BP78356 416 aa10.01□□□□□ -0.81
MSL3-217ENST00000494268 MAP4K3Q8IVH8 894 aa10.01□□□□□ -0.81
MSL3-217ENST00000494268 C1QTNF9BB2RNN3 333 aa10□□□□□ -0.81
MSL3-217ENST00000494268 GNA15P30679 374 aa10□□□□□ -0.81
MSL3-217ENST00000494268 CD68P34810 354 aaPredicted RBP10□□□□□ -0.81
MSL3-217ENST00000494268 CHRNA4P43681 627 aa10□□□□□ -0.81
MSL3-217ENST00000494268 FOXD4L6Q3SYB3 417 aaPredicted RBP10□□□□□ -0.81
MSL3-217ENST00000494268 FOXD4L3Q6VB84 417 aaPredicted RBP10□□□□□ -0.81
MSL3-217ENST00000494268 CD163Q86VB7 1156 aa10□□□□□ -0.81
MSL3-217ENST00000494268 C3orf58Q8NDZ4 430 aa10□□□□□ -0.81
MSL3-217ENST00000494268 GIPC2Q8TF65 315 aa10□□□□□ -0.81
MSL3-217ENST00000494268 SRA1Q9HD15 236 aaKnown RBP10□□□□□ -0.81
MSL3-217ENST00000494268 AKAP2Q9Y2D5 859 aa10□□□□□ -0.81
MSL3-217ENST00000494268 GIPC1O14908 333 aa9.99□□□□□ -0.81
MSL3-217ENST00000494268 ADAM11O75078 769 aa9.99□□□□□ -0.81
MSL3-217ENST00000494268 APBA3O96018 575 aa9.99□□□□□ -0.81
MSL3-217ENST00000494268 ZNF157P51786 506 aaPredicted RBP9.99□□□□□ -0.81
MSL3-217ENST00000494268 FAAP100Q0VG06 881 aa9.99□□□□□ -0.81
MSL3-217ENST00000494268 IGF2-ASQ6U949 168 aa9.99□□□□□ -0.81
MSL3-217ENST00000494268 KLHL23Q8NBE8 558 aa9.99□□□□□ -0.81
MSL3-217ENST00000494268 WNT8BQ93098 351 aa9.99□□□□□ -0.81
MSL3-217ENST00000494268 C12orf49Q9H741 205 aa9.99□□□□□ -0.81
MSL3-217ENST00000494268 OSGEPQ9NPF4 335 aa9.99□□□□□ -0.81
MSL3-217ENST00000494268 AK5Q9Y6K8 562 aa9.99□□□□□ -0.81
MSL3-217ENST00000494268 FGD1P98174 961 aa9.98□□□□□ -0.81
MSL3-217ENST00000494268 PTPN12Q05209 780 aaKnown RBP9.98□□□□□ -0.81
MSL3-217ENST00000494268 C19orf57Q0VDD7 668 aa9.98□□□□□ -0.81
MSL3-217ENST00000494268 PLA2G4EQ3MJ16 856 aa9.98□□□□□ -0.81
MSL3-217ENST00000494268 LENG1Q96BZ8 264 aaPredicted RBP9.98□□□□□ -0.81
MSL3-217ENST00000494268 WISP1O95388 367 aa9.97□□□□□ -0.81
MSL3-217ENST00000494268 ARL4DP49703 201 aa9.97□□□□□ -0.81
MSL3-217ENST00000494268 NLRP12P59046 1061 aa9.97□□□□□ -0.81
MSL3-217ENST00000494268 DAB2P98082 770 aa9.97□□□□□ -0.81
MSL3-217ENST00000494268 XPCQ01831 940 aaPredicted RBP9.97□□□□□ -0.81
MSL3-217ENST00000494268 GSTM4Q03013 218 aa9.97□□□□□ -0.81
MSL3-217ENST00000494268 SUZ12Q15022 739 aaKnown RBP9.97□□□□□ -0.81
MSL3-217ENST00000494268 FOXD4L4Q8WXT5 416 aaPredicted RBP9.97□□□□□ -0.81
MSL3-217ENST00000494268 FRMD6Q96NE9 622 aa9.97□□□□□ -0.81
MSL3-217ENST00000494268 PODXL2Q9NZ53 605 aa9.97□□□□□ -0.81
MSL3-217ENST00000494268 USP21Q9UK80 565 aa9.97□□□□□ -0.81
MSL3-217ENST00000494268 B3GALT4O96024 378 aa9.96□□□□□ -0.82
MSL3-217ENST00000494268 USP17L7P0C7H9 530 aa9.96□□□□□ -0.82
MSL3-217ENST00000494268 EIF4BP23588 611 aaKnown RBP9.96□□□□□ -0.82
MSL3-217ENST00000494268 GSTT1P30711 240 aa9.96□□□□□ -0.82
MSL3-217ENST00000494268 PSMD2Q13200 908 aa9.96□□□□□ -0.82
MSL3-217ENST00000494268 RGS22Q8NE09 1264 aa9.96□□□□□ -0.82
MSL3-217ENST00000494268 SRCIN1Q9C0H9 1055 aa9.96□□□□□ -0.82
MSL3-217ENST00000494268 C9orf172C9J069 976 aa9.95□□□□□ -0.82
MSL3-217ENST00000494268 ALX3O95076 343 aa9.95□□□□□ -0.82
MSL3-217ENST00000494268 XRCC5P13010 732 aaKnown RBP9.95□□□□□ -0.82
MSL3-217ENST00000494268 TMC4Q7Z404 712 aa9.95□□□□□ -0.82
MSL3-217ENST00000494268 UBASH3BQ8TF42 649 aa9.95□□□□□ -0.82
MSL3-217ENST00000494268 NACC1Q96RE7 527 aa9.95□□□□□ -0.82
MSL3-217ENST00000494268 FAM8A1Q9UBU6 413 aa9.95□□□□□ -0.82
MSL3-217ENST00000494268 ZNF16P17020 682 aaPredicted RBP9.94□□□□□ -0.82
MSL3-217ENST00000494268 RPS26P11Q5JNZ5 115 aaPredicted RBP9.94□□□□□ -0.82
MSL3-217ENST00000494268 SOX17Q9H6I2 414 aaPredicted RBP9.94□□□□□ -0.82
MSL3-217ENST00000494268 CCDC9Q9Y3X0 531 aaKnown RBP9.94□□□□□ -0.82
MSL3-217ENST00000494268 FBXO24O75426 580 aa9.93□□□□□ -0.82
MSL3-217ENST00000494268 ADGRE1Q14246 886 aa9.93□□□□□ -0.82
MSL3-217ENST00000494268 DUOXA2Q1HG44 320 aa9.93□□□□□ -0.82
MSL3-217ENST00000494268 ZNF326Q5BKZ1 582 aaKnown RBP9.93□□□□□ -0.82
MSL3-217ENST00000494268 AGGF1Q8N302 714 aaeCLIP9.93□□□□□ -0.823e-6■■■■□ 22.7
MSL3-217ENST00000494268 MRPL18Q9H0U6 180 aaKnown RBP9.93□□□□□ -0.82
MSL3-217ENST00000494268 MBTPS1Q14703 1052 aa9.92□□□□□ -0.82
MSL3-217ENST00000494268 TPTE2Q6XPS3 522 aa9.92□□□□□ -0.82
MSL3-217ENST00000494268 KIAA1211Q6ZU35 1233 aa9.92□□□□□ -0.82
MSL3-217ENST00000494268 DCAF11Q8TEB1 546 aa9.92□□□□□ -0.82
MSL3-217ENST00000494268 TRIM56Q9BRZ2 755 aaKnown RBP9.92□□□□□ -0.82
MSL3-217ENST00000494268 USP26Q9BXU7 913 aa9.92□□□□□ -0.82
MSL3-217ENST00000494268 NRSN2Q9GZP1 204 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms