RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 SIPA1L3O60292 1781 aaPredicted RBP12.28□□□□□ -0.44
PRPF3-206ENST00000493553 SCN11AQ9UI33 1791 aa12.28□□□□□ -0.44
PRPF3-206ENST00000493553 EPB41L2O43491 1005 aaKnown RBP12.28□□□□□ -0.44
PRPF3-206ENST00000493553 REC8O95072 547 aa12.28□□□□□ -0.44
PRPF3-206ENST00000493553 BANK1Q8NDB2 785 aa12.28□□□□□ -0.44
PRPF3-206ENST00000493553 ZNF496Q96IT1 587 aaPredicted RBP12.28□□□□□ -0.44
PRPF3-206ENST00000493553 STAP2Q9UGK3 403 aa12.28□□□□□ -0.44
PRPF3-206ENST00000493553 ADCY9O60503 1353 aa12.28□□□□□ -0.44
PRPF3-206ENST00000493553 TOM1O60784 492 aa12.27□□□□□ -0.45
PRPF3-206ENST00000493553 MFAP1P55081 439 aaKnown RBP12.27□□□□□ -0.45
PRPF3-206ENST00000493553 GPATCH3Q96I76 525 aa12.27□□□□□ -0.45
PRPF3-206ENST00000493553 KLF16Q9BXK1 252 aaPredicted RBP12.27□□□□□ -0.45
PRPF3-206ENST00000493553 SENP2Q9HC62 589 aa12.27□□□□□ -0.45
PRPF3-206ENST00000493553 RGPD5Q99666 1765 aa12.27□□□□□ -0.45
PRPF3-206ENST00000493553 COL15A1P39059 1388 aa12.27□□□□□ -0.45
PRPF3-206ENST00000493553 GRM8O00222 908 aa12.26□□□□□ -0.45
PRPF3-206ENST00000493553 SOCS7O14512 581 aa12.26□□□□□ -0.45
PRPF3-206ENST00000493553 SRGAP3O43295 1099 aa12.26□□□□□ -0.45
PRPF3-206ENST00000493553 TIMP2P16035 220 aa12.26□□□□□ -0.45
PRPF3-206ENST00000493553 PDE1AP54750 535 aa12.26□□□□□ -0.45
PRPF3-206ENST00000493553 VASH1Q7L8A9 365 aaPredicted RBP12.26□□□□□ -0.45
PRPF3-206ENST00000493553 PPP1R42Q7Z4L9 355 aa12.26□□□□□ -0.45
PRPF3-206ENST00000493553 OCSTAMPQ9BR26 566 aa12.26□□□□□ -0.45
PRPF3-206ENST00000493553 METTL22Q9BUU2 404 aaPredicted RBP12.26□□□□□ -0.45
PRPF3-206ENST00000493553 STRN4Q9NRL3 753 aa12.26□□□□□ -0.45
PRPF3-206ENST00000493553 THRAP3Q9Y2W1 955 aaKnown RBP12.26□□□□□ -0.45
PRPF3-206ENST00000493553 SURF6O75683 361 aaKnown RBP12.25□□□□□ -0.45
PRPF3-206ENST00000493553 NR3C2P08235 984 aa12.25□□□□□ -0.45
PRPF3-206ENST00000493553 MX1P20591 662 aa12.25□□□□□ -0.45
PRPF3-206ENST00000493553 WDR4P57081 412 aaKnown RBP12.25□□□□□ -0.45
PRPF3-206ENST00000493553 TBC1D9Q6ZT07 1266 aa12.25□□□□□ -0.45
PRPF3-206ENST00000493553 ZBTB33Q86T24 672 aa12.25□□□□□ -0.45
PRPF3-206ENST00000493553 PLBD2Q8NHP8 589 aa12.25□□□□□ -0.45
PRPF3-206ENST00000493553 SNX21Q969T3 373 aa12.25□□□□□ -0.45
PRPF3-206ENST00000493553 TMOD3Q9NYL9 352 aa12.25□□□□□ -0.45
PRPF3-206ENST00000493553 CDV3Q9UKY7 258 aaKnown RBP12.25□□□□□ -0.45
PRPF3-206ENST00000493553 ERC2O15083 957 aa12.24□□□□□ -0.45
PRPF3-206ENST00000493553 COL14A1Q05707 1796 aaKnown RBP12.24□□□□□ -0.45
PRPF3-206ENST00000493553 SLC39A6Q13433 755 aa12.24□□□□□ -0.45
PRPF3-206ENST00000493553 OS9Q13438 667 aaPredicted RBP12.24□□□□□ -0.45
PRPF3-206ENST00000493553 HSCBQ8IWL3 235 aa12.24□□□□□ -0.45
PRPF3-206ENST00000493553 XAGE3Q8WTP9 111 aa12.24□□□□□ -0.45
PRPF3-206ENST00000493553 KIFC2Q96AC6 838 aa12.24□□□□□ -0.45
PRPF3-206ENST00000493553 GJD4Q96KN9 370 aaPredicted RBP12.24□□□□□ -0.45
PRPF3-206ENST00000493553 TRIM47Q96LD4 638 aa12.24□□□□□ -0.45
PRPF3-206ENST00000493553 BTG4Q9NY30 223 aa12.24□□□□□ -0.45
PRPF3-206ENST00000493553 TTC41PQ6P2S7 1318 aa12.23□□□□□ -0.45
PRPF3-206ENST00000493553 PNMA6EA0A0J9YXQ4 647 aa12.23□□□□□ -0.45
PRPF3-206ENST00000493553 STARD3NLO95772 234 aa12.23□□□□□ -0.45
PRPF3-206ENST00000493553 FSHRP23945 695 aa12.23□□□□□ -0.45
PRPF3-206ENST00000493553 COPS6Q7L5N1 327 aa12.23□□□□□ -0.45
PRPF3-206ENST00000493553 CLASRPQ8N2M8 674 aaKnown RBP12.23□□□□□ -0.45
PRPF3-206ENST00000493553 SLC10A4Q96EP9 437 aa12.23□□□□□ -0.45
PRPF3-206ENST00000493553 EXOC6BQ9Y2D4 811 aa12.23□□□□□ -0.45
PRPF3-206ENST00000493553 ABCA3Q99758 1704 aa12.23□□□□□ -0.45
PRPF3-206ENST00000493553 COL22A1Q8NFW1 1626 aaPredicted RBP12.22□□□□□ -0.45
PRPF3-206ENST00000493553 EXOC5O00471 708 aa12.22□□□□□ -0.45
PRPF3-206ENST00000493553 NBPF7P0C2Y1 421 aaPredicted RBP12.22□□□□□ -0.45
PRPF3-206ENST00000493553 SDSP20132 328 aa12.22□□□□□ -0.45
PRPF3-206ENST00000493553 MCCP23508 829 aa12.22□□□□□ -0.45
PRPF3-206ENST00000493553 G3BP1Q13283 466 aaKnown RBP eCLIP12.22□□□□□ -0.45
PRPF3-206ENST00000493553 GCKRQ14397 625 aa12.22□□□□□ -0.45
PRPF3-206ENST00000493553 PROSER3Q2NL68 480 aa12.22□□□□□ -0.45
PRPF3-206ENST00000493553 TRIM46Q7Z4K8 759 aa12.22□□□□□ -0.45
PRPF3-206ENST00000493553 RHPN1Q8TCX5 695 aa12.22□□□□□ -0.45
PRPF3-206ENST00000493553 DDX54Q8TDD1 881 aaKnown RBP12.22□□□□□ -0.45
PRPF3-206ENST00000493553 ZNF775Q96BV0 537 aaPredicted RBP12.22□□□□□ -0.45
PRPF3-206ENST00000493553 TNS2Q63HR2 1409 aa12.21□□□□□ -0.45
PRPF3-206ENST00000493553 NEURL1BA8MQ27 555 aa12.21□□□□□ -0.45
PRPF3-206ENST00000493553 APBB1O00213 710 aa12.21□□□□□ -0.45
PRPF3-206ENST00000493553 BMP1P13497 986 aa12.21□□□□□ -0.45
PRPF3-206ENST00000493553 GSPT1P15170 499 aaKnown RBP12.21□□□□□ -0.45
PRPF3-206ENST00000493553 AIMP1Q12904 312 aaKnown RBP12.21□□□□□ -0.45
PRPF3-206ENST00000493553 RABEP1Q15276 862 aa12.21□□□□□ -0.45
PRPF3-206ENST00000493553 TICAM2Q86XR7 235 aa12.21□□□□□ -0.45
PRPF3-206ENST00000493553 ADAM32Q8TC27 787 aa12.21□□□□□ -0.45
PRPF3-206ENST00000493553 SALL3Q9BXA9 1300 aa12.2□□□□□ -0.46
PRPF3-206ENST00000493553 USP42Q9H9J4 1324 aaKnown RBP12.2□□□□□ -0.46
PRPF3-206ENST00000493553 LTBP4Q8N2S1 1624 aa12.2□□□□□ -0.46
PRPF3-206ENST00000493553 GLRX3O76003 335 aaKnown RBP12.2□□□□□ -0.46
PRPF3-206ENST00000493553 ZIC2O95409 532 aaPredicted RBP12.2□□□□□ -0.46
PRPF3-206ENST00000493553 ANXA1P04083 346 aa12.2□□□□□ -0.46
PRPF3-206ENST00000493553 MYL6BP14649 208 aa12.2□□□□□ -0.46
PRPF3-206ENST00000493553 USP16Q9Y5T5 823 aa12.2□□□□□ -0.46
PRPF3-206ENST00000493553 HIP1O00291 1037 aa12.19□□□□□ -0.46
PRPF3-206ENST00000493553 SMARCA5O60264 1052 aaPredicted RBP12.19□□□□□ -0.46
PRPF3-206ENST00000493553 TRIM28Q13263 835 aaKnown RBP12.19□□□□□ -0.46
PRPF3-206ENST00000493553 LRP10Q7Z4F1 713 aa12.19□□□□□ -0.46
PRPF3-206ENST00000493553 C16orf71Q8IYS4 520 aaPredicted RBP12.19□□□□□ -0.46
PRPF3-206ENST00000493553 CCDC191Q8NCU4 936 aa12.19□□□□□ -0.46
PRPF3-206ENST00000493553 RUFY2Q8WXA3 655 aa12.19□□□□□ -0.46
PRPF3-206ENST00000493553 ITPKCQ96DU7 683 aa12.19□□□□□ -0.46
PRPF3-206ENST00000493553 DISP2A7MBM2 1401 aa12.19□□□□□ -0.46
PRPF3-206ENST00000493553 LRP6O75581 1613 aa12.19□□□□□ -0.46
PRPF3-206ENST00000493553 IFIT2P09913 472 aaKnown RBP12.18□□□□□ -0.46
PRPF3-206ENST00000493553 SNRPBP14678 240 aaKnown RBP12.18□□□□□ -0.46
PRPF3-206ENST00000493553 ANAPC15P60006 121 aa12.18□□□□□ -0.46
PRPF3-206ENST00000493553 HSP90AB3PQ58FF7 597 aa12.18□□□□□ -0.46
PRPF3-206ENST00000493553 CCDC116Q8IYX3 515 aa12.18□□□□□ -0.46
PRPF3-206ENST00000493553 CNTROBQ8N137 903 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms