RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-212	ENST00000494248	OSGEP	Q9NPF4	335 aa		5	□□□□□ -1.61
PTPN12-212	ENST00000494248	PTPRA	P18433	802 aa		4.99	□□□□□ -1.61
PTPN12-212	ENST00000494248	PLCL1	Q15111	1095 aa		4.99	□□□□□ -1.61
PTPN12-212	ENST00000494248	SMG8	Q8ND04	991 aa	Known RBP	4.99	□□□□□ -1.61
PTPN12-212	ENST00000494248	SLC7A3	Q8WY07	619 aa		4.99	□□□□□ -1.61
PTPN12-212	ENST00000494248	WNT8B	Q93098	351 aa		4.99	□□□□□ -1.61
PTPN12-212	ENST00000494248	SPACA7	Q96KW9	195 aa		4.99	□□□□□ -1.61
PTPN12-212	ENST00000494248	TOX2	Q96NM4	488 aa		4.99	□□□□□ -1.61
PTPN12-212	ENST00000494248	ADAMTS6	Q9UKP5	1117 aa		4.99	□□□□□ -1.61
PTPN12-212	ENST00000494248	UBAP1L	F5GYI3	381 aa		4.98	□□□□□ -1.61
PTPN12-212	ENST00000494248	NFKBIE	O00221	500 aa		4.98	□□□□□ -1.61
PTPN12-212	ENST00000494248	FOXO3	O43524	673 aa		4.98	□□□□□ -1.61
PTPN12-212	ENST00000494248	SCNN1A	P37088	669 aa		4.98	□□□□□ -1.61
PTPN12-212	ENST00000494248	BNIP3	Q12983	259 aa		4.98	□□□□□ -1.61
PTPN12-212	ENST00000494248	PAOX	Q6QHF9	649 aa		4.98	□□□□□ -1.61
PTPN12-212	ENST00000494248	ZNF765	Q7L2R6	523 aa		4.98	□□□□□ -1.61
PTPN12-212	ENST00000494248	C2CD4A	Q8NCU7	369 aa	Predicted RBP	4.98	□□□□□ -1.61
PTPN12-212	ENST00000494248	EZH1	Q92800	747 aa	Predicted RBP	4.98	□□□□□ -1.61
PTPN12-212	ENST00000494248	HHIP	Q96QV1	700 aa		4.98	□□□□□ -1.61
PTPN12-212	ENST00000494248	SAP130	Q9H0E3	1048 aa		4.98	□□□□□ -1.61
PTPN12-212	ENST00000494248	TMPRSS5	Q9H3S3	457 aa		4.98	□□□□□ -1.61
PTPN12-212	ENST00000494248	SUGCT	Q9HAC7	445 aa		4.98	□□□□□ -1.61
PTPN12-212	ENST00000494248	LRRC4C	Q9HCJ2	640 aa		4.98	□□□□□ -1.61
PTPN12-212	ENST00000494248	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	4.98	□□□□□ -1.61
PTPN12-212	ENST00000494248	BIN1	O00499	593 aa		4.97	□□□□□ -1.61
PTPN12-212	ENST00000494248	TRPA1	O75762	1119 aa		4.97	□□□□□ -1.61
PTPN12-212	ENST00000494248	CTSW	P56202	376 aa		4.97	□□□□□ -1.61
PTPN12-212	ENST00000494248	KANK4	Q5T7N3	995 aa	Predicted RBP	4.97	□□□□□ -1.61
PTPN12-212	ENST00000494248	NUTM2G	Q5VZR2	741 aa		4.97	□□□□□ -1.61
PTPN12-212	ENST00000494248	ATG4D	Q86TL0	474 aa	Predicted RBP	4.97	□□□□□ -1.61
PTPN12-212	ENST00000494248	ARX	Q96QS3	562 aa		4.97	□□□□□ -1.61
PTPN12-212	ENST00000494248	SLC38A3	Q99624	504 aa		4.97	□□□□□ -1.61
PTPN12-212	ENST00000494248	MBNL3	Q9NUK0	354 aa	Known RBP	4.97	□□□□□ -1.61
PTPN12-212	ENST00000494248	TFIP11	Q9UBB9	837 aa	Known RBP	4.97	□□□□□ -1.61
PTPN12-212	ENST00000494248	MAFB	Q9Y5Q3	323 aa	Predicted RBP	4.97	□□□□□ -1.61
PTPN12-212	ENST00000494248	LOC100289279	A0A1B0GTE1	492 aa		4.96	□□□□□ -1.62
PTPN12-212	ENST00000494248	SUV39H1	O43463	412 aa		4.96	□□□□□ -1.62
PTPN12-212	ENST00000494248	RNASE1	P07998	156 aa	Known RBP	4.96	□□□□□ -1.62
PTPN12-212	ENST00000494248	ANKMY2	Q8IV38	441 aa		4.96	□□□□□ -1.62
PTPN12-212	ENST00000494248	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	4.96	□□□□□ -1.62
PTPN12-212	ENST00000494248	TMEM40	Q8WWA1	233 aa		4.96	□□□□□ -1.62
PTPN12-212	ENST00000494248	SLC5A6	Q9Y289	635 aa		4.96	□□□□□ -1.62
PTPN12-212	ENST00000494248		A6NJR5	290 aa		4.95	□□□□□ -1.62
PTPN12-212	ENST00000494248	SOX1	O00570	391 aa	Predicted RBP	4.95	□□□□□ -1.62
PTPN12-212	ENST00000494248	LARP1	Q6PKG0	1096 aa	Known RBP	4.95	□□□□□ -1.62
PTPN12-212	ENST00000494248	SOX13	Q9UN79	622 aa		4.95	□□□□□ -1.62
PTPN12-212	ENST00000494248	ZSCAN22	P10073	491 aa	Predicted RBP	4.94	□□□□□ -1.62
PTPN12-212	ENST00000494248	USP11	P51784	963 aa		4.94	□□□□□ -1.62
PTPN12-212	ENST00000494248	C19orf57	Q0VDD7	668 aa		4.94	□□□□□ -1.62
PTPN12-212	ENST00000494248	FKBP5	Q13451	457 aa	Predicted RBP	4.94	□□□□□ -1.62
PTPN12-212	ENST00000494248	TTC39B	Q5VTQ0	682 aa	Predicted RBP	4.94	□□□□□ -1.62
PTPN12-212	ENST00000494248	NCAPG2	Q86XI2	1143 aa		4.94	□□□□□ -1.62
PTPN12-212	ENST00000494248	LRRN4CL	Q8ND94	238 aa		4.94	□□□□□ -1.62
PTPN12-212	ENST00000494248	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	4.94	□□□□□ -1.62
PTPN12-212	ENST00000494248	VTI1A	Q96AJ9	217 aa		4.94	□□□□□ -1.62
PTPN12-212	ENST00000494248	FAM84A	Q96KN4	292 aa		4.94	□□□□□ -1.62
PTPN12-212	ENST00000494248	RC3H2	Q9HBD1	1191 aa	Known RBP	4.94	□□□□□ -1.62
PTPN12-212	ENST00000494248	ABI2	Q9NYB9	513 aa	Predicted RBP	4.94	□□□□□ -1.62
PTPN12-212	ENST00000494248	KANSL3	Q9P2N6	904 aa		4.94	□□□□□ -1.62
PTPN12-212	ENST00000494248	USP17L15	C9J2P7	530 aa		4.93	□□□□□ -1.62
PTPN12-212	ENST00000494248	USP17L10	C9JJH3	530 aa		4.93	□□□□□ -1.62
PTPN12-212	ENST00000494248	USP17L13	C9JLJ4	530 aa		4.93	□□□□□ -1.62
PTPN12-212	ENST00000494248	USP17L12	C9JPN9	530 aa		4.93	□□□□□ -1.62
PTPN12-212	ENST00000494248	USP17L11	C9JVI0	530 aa		4.93	□□□□□ -1.62
PTPN12-212	ENST00000494248	USP17L21	D6R901	530 aa		4.93	□□□□□ -1.62
PTPN12-212	ENST00000494248	USP17L18	D6R9N7	530 aa		4.93	□□□□□ -1.62
PTPN12-212	ENST00000494248	USP17L22	D6RA61	530 aa		4.93	□□□□□ -1.62
PTPN12-212	ENST00000494248	USP17L17	D6RBQ6	530 aa		4.93	□□□□□ -1.62
PTPN12-212	ENST00000494248	USP17L19	D6RCP7	530 aa		4.93	□□□□□ -1.62
PTPN12-212	ENST00000494248	USP17L20	D6RJB6	530 aa		4.93	□□□□□ -1.62
PTPN12-212	ENST00000494248	TNFRSF10B	O14763	440 aa		4.93	□□□□□ -1.62
PTPN12-212	ENST00000494248	NFIC	P08651	508 aa		4.93	□□□□□ -1.62
PTPN12-212	ENST00000494248	CD8B	P10966	210 aa		4.93	□□□□□ -1.62
PTPN12-212	ENST00000494248	FUT4	P22083	530 aa		4.93	□□□□□ -1.62
PTPN12-212	ENST00000494248	CD96	P40200	585 aa		4.93	□□□□□ -1.62
PTPN12-212	ENST00000494248	CABP4	P57796	275 aa		4.93	□□□□□ -1.62
PTPN12-212	ENST00000494248	SOX4	Q06945	474 aa	Predicted RBP	4.93	□□□□□ -1.62
PTPN12-212	ENST00000494248	USP17L24	Q0WX57	530 aa		4.93	□□□□□ -1.62
PTPN12-212	ENST00000494248	ECM1	Q16610	540 aa		4.93	□□□□□ -1.62
PTPN12-212	ENST00000494248	VN1R5	Q7Z5H4	357 aa		4.93	□□□□□ -1.62
PTPN12-212	ENST00000494248	GGN	Q86UU5	652 aa		4.93	□□□□□ -1.62
PTPN12-212	ENST00000494248	LRRC56	Q8IYG6	542 aa	Predicted RBP	4.93	□□□□□ -1.62
PTPN12-212	ENST00000494248	USP26	Q9BXU7	913 aa		4.93	□□□□□ -1.62
PTPN12-212	ENST00000494248	CYP4F12	Q9HCS2	524 aa		4.93	□□□□□ -1.62
PTPN12-212	ENST00000494248	DZANK1	Q9NVP4	752 aa		4.93	□□□□□ -1.62
PTPN12-212	ENST00000494248	CNTN3	Q9P232	1028 aa		4.93	□□□□□ -1.62
PTPN12-212	ENST00000494248	ZNF503-AS2	A6NEH8	195 aa		4.92	□□□□□ -1.62
PTPN12-212	ENST00000494248	DYNC1LI2	O43237	492 aa	Predicted RBP	4.92	□□□□□ -1.62
PTPN12-212	ENST00000494248	KRTAP10-2	P60368	255 aa		4.92	□□□□□ -1.62
PTPN12-212	ENST00000494248	DUSP27	Q5VZP5	1158 aa		4.92	□□□□□ -1.62
PTPN12-212	ENST00000494248	SEZ6L2	Q6UXD5	910 aa		4.92	□□□□□ -1.62
PTPN12-212	ENST00000494248	CAPN12	Q6ZSI9	719 aa		4.92	□□□□□ -1.62
PTPN12-212	ENST00000494248	PIK3R5	Q8WYR1	880 aa		4.92	□□□□□ -1.62
PTPN12-212	ENST00000494248	TMEM63C	Q9P1W3	806 aa		4.92	□□□□□ -1.62
PTPN12-212	ENST00000494248	SALL4	Q9UJQ4	1053 aa		4.92	□□□□□ -1.62
PTPN12-212	ENST00000494248		U3KQE9	123 aa		4.92	□□□□□ -1.62
PTPN12-212	ENST00000494248	ZBTB39	O15060	712 aa		4.91	□□□□□ -1.62
PTPN12-212	ENST00000494248	INHBB	P09529	407 aa		4.91	□□□□□ -1.62
PTPN12-212	ENST00000494248	EXOSC6	Q5RKV6	272 aa	Known RBP	4.91	□□□□□ -1.62
PTPN12-212	ENST00000494248	GPR152	Q8TDT2	470 aa		4.91	□□□□□ -1.62

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