RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 DNAJB12Q9NXW2 375 aaKnown RBP9.31□□□□□ -0.92
SMC2-205ENST00000493955 GPR25O00155 361 aa9.31□□□□□ -0.92
SMC2-205ENST00000493955 SYT9Q86SS6 491 aa9.31□□□□□ -0.92
SMC2-205ENST00000493955 PMFBP1Q8TBY8 1022 aa9.31□□□□□ -0.92
SMC2-205ENST00000493955 SEC31BQ9NQW1 1179 aa9.31□□□□□ -0.92
SMC2-205ENST00000493955 TLR6Q9Y2C9 796 aa9.31□□□□□ -0.92
SMC2-205ENST00000493955 SUPT16HQ9Y5B9 1047 aaKnown RBP9.31□□□□□ -0.92
SMC2-205ENST00000493955 CDC14CA4D256 554 aa9.3□□□□□ -0.92
SMC2-205ENST00000493955 SMNDC1O75940 238 aaKnown RBP eCLIP9.3□□□□□ -0.92
SMC2-205ENST00000493955 EIF2AK2P19525 551 aaKnown RBP9.3□□□□□ -0.92
SMC2-205ENST00000493955 CANXP27824 592 aaKnown RBP9.3□□□□□ -0.92
SMC2-205ENST00000493955 TBC1D8BQ0IIM8 1120 aa9.3□□□□□ -0.92
SMC2-205ENST00000493955 TTBK2Q6IQ55 1244 aa9.3□□□□□ -0.92
SMC2-205ENST00000493955 FBXL19Q6PCT2 694 aa9.3□□□□□ -0.92
SMC2-205ENST00000493955 EAF1Q96JC9 268 aaPredicted RBP9.3□□□□□ -0.92
SMC2-205ENST00000493955 NT5C1AQ9BXI3 368 aa9.3□□□□□ -0.92
SMC2-205ENST00000493955 GPN3Q9UHW5 284 aaPredicted RBP9.3□□□□□ -0.92
SMC2-205ENST00000493955 SIN3BO75182 1162 aa9.29□□□□□ -0.92
SMC2-205ENST00000493955 LMNB2Q03252 620 aa9.29□□□□□ -0.92
SMC2-205ENST00000493955 FAM160A1Q05DH4 1040 aa9.29□□□□□ -0.92
SMC2-205ENST00000493955 FAAP100Q0VG06 881 aa9.29□□□□□ -0.92
SMC2-205ENST00000493955 CCDC144BQ3MJ40 725 aa9.29□□□□□ -0.92
SMC2-205ENST00000493955 AGMOQ6ZNB7 445 aa9.29□□□□□ -0.92
SMC2-205ENST00000493955 NOP9Q86U38 636 aaKnown RBP9.29□□□□□ -0.92
SMC2-205ENST00000493955 IRF7Q92985 503 aa9.29□□□□□ -0.92
SMC2-205ENST00000493955 PF4P02776 101 aa9.28□□□□□ -0.92
SMC2-205ENST00000493955 SSBP05455 408 aaKnown RBP eCLIP9.28□□□□□ -0.92
SMC2-205ENST00000493955 GARTP22102 1010 aa9.28□□□□□ -0.92
SMC2-205ENST00000493955 NASPP49321 788 aaPredicted RBP9.28□□□□□ -0.92
SMC2-205ENST00000493955 RPS26P62854 115 aaKnown RBP9.28□□□□□ -0.92
SMC2-205ENST00000493955 CAMK2GQ13555 558 aaPredicted RBP9.28□□□□□ -0.92
SMC2-205ENST00000493955 SNAP47Q5SQN1 464 aa9.28□□□□□ -0.92
SMC2-205ENST00000493955 GIMAP6Q6P9H5 292 aa9.28□□□□□ -0.92
SMC2-205ENST00000493955 BSNDQ8WZ55 320 aa9.28□□□□□ -0.92
SMC2-205ENST00000493955 POP1Q99575 1024 aaKnown RBP9.28□□□□□ -0.92
SMC2-205ENST00000493955 MUC3BQ9H195 1237 aa9.28□□□□□ -0.92
SMC2-205ENST00000493955 CLEC4MQ9H2X3 399 aaPredicted RBP9.28□□□□□ -0.92
SMC2-205ENST00000493955 TMEM39AQ9NV64 488 aa9.28□□□□□ -0.92
SMC2-205ENST00000493955 EFR3BQ9Y2G0 817 aa9.28□□□□□ -0.92
SMC2-205ENST00000493955 GREM1O60565 184 aa9.27□□□□□ -0.93
SMC2-205ENST00000493955 PPFIA3O75145 1194 aa9.27□□□□□ -0.93
SMC2-205ENST00000493955 PAGE1O75459 146 aa9.27□□□□□ -0.93
SMC2-205ENST00000493955 BMP4P12644 408 aa9.27□□□□□ -0.93
SMC2-205ENST00000493955 COL9A2Q14055 689 aaPredicted RBP9.27□□□□□ -0.93
SMC2-205ENST00000493955 PCNX4Q63HM2 1172 aa9.27□□□□□ -0.93
SMC2-205ENST00000493955 CEP135Q66GS9 1140 aa9.27□□□□□ -0.93
SMC2-205ENST00000493955 AVENQ9NQS1 362 aaPredicted RBP9.27□□□□□ -0.93
SMC2-205ENST00000493955 STRIP2Q9ULQ0 834 aa9.27□□□□□ -0.93
SMC2-205ENST00000493955 TFE3P19532 575 aaPredicted RBP9.26□□□□□ -0.93
SMC2-205ENST00000493955 SOX9P48436 509 aa9.26□□□□□ -0.93
SMC2-205ENST00000493955 PPP2R3AQ06190 1150 aa9.26□□□□□ -0.93
SMC2-205ENST00000493955 SV2AQ7L0J3 742 aa9.26□□□□□ -0.93
SMC2-205ENST00000493955 FAM35AQ86V20 835 aa9.26□□□□□ -0.93
SMC2-205ENST00000493955 VWA5B2Q8N398 1253 aa9.26□□□□□ -0.93
SMC2-205ENST00000493955 GOLM1Q8NBJ4 401 aa9.26□□□□□ -0.93
SMC2-205ENST00000493955 TNFRSF25Q93038 417 aa9.26□□□□□ -0.93
SMC2-205ENST00000493955 PLD4Q96BZ4 506 aa9.26□□□□□ -0.93
SMC2-205ENST00000493955 GINM1Q9NU53 330 aa9.26□□□□□ -0.93
SMC2-205ENST00000493955 C2CD2LO14523 706 aa9.25□□□□□ -0.93
SMC2-205ENST00000493955 CPB1P15086 417 aa9.25□□□□□ -0.93
SMC2-205ENST00000493955 PCBP4P57723 403 aaKnown RBP9.25□□□□□ -0.93
SMC2-205ENST00000493955 APOBRQ0VD83 1088 aa9.25□□□□□ -0.93
SMC2-205ENST00000493955 TRIM42Q8IWZ5 723 aa9.25□□□□□ -0.93
SMC2-205ENST00000493955 CKAP2LQ8IYA6 745 aa9.25□□□□□ -0.93
SMC2-205ENST00000493955 MICALL1Q8N3F8 863 aa9.25□□□□□ -0.93
SMC2-205ENST00000493955 UBP1Q9NZI7 540 aa9.25□□□□□ -0.93
SMC2-205ENST00000493955 SLC6A14Q9UN76 642 aa9.25□□□□□ -0.93
SMC2-205ENST00000493955 SAMM50Q9Y512 469 aa9.25□□□□□ -0.93
SMC2-205ENST00000493955 LMNB1P20700 586 aa9.24□□□□□ -0.93
SMC2-205ENST00000493955 NPAS3Q8IXF0 933 aa9.24□□□□□ -0.93
SMC2-205ENST00000493955 NANOS1Q8WY41 292 aaKnown RBP9.24□□□□□ -0.93
SMC2-205ENST00000493955 OSBPL2Q9H1P3 480 aa9.24□□□□□ -0.93
SMC2-205ENST00000493955 ZSWIM4Q9H7M6 989 aa9.24□□□□□ -0.93
SMC2-205ENST00000493955 ZNF408Q9H9D4 720 aa9.24□□□□□ -0.93
SMC2-205ENST00000493955 CADPSQ9ULU8 1353 aa9.23□□□□□ -0.93
SMC2-205ENST00000493955 H3BM21 787 aa9.23□□□□□ -0.93
SMC2-205ENST00000493955 B3GALT4O96024 378 aa9.23□□□□□ -0.93
SMC2-205ENST00000493955 PTPRAP18433 802 aa9.23□□□□□ -0.93
SMC2-205ENST00000493955 ZNF157P51786 506 aaPredicted RBP9.23□□□□□ -0.93
SMC2-205ENST00000493955 PCDH1Q08174 1060 aa9.23□□□□□ -0.93
SMC2-205ENST00000493955 NBPF6Q5VWK0 638 aa9.23□□□□□ -0.93
SMC2-205ENST00000493955 FAM196AQ6ZSG2 479 aa9.23□□□□□ -0.93
SMC2-205ENST00000493955 NBPF4Q96M43 638 aa9.23□□□□□ -0.93
SMC2-205ENST00000493955 PUS7Q96PZ0 661 aaKnown RBP9.23□□□□□ -0.93
SMC2-205ENST00000493955 NAGPAQ9UK23 515 aa9.23□□□□□ -0.93
SMC2-205ENST00000493955 SOX13Q9UN79 622 aa9.23□□□□□ -0.93
SMC2-205ENST00000493955 MX2P20592 715 aa9.22□□□□□ -0.93
SMC2-205ENST00000493955 ADH7P40394 386 aa9.22□□□□□ -0.93
SMC2-205ENST00000493955 CRKP46108 304 aa9.22□□□□□ -0.93
SMC2-205ENST00000493955 PERM1Q5SV97 790 aa9.22□□□□□ -0.93
SMC2-205ENST00000493955 ELMSAN1Q6PJG2 1045 aa9.22□□□□□ -0.93
SMC2-205ENST00000493955 CCDC84Q86UT8 332 aaPredicted RBP9.22□□□□□ -0.93
SMC2-205ENST00000493955 NKD1Q969G9 470 aa9.22□□□□□ -0.93
SMC2-205ENST00000493955 TMA7Q9Y2S6 64 aaKnown RBP9.22□□□□□ -0.93
SMC2-205ENST00000493955 ERBB4Q15303 1308 aa9.22□□□□□ -0.93
SMC2-205ENST00000493955 ROBO2Q9HCK4 1378 aa9.22□□□□□ -0.93
SMC2-205ENST00000493955 ARAFP10398 606 aa9.22□□□□□ -0.93
SMC2-205ENST00000493955 NME2P22392 152 aa9.22□□□□□ -0.93
SMC2-205ENST00000493955 ADH6P28332 368 aa9.22□□□□□ -0.93
SMC2-205ENST00000493955 SUZ12Q15022 739 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms