RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 RRP36Q96EU6 259 aaKnown RBP13.36□□□□□ -0.27
COL25A1-204ENST00000494183 LRRC27Q9C0I9 530 aa13.36□□□□□ -0.27
COL25A1-204ENST00000494183 SPDYE3A6NKU9 549 aa13.35□□□□□ -0.27
COL25A1-204ENST00000494183 NEURL1BA8MQ27 555 aa13.35□□□□□ -0.27
COL25A1-204ENST00000494183 SYT1P21579 422 aa13.35□□□□□ -0.27
COL25A1-204ENST00000494183 JAKMIP3Q5VZ66 844 aa13.35□□□□□ -0.27
COL25A1-204ENST00000494183 TTLL7Q6ZT98 887 aa13.35□□□□□ -0.27
COL25A1-204ENST00000494183 DHX58Q96C10 678 aa13.35□□□□□ -0.27
COL25A1-204ENST00000494183 H0YHG0 523 aa13.35□□□□□ -0.27
COL25A1-204ENST00000494183 TAX1BP1Q86VP1 789 aa13.35□□□□□ -0.27
COL25A1-204ENST00000494183 SGSM2O43147 1006 aa13.35□□□□□ -0.27
COL25A1-204ENST00000494183 GSDMDP57764 484 aa13.35□□□□□ -0.27
COL25A1-204ENST00000494183 TAF3Q5VWG9 929 aa13.35□□□□□ -0.27
COL25A1-204ENST00000494183 INTS4Q96HW7 963 aaKnown RBP13.35□□□□□ -0.27
COL25A1-204ENST00000494183 TARBP1Q13395 1621 aaKnown RBP13.35□□□□□ -0.27
COL25A1-204ENST00000494183 MACROD2A1Z1Q3 448 aa13.35□□□□□ -0.27
COL25A1-204ENST00000494183 PLS1Q14651 629 aa13.35□□□□□ -0.27
COL25A1-204ENST00000494183 SEPT7Q16181 437 aaKnown RBP13.35□□□□□ -0.27
COL25A1-204ENST00000494183 ANO6Q4KMQ2 910 aa13.35□□□□□ -0.27
COL25A1-204ENST00000494183 LRSAM1Q6UWE0 723 aa13.35□□□□□ -0.27
COL25A1-204ENST00000494183 INSRP06213 1382 aa13.34□□□□□ -0.27
COL25A1-204ENST00000494183 RTL9Q8NET4 1388 aa13.34□□□□□ -0.27
COL25A1-204ENST00000494183 ASIC1P78348 528 aa13.34□□□□□ -0.27
COL25A1-204ENST00000494183 EDC3Q96F86 508 aaKnown RBP13.34□□□□□ -0.27
COL25A1-204ENST00000494183 TMX1Q9H3N1 280 aa13.34□□□□□ -0.27
COL25A1-204ENST00000494183 APBA3O96018 575 aa13.34□□□□□ -0.27
COL25A1-204ENST00000494183 TNNT1P13805 278 aa13.34□□□□□ -0.27
COL25A1-204ENST00000494183 KIAA0232Q92628 1395 aa13.34□□□□□ -0.27
COL25A1-204ENST00000494183 EIF3JO75822 258 aaKnown RBP13.34□□□□□ -0.27
COL25A1-204ENST00000494183 GNA11P29992 359 aa13.34□□□□□ -0.27
COL25A1-204ENST00000494183 ZAP70P43403 619 aa13.34□□□□□ -0.27
COL25A1-204ENST00000494183 UBASH3AP57075 661 aa13.34□□□□□ -0.27
COL25A1-204ENST00000494183 RMND1Q9NWS8 449 aa13.34□□□□□ -0.27
COL25A1-204ENST00000494183 NEBLO76041 1014 aa13.33□□□□□ -0.27
COL25A1-204ENST00000494183 RPS8P62241 208 aaKnown RBP13.33□□□□□ -0.27
COL25A1-204ENST00000494183 RAB3GAP1Q15042 981 aa13.33□□□□□ -0.27
COL25A1-204ENST00000494183 ARHGEF25Q86VW2 580 aa13.33□□□□□ -0.27
COL25A1-204ENST00000494183 FAM114A1Q8IWE2 563 aa13.33□□□□□ -0.27
COL25A1-204ENST00000494183 TSPYL1Q9H0U9 437 aa13.33□□□□□ -0.27
COL25A1-204ENST00000494183 DNAJC25Q9H1X3 360 aa13.33□□□□□ -0.27
COL25A1-204ENST00000494183 MMRN2Q9H8L6 949 aa13.33□□□□□ -0.27
COL25A1-204ENST00000494183 NEMFO60524 1076 aa13.33□□□□□ -0.28
COL25A1-204ENST00000494183 DTNBO60941 627 aa13.33□□□□□ -0.28
COL25A1-204ENST00000494183 DPP8Q6V1X1 898 aaPredicted RBP13.33□□□□□ -0.28
COL25A1-204ENST00000494183 CCDC150Q8NCX0 1101 aa13.33□□□□□ -0.28
COL25A1-204ENST00000494183 GJA3Q9Y6H8 435 aa13.33□□□□□ -0.28
COL25A1-204ENST00000494183 ANKRD62A6NC57 917 aa13.33□□□□□ -0.28
COL25A1-204ENST00000494183 SLC27A2O14975 620 aa13.33□□□□□ -0.28
COL25A1-204ENST00000494183 ECM2O94769 699 aaPredicted RBP13.33□□□□□ -0.28
COL25A1-204ENST00000494183 MCM7P33993 719 aa13.33□□□□□ -0.28
COL25A1-204ENST00000494183 NF2P35240 595 aa13.33□□□□□ -0.28
COL25A1-204ENST00000494183 PAFAH1B1P43034 410 aa13.33□□□□□ -0.28
COL25A1-204ENST00000494183 KRT79Q5XKE5 535 aa13.33□□□□□ -0.28
COL25A1-204ENST00000494183 CCDC102AQ96A19 550 aa13.33□□□□□ -0.28
COL25A1-204ENST00000494183 AATFQ9NY61 560 aaKnown RBP eCLIP13.33□□□□□ -0.28
COL25A1-204ENST00000494183 AKR1B10O60218 316 aa13.33□□□□□ -0.28
COL25A1-204ENST00000494183 EIF6P56537 245 aaKnown RBP13.33□□□□□ -0.28
COL25A1-204ENST00000494183 WDR66Q8TBY9 1149 aa13.33□□□□□ -0.28
COL25A1-204ENST00000494183 FAM200AQ8TCP9 573 aa13.33□□□□□ -0.28
COL25A1-204ENST00000494183 BICD1Q96G01 975 aa13.33□□□□□ -0.28
COL25A1-204ENST00000494183 NCOA5Q9HCD5 579 aaKnown RBP13.33□□□□□ -0.28
COL25A1-204ENST00000494183 SPAG5Q96R06 1193 aa13.32□□□□□ -0.28
COL25A1-204ENST00000494183 PSMA7O14818 248 aa13.32□□□□□ -0.28
COL25A1-204ENST00000494183 LMOD1P29536 600 aaPredicted RBP13.32□□□□□ -0.28
COL25A1-204ENST00000494183 CCDC174Q6PII3 467 aa13.32□□□□□ -0.28
COL25A1-204ENST00000494183 SPATA31E1Q6ZUB1 1445 aa13.32□□□□□ -0.28
COL25A1-204ENST00000494183 RPS6KB1P23443 525 aa13.32□□□□□ -0.28
COL25A1-204ENST00000494183 KRT2P35908 639 aa13.32□□□□□ -0.28
COL25A1-204ENST00000494183 NOP2P46087 812 aaKnown RBP13.32□□□□□ -0.28
COL25A1-204ENST00000494183 MPHOSPH6Q99547 160 aaKnown RBP13.32□□□□□ -0.28
COL25A1-204ENST00000494183 H0YIN7 160 aa13.32□□□□□ -0.28
COL25A1-204ENST00000494183 UVSSAQ2YD98 709 aa13.32□□□□□ -0.28
COL25A1-204ENST00000494183 LUZP1Q86V48 1076 aa13.32□□□□□ -0.28
COL25A1-204ENST00000494183 ANGEL1Q9UNK9 670 aaKnown RBP13.32□□□□□ -0.28
COL25A1-204ENST00000494183 LEKR1Q6ZMV7 388 aa13.31□□□□□ -0.28
COL25A1-204ENST00000494183 TMCO5BA8MYB1 307 aa13.31□□□□□ -0.28
COL25A1-204ENST00000494183 CASQ1P31415 396 aa13.31□□□□□ -0.28
COL25A1-204ENST00000494183 LARGE2Q8N3Y3 721 aa13.31□□□□□ -0.28
COL25A1-204ENST00000494183 SNX14Q9Y5W7 946 aa13.31□□□□□ -0.28
COL25A1-204ENST00000494183 PARP1P09874 1014 aaKnown RBP13.31□□□□□ -0.28
COL25A1-204ENST00000494183 FAM173BQ6P4H8 233 aa13.31□□□□□ -0.28
COL25A1-204ENST00000494183 BRAPQ7Z569 592 aa13.31□□□□□ -0.28
COL25A1-204ENST00000494183 AOPEPQ8N6M6 819 aa13.31□□□□□ -0.28
COL25A1-204ENST00000494183 SSH3Q8TE77 659 aa13.31□□□□□ -0.28
COL25A1-204ENST00000494183 TMEM87BQ96K49 555 aa13.31□□□□□ -0.28
COL25A1-204ENST00000494183 PLIN2Q99541 437 aa13.31□□□□□ -0.28
COL25A1-204ENST00000494183 TCHPQ9BT92 498 aa13.31□□□□□ -0.28
COL25A1-204ENST00000494183 ASAP1Q9ULH1 1129 aa13.31□□□□□ -0.28
COL25A1-204ENST00000494183 ROBO2Q9HCK4 1378 aa13.31□□□□□ -0.28
COL25A1-204ENST00000494183 DTHD1Q6ZMT9 781 aa13.3□□□□□ -0.28
COL25A1-204ENST00000494183 SPATA5Q8NB90 893 aa13.3□□□□□ -0.28
COL25A1-204ENST00000494183 EAF2Q96CJ1 260 aaPredicted RBP13.3□□□□□ -0.28
COL25A1-204ENST00000494183 CRACR2AQ9BSW2 395 aa13.3□□□□□ -0.28
COL25A1-204ENST00000494183 DNAI2Q9GZS0 605 aa13.3□□□□□ -0.28
COL25A1-204ENST00000494183 GPCPD1Q9NPB8 672 aa13.3□□□□□ -0.28
COL25A1-204ENST00000494183 PUF60Q9UHX1 559 aaKnown RBP13.3□□□□□ -0.28
COL25A1-204ENST00000494183 V9GY48 417 aaPredicted RBP13.3□□□□□ -0.28
COL25A1-204ENST00000494183 ARHGEF5Q12774 1597 aa13.3□□□□□ -0.28
COL25A1-204ENST00000494183 CTNNBL1Q8WYA6 563 aaPredicted RBP13.3□□□□□ -0.28
COL25A1-204ENST00000494183 ZNF532Q9HCE3 1301 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms