RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 TCRBV5S4A2TA0A5A2 114 aa12.68□□□□□ -0.38
CLCN6-208ENST00000494028 UBE3CQ15386 1083 aa12.68□□□□□ -0.38
CLCN6-208ENST00000494028 FOXD4L5Q5VV16 416 aaPredicted RBP12.68□□□□□ -0.38
CLCN6-208ENST00000494028 ZSCAN25Q6NSZ9 544 aa12.68□□□□□ -0.38
CLCN6-208ENST00000494028 KRT27Q7Z3Y8 459 aa12.68□□□□□ -0.38
CLCN6-208ENST00000494028 ANKRD18AQ8IVF6 992 aa12.68□□□□□ -0.38
CLCN6-208ENST00000494028 FOXD4L4Q8WXT5 416 aaPredicted RBP12.68□□□□□ -0.38
CLCN6-208ENST00000494028 ARHGEF1Q92888 912 aaKnown RBP12.68□□□□□ -0.38
CLCN6-208ENST00000494028 PUS7LQ9H0K6 701 aaKnown RBP12.68□□□□□ -0.38
CLCN6-208ENST00000494028 LRRC4BQ9NT99 713 aa12.68□□□□□ -0.38
CLCN6-208ENST00000494028 ZMYM6O95789 1325 aa12.67□□□□□ -0.38
CLCN6-208ENST00000494028 DLEC1Q9Y238 1755 aa12.67□□□□□ -0.38
CLCN6-208ENST00000494028 ZPR1O75312 459 aa12.67□□□□□ -0.38
CLCN6-208ENST00000494028 GJB2P29033 226 aa12.67□□□□□ -0.38
CLCN6-208ENST00000494028 SKOR2Q2VWA4 1001 aaPredicted RBP12.67□□□□□ -0.38
CLCN6-208ENST00000494028 TTLL5Q6EMB2 1281 aa12.67□□□□□ -0.38
CLCN6-208ENST00000494028 FAM196AQ6ZSG2 479 aa12.67□□□□□ -0.38
CLCN6-208ENST00000494028 ILDR2Q71H61 639 aa12.67□□□□□ -0.38
CLCN6-208ENST00000494028 NECAB1Q8N987 351 aa12.67□□□□□ -0.38
CLCN6-208ENST00000494028 SPATA5Q8NB90 893 aa12.67□□□□□ -0.38
CLCN6-208ENST00000494028 CELF1Q92879 486 aaKnown RBP12.67□□□□□ -0.38
CLCN6-208ENST00000494028 LMBRD1Q9NUN5 540 aa12.67□□□□□ -0.38
CLCN6-208ENST00000494028 ZNF532Q9HCE3 1301 aa12.66□□□□□ -0.38
CLCN6-208ENST00000494028 EP400Q96L91 3159 aa12.66□□□□□ -0.38
CLCN6-208ENST00000494028 NAV1Q8NEY1 1877 aa12.66□□□□□ -0.38
CLCN6-208ENST00000494028 FSD2A1L4K1 749 aa12.66□□□□□ -0.38
CLCN6-208ENST00000494028 E7EWF7 191 aa12.66□□□□□ -0.38
CLCN6-208ENST00000494028 IDH1O75874 414 aaKnown RBP12.66□□□□□ -0.38
CLCN6-208ENST00000494028 PHF14O94880 888 aa12.66□□□□□ -0.38
CLCN6-208ENST00000494028 ADRA2BP18089 450 aa12.66□□□□□ -0.38
CLCN6-208ENST00000494028 KLHL40Q2TBA0 621 aa12.66□□□□□ -0.38
CLCN6-208ENST00000494028 NBPF5PQ86XG9 351 aaPredicted RBP12.66□□□□□ -0.38
CLCN6-208ENST00000494028 GTF3C6Q969F1 213 aa12.66□□□□□ -0.38
CLCN6-208ENST00000494028 SETDB2Q96T68 719 aa12.66□□□□□ -0.38
CLCN6-208ENST00000494028 AGXT2Q9BYV1 514 aa12.66□□□□□ -0.38
CLCN6-208ENST00000494028 QSER1Q2KHR3 1735 aa12.65□□□□□ -0.38
CLCN6-208ENST00000494028 DDX60LQ5H9U9 1706 aaKnown RBP12.65□□□□□ -0.38
CLCN6-208ENST00000494028 BAZ2AQ9UIF9 1905 aaKnown RBP12.65□□□□□ -0.38
CLCN6-208ENST00000494028 STX6O43752 255 aa12.65□□□□□ -0.38
CLCN6-208ENST00000494028 HMGB1P09429 215 aaKnown RBP12.65□□□□□ -0.38
CLCN6-208ENST00000494028 ZSCAN22P10073 491 aaPredicted RBP12.65□□□□□ -0.38
CLCN6-208ENST00000494028 Q6ZUG5 572 aa12.65□□□□□ -0.38
CLCN6-208ENST00000494028 NBPF3Q9H094 633 aa12.65□□□□□ -0.38
CLCN6-208ENST00000494028 GZF1Q9H116 711 aaPredicted RBP12.65□□□□□ -0.38
CLCN6-208ENST00000494028 BSDC1Q9NW68 430 aaPredicted RBP12.65□□□□□ -0.38
CLCN6-208ENST00000494028 MTMR6Q9Y217 621 aa12.65□□□□□ -0.38
CLCN6-208ENST00000494028 DTNBO60941 627 aa12.64□□□□□ -0.39
CLCN6-208ENST00000494028 F13A1P00488 732 aa12.64□□□□□ -0.39
CLCN6-208ENST00000494028 SYT1P21579 422 aa12.64□□□□□ -0.39
CLCN6-208ENST00000494028 BCAMP50895 628 aa12.64□□□□□ -0.39
CLCN6-208ENST00000494028 EXOSC10Q01780 885 aaKnown RBP12.64□□□□□ -0.39
CLCN6-208ENST00000494028 UBE4AQ14139 1066 aa12.64□□□□□ -0.39
CLCN6-208ENST00000494028 NFIXQ14938 502 aa12.64□□□□□ -0.39
CLCN6-208ENST00000494028 SLC9C2Q5TAH2 1124 aa12.64□□□□□ -0.39
CLCN6-208ENST00000494028 DHX32Q7L7V1 743 aaKnown RBP12.64□□□□□ -0.39
CLCN6-208ENST00000494028 MB21D2Q8IYB1 491 aaPredicted RBP12.64□□□□□ -0.39
CLCN6-208ENST00000494028 LRRC2Q9BYS8 371 aa12.64□□□□□ -0.39
CLCN6-208ENST00000494028 EPB41L4AQ9HCS5 686 aaPredicted RBP12.64□□□□□ -0.39
CLCN6-208ENST00000494028 CTNNA3Q9UI47 895 aa12.64□□□□□ -0.39
CLCN6-208ENST00000494028 MINPP1Q9UNW1 487 aa12.64□□□□□ -0.39
CLCN6-208ENST00000494028 IRS2Q9Y4H2 1338 aa12.63□□□□□ -0.39
CLCN6-208ENST00000494028 CDK5RAP2Q96SN8 1893 aa12.63□□□□□ -0.39
CLCN6-208ENST00000494028 GTF2E1P29083 439 aaPredicted RBP12.63□□□□□ -0.39
CLCN6-208ENST00000494028 HAND2P61296 217 aa12.63□□□□□ -0.39
CLCN6-208ENST00000494028 IMMTQ16891 758 aaKnown RBP12.63□□□□□ -0.39
CLCN6-208ENST00000494028 SLC27A3Q5K4L6 730 aa12.63□□□□□ -0.39
CLCN6-208ENST00000494028 TBC1D10CQ8IV04 446 aa12.63□□□□□ -0.39
CLCN6-208ENST00000494028 CCDC24Q8N4L8 307 aa12.63□□□□□ -0.39
CLCN6-208ENST00000494028 TMEM87AQ8NBN3 555 aa12.63□□□□□ -0.39
CLCN6-208ENST00000494028 BRF1Q92994 677 aa12.63□□□□□ -0.39
CLCN6-208ENST00000494028 PDS5AQ29RF7 1337 aaKnown RBP12.62□□□□□ -0.39
CLCN6-208ENST00000494028 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.62□□□□□ -0.39
CLCN6-208ENST00000494028 MBD4O95243 580 aa12.62□□□□□ -0.39
CLCN6-208ENST00000494028 FGAP02671 866 aa12.62□□□□□ -0.39
CLCN6-208ENST00000494028 KLRK1P26718 216 aa12.62□□□□□ -0.39
CLCN6-208ENST00000494028 RFC4P35249 363 aa12.62□□□□□ -0.39
CLCN6-208ENST00000494028 GYG1P46976 350 aa12.62□□□□□ -0.39
CLCN6-208ENST00000494028 MAP3K12Q12852 859 aa12.62□□□□□ -0.39
CLCN6-208ENST00000494028 STK3Q13188 491 aa12.62□□□□□ -0.39
CLCN6-208ENST00000494028 MAGEB6Q8N7X4 407 aa12.62□□□□□ -0.39
CLCN6-208ENST00000494028 GPT2Q8TD30 523 aa12.62□□□□□ -0.39
CLCN6-208ENST00000494028 NLRP3Q96P20 1036 aa12.62□□□□□ -0.39
CLCN6-208ENST00000494028 DDX49Q9Y6V7 483 aaKnown RBP12.62□□□□□ -0.39
CLCN6-208ENST00000494028 PNPLA7Q6ZV29 1317 aa12.62□□□□□ -0.39
CLCN6-208ENST00000494028 WDR19Q8NEZ3 1342 aa12.62□□□□□ -0.39
CLCN6-208ENST00000494028 SALL1Q9NSC2 1324 aa12.62□□□□□ -0.39
CLCN6-208ENST00000494028 JAK2O60674 1132 aa12.61□□□□□ -0.39
CLCN6-208ENST00000494028 PFKFB2O60825 505 aa12.61□□□□□ -0.39
CLCN6-208ENST00000494028 GYS1P13807 737 aa12.61□□□□□ -0.39
CLCN6-208ENST00000494028 TM4SF1P30408 202 aa12.61□□□□□ -0.39
CLCN6-208ENST00000494028 ANTXR2P58335 489 aa12.61□□□□□ -0.39
CLCN6-208ENST00000494028 APOBRQ0VD83 1088 aa12.61□□□□□ -0.39
CLCN6-208ENST00000494028 SCRN1Q12765 414 aa12.61□□□□□ -0.39
CLCN6-208ENST00000494028 TRAPPC3LQ5T215 181 aa12.61□□□□□ -0.39
CLCN6-208ENST00000494028 PRR5LQ6MZQ0 368 aa12.61□□□□□ -0.39
CLCN6-208ENST00000494028 TPTE2Q6XPS3 522 aa12.61□□□□□ -0.39
CLCN6-208ENST00000494028 CDC37L1Q7L3B6 337 aa12.61□□□□□ -0.39
CLCN6-208ENST00000494028 FBXL16Q8N461 479 aa12.61□□□□□ -0.39
CLCN6-208ENST00000494028 CNBD1Q8NA66 436 aa12.61□□□□□ -0.39
CLCN6-208ENST00000494028 STRBPQ96SI9 672 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms