RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 CALM1P0DP23 149 aa8.83□□□□□ -1
BRCA1-221ENST00000493795 CALM2P0DP24 149 aa8.83□□□□□ -1
BRCA1-221ENST00000493795 CALM3P0DP25 149 aa8.83□□□□□ -1
BRCA1-221ENST00000493795 IFIT1BQ5T764 474 aaKnown RBP8.83□□□□□ -1
BRCA1-221ENST00000493795 PSPC1Q8WXF1 523 aaKnown RBP8.83□□□□□ -1
BRCA1-221ENST00000493795 ZMAT2Q96NC0 199 aaKnown RBP8.83□□□□□ -1
BRCA1-221ENST00000493795 RTL1A6NKG5 1358 aa8.83□□□□□ -1
BRCA1-221ENST00000493795 GABPAQ06546 454 aa8.83□□□□□ -1
BRCA1-221ENST00000493795 BIRC2Q13490 618 aa8.83□□□□□ -1
BRCA1-221ENST00000493795 CFAP70Q5T0N1 1121 aa8.83□□□□□ -1
BRCA1-221ENST00000493795 LGSNQ5TDP6 509 aa8.83□□□□□ -1
BRCA1-221ENST00000493795 KRT79Q5XKE5 535 aa8.83□□□□□ -1
BRCA1-221ENST00000493795 RNF34Q969K3 372 aa8.83□□□□□ -1
BRCA1-221ENST00000493795 HAUS2Q9NVX0 235 aa8.83□□□□□ -1
BRCA1-221ENST00000493795 ABCC8Q09428 1581 aa8.83□□□□□ -1
BRCA1-221ENST00000493795 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.83□□□□□ -1
BRCA1-221ENST00000493795 ZBTB43O43298 467 aa8.83□□□□□ -1
BRCA1-221ENST00000493795 ZNF710Q8N1W2 664 aa8.83□□□□□ -1
BRCA1-221ENST00000493795 CNNM2Q9H8M5 875 aa8.83□□□□□ -1
BRCA1-221ENST00000493795 PPANQ9NQ55 473 aaKnown RBP8.83□□□□□ -1
BRCA1-221ENST00000493795 ECHDC1Q9NTX5 307 aa8.83□□□□□ -1
BRCA1-221ENST00000493795 KLF18A0A0U1RQI7 1052 aa8.82□□□□□ -1
BRCA1-221ENST00000493795 STX10O60499 249 aa8.82□□□□□ -1
BRCA1-221ENST00000493795 RTN1Q16799 776 aa8.82□□□□□ -1
BRCA1-221ENST00000493795 DHX29Q7Z478 1369 aaKnown RBP8.82□□□□□ -1
BRCA1-221ENST00000493795 UQCRFS1P1P0C7P4 283 aa8.82□□□□□ -1
BRCA1-221ENST00000493795 NAPAP54920 295 aa8.82□□□□□ -1
BRCA1-221ENST00000493795 HAND2P61296 217 aa8.82□□□□□ -1
BRCA1-221ENST00000493795 WDR44Q5JSH3 913 aa8.82□□□□□ -1
BRCA1-221ENST00000493795 DNAJC8O75937 253 aaPredicted RBP8.82□□□□□ -1
BRCA1-221ENST00000493795 KRT3P12035 628 aa8.82□□□□□ -1
BRCA1-221ENST00000493795 IRX5P78411 483 aaPredicted RBP8.82□□□□□ -1
BRCA1-221ENST00000493795 TUBB2AQ13885 445 aa8.82□□□□□ -1
BRCA1-221ENST00000493795 VWA3BQ502W6 1294 aa8.82□□□□□ -1
BRCA1-221ENST00000493795 DHX58Q96C10 678 aa8.82□□□□□ -1
BRCA1-221ENST00000493795 TUBB2BQ9BVA1 445 aa8.82□□□□□ -1
BRCA1-221ENST00000493795 SPOPO43791 374 aa8.82□□□□□ -1
BRCA1-221ENST00000493795 CLCN1P35523 988 aa8.82□□□□□ -1
BRCA1-221ENST00000493795 LIN9Q5TKA1 542 aa8.82□□□□□ -1
BRCA1-221ENST00000493795 SYT10Q6XYQ8 523 aa8.82□□□□□ -1
BRCA1-221ENST00000493795 DAPK3O43293 454 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 KRT5P13647 590 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 RPL13P26373 211 aaKnown RBP8.81□□□□□ -1
BRCA1-221ENST00000493795 PPP2R3AQ06190 1150 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 RAPGEF1Q13905 1077 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 CNGA4Q8IV77 575 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 DNAJC25Q9H1X3 360 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 Q9H521 79 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 FAN1Q9Y2M0 1017 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 CUX1P39880 1505 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 NBPF6Q5VWK0 638 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 UBL4BQ8N7F7 174 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 MRRFQ96E11 262 aaKnown RBP8.81□□□□□ -1
BRCA1-221ENST00000493795 NBPF4Q96M43 638 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 PLCB1Q9NQ66 1216 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 ZNF219Q9P2Y4 722 aaPredicted RBP8.81□□□□□ -1
BRCA1-221ENST00000493795 RRS1Q15050 365 aaKnown RBP8.81□□□□□ -1
BRCA1-221ENST00000493795 TAF7Q15545 349 aaPredicted RBP8.81□□□□□ -1
BRCA1-221ENST00000493795 PHLDB3Q6NSJ2 640 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 C8orf74Q6P047 294 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 RUFY4Q6ZNE9 571 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 PDCD7Q8N8D1 485 aaKnown RBP8.81□□□□□ -1
BRCA1-221ENST00000493795 KCNH5Q8NCM2 988 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 ESR2Q92731 530 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 XAB2Q9HCS7 855 aaKnown RBP8.81□□□□□ -1
BRCA1-221ENST00000493795 STX8Q9UNK0 236 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 NACADO15069 1562 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 GOLGA6CA6NDK9 693 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 SPECC1L-ADORA2AF8WAN1 911 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 GOLGA6DP0CG33 693 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 RASSF2P50749 326 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 SLFN5Q08AF3 891 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 AKNAD1Q5T1N1 836 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 PROCA1Q8NCQ7 364 aaPredicted RBP8.81□□□□□ -1
BRCA1-221ENST00000493795 CXorf38Q8TB03 319 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 GOLGA6AQ9NYA3 693 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 FRMD4BQ9Y2L6 1034 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 SPDYE3A6NKU9 549 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 PTCD1O75127 700 aaKnown RBP8.81□□□□□ -1
BRCA1-221ENST00000493795 TMPOP42166 694 aaKnown RBP8.81□□□□□ -1
BRCA1-221ENST00000493795 DIXDC1Q155Q3 683 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 MUM1Q2TAK8 710 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 SLC4A8Q2Y0W8 1093 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 IFT20Q8IY31 132 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 ZKSCAN5Q9Y2L8 839 aa8.81□□□□□ -1
BRCA1-221ENST00000493795 PNMA8AQ86V59 439 aaPredicted RBP8.8□□□□□ -1
BRCA1-221ENST00000493795 SLC12A5Q9H2X9 1139 aa8.8□□□□□ -1
BRCA1-221ENST00000493795 DDX21Q9NR30 783 aaKnown RBP eCLIP8.8□□□□□ -1
BRCA1-221ENST00000493795 FAF1Q9UNN5 650 aaPredicted RBP8.8□□□□□ -1
BRCA1-221ENST00000493795 CNPY2Q9Y2B0 182 aa8.8□□□□□ -1
BRCA1-221ENST00000493795 NOC2LQ9Y3T9 749 aaKnown RBP8.8□□□□□ -1
BRCA1-221ENST00000493795 ATP6V1E1P36543 226 aa8.8□□□□□ -1
BRCA1-221ENST00000493795 COG7P83436 770 aa8.8□□□□□ -1
BRCA1-221ENST00000493795 AMOTQ4VCS5 1084 aa8.8□□□□□ -1
BRCA1-221ENST00000493795 NSMCE1Q8WV22 266 aa8.8□□□□□ -1
BRCA1-221ENST00000493795 GTF3C6Q969F1 213 aa8.8□□□□□ -1
BRCA1-221ENST00000493795 ATAD2Q6PL18 1390 aa8.8□□□□□ -1
BRCA1-221ENST00000493795 TRIM75PA6NK02 468 aa8.8□□□□□ -1
BRCA1-221ENST00000493795 EPB41P11171 864 aaKnown RBP8.8□□□□□ -1
BRCA1-221ENST00000493795 TNFAIP3P21580 790 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms