RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 ANO1Q5XXA6 986 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 CPLX2Q6PUV4 134 aaKnown RBP4.99□□□□□ -1.61
BRCA1-220ENST00000492859 LVRNQ6Q4G3 990 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 CDC37L1Q7L3B6 337 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 MCM10Q7L590 875 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 SAMD7Q7Z3H4 446 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 ELOA2Q8IYF1 753 aaPredicted RBP4.99□□□□□ -1.61
BRCA1-220ENST00000492859 IFNL2Q8IZJ0 200 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 RGL4Q8IZJ4 473 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 OR8H2Q8N162 312 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 UHMK1Q8TAS1 419 aaKnown RBP4.99□□□□□ -1.61
BRCA1-220ENST00000492859 JPH3Q8WXH2 748 aaPredicted RBP4.99□□□□□ -1.61
BRCA1-220ENST00000492859 N4BP2L2Q92802 583 aaPredicted RBP4.99□□□□□ -1.61
BRCA1-220ENST00000492859 ZNF594Q96JF6 807 aaPredicted RBP4.99□□□□□ -1.61
BRCA1-220ENST00000492859 SRPK1Q96SB4 655 aaKnown RBP4.99□□□□□ -1.61
BRCA1-220ENST00000492859 LZTS2Q9BRK4 669 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 C2orf49Q9BVC5 232 aaPredicted RBP4.99□□□□□ -1.61
BRCA1-220ENST00000492859 SRRTQ9BXP5 876 aaKnown RBP4.99□□□□□ -1.61
BRCA1-220ENST00000492859 NUCKS1Q9H1E3 243 aaKnown RBP4.99□□□□□ -1.61
BRCA1-220ENST00000492859 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.99□□□□□ -1.61
BRCA1-220ENST00000492859 TRMT1Q9NXH9 659 aaKnown RBP4.99□□□□□ -1.61
BRCA1-220ENST00000492859 CDV3Q9UKY7 258 aaKnown RBP4.99□□□□□ -1.61
BRCA1-220ENST00000492859 SPG7Q9UQ90 795 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 PCDHGB7Q9Y5F8 929 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 SMTNL1A8MU46 457 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 ICMTO60725 284 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 AP1G2O75843 785 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 TPM3P06753 285 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 ZNF853P0CG23 659 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 IDEP14735 1019 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 KIF5BP33176 963 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 UBA7P41226 1012 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 HALP42357 657 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 SLC4A3P48751 1232 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 PPM1FP49593 454 aaPredicted RBP4.99□□□□□ -1.61
BRCA1-220ENST00000492859 COPAP53621 1224 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 CHMP4BP1P59074 171 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 MCL1Q07820 350 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 PUM3Q15397 648 aaKnown RBP4.99□□□□□ -1.61
BRCA1-220ENST00000492859 ARSHQ5FYA8 562 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 RASGRP2Q7LDG7 609 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 DAAM2Q86T65 1068 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 LAPTM4BQ86VI4 370 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 PACS2Q86VP3 889 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 CKAP2LQ8IYA6 745 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 TTC13Q8NBP0 860 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.99□□□□□ -1.61
BRCA1-220ENST00000492859 RWDD1Q9H446 243 aaPredicted RBP4.99□□□□□ -1.61
BRCA1-220ENST00000492859 FAM217BQ9NTX9 383 aaPredicted RBP4.99□□□□□ -1.61
BRCA1-220ENST00000492859 RABL2AQ9UBK7 228 aaPredicted RBP4.99□□□□□ -1.61
BRCA1-220ENST00000492859 EGFL7Q9UHF1 273 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 DDX41Q9UJV9 622 aaKnown RBP4.99□□□□□ -1.61
BRCA1-220ENST00000492859 HPS5Q9UPZ3 1129 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 ITM2BQ9Y287 266 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 ATP8A1Q9Y2Q0 1164 aa4.99□□□□□ -1.61
BRCA1-220ENST00000492859 EIF4G1Q04637 1599 aaKnown RBP4.98□□□□□ -1.61
BRCA1-220ENST00000492859 ESYT3A0FGR9 886 aa4.98□□□□□ -1.61
BRCA1-220ENST00000492859 FAM221BA6H8Z2 402 aa4.98□□□□□ -1.61
BRCA1-220ENST00000492859 USP17L8P0C7I0 530 aa4.98□□□□□ -1.61
BRCA1-220ENST00000492859 XBP1P17861 261 aa4.98□□□□□ -1.61
BRCA1-220ENST00000492859 TNFAIP3P21580 790 aa4.98□□□□□ -1.61
BRCA1-220ENST00000492859 HOXD10P28358 340 aa4.98□□□□□ -1.61
BRCA1-220ENST00000492859 MECOMQ03112 1051 aa4.98□□□□□ -1.61
BRCA1-220ENST00000492859 DMTNQ08495 405 aa4.98□□□□□ -1.61
BRCA1-220ENST00000492859 PTGDRQ13258 359 aa4.98□□□□□ -1.61
BRCA1-220ENST00000492859 PTPN14Q15678 1187 aa4.98□□□□□ -1.61
BRCA1-220ENST00000492859 CDCA2Q69YH5 1023 aaPredicted RBP4.98□□□□□ -1.61
BRCA1-220ENST00000492859 CCBE1Q6UXH8 406 aaPredicted RBP4.98□□□□□ -1.61
BRCA1-220ENST00000492859 MMS22LQ6ZRQ5 1243 aa4.98□□□□□ -1.61
BRCA1-220ENST00000492859 GIMAP8Q8ND71 665 aaPredicted RBP4.98□□□□□ -1.61
BRCA1-220ENST00000492859 NEK9Q8TD19 979 aa4.98□□□□□ -1.61
BRCA1-220ENST00000492859 SH3TC2Q8TF17 1288 aa4.98□□□□□ -1.61
BRCA1-220ENST00000492859 ZNF232Q9UNY5 417 aa4.98□□□□□ -1.61
BRCA1-220ENST00000492859 CEP131Q9UPN4 1083 aa4.98□□□□□ -1.61
BRCA1-220ENST00000492859 RRP15Q9Y3B9 282 aaKnown RBP4.98□□□□□ -1.61
BRCA1-220ENST00000492859 IPPQ9Y573 584 aa4.98□□□□□ -1.61
BRCA1-220ENST00000492859 KIF16BQ96L93 1317 aa4.98□□□□□ -1.61
BRCA1-220ENST00000492859 INMTO95050 263 aa4.97□□□□□ -1.61
BRCA1-220ENST00000492859 IFIT2P09913 472 aaKnown RBP4.97□□□□□ -1.61
BRCA1-220ENST00000492859 ST13P50502 369 aaKnown RBP4.97□□□□□ -1.61
BRCA1-220ENST00000492859 RAB27AP51159 221 aa4.97□□□□□ -1.61
BRCA1-220ENST00000492859 TKFCQ3LXA3 575 aa4.97□□□□□ -1.61
BRCA1-220ENST00000492859 DALRD3Q5D0E6 543 aaKnown RBP4.97□□□□□ -1.61
BRCA1-220ENST00000492859 UNC5DQ6UXZ4 953 aa4.97□□□□□ -1.61
BRCA1-220ENST00000492859 KIAA0825Q8IV33 1275 aa4.97□□□□□ -1.61
BRCA1-220ENST00000492859 GLYCTKQ8IVS8 523 aa4.97□□□□□ -1.61
BRCA1-220ENST00000492859 ARL10Q8N8L6 244 aa4.97□□□□□ -1.61
BRCA1-220ENST00000492859 MNS1Q8NEH6 495 aa4.97□□□□□ -1.61
BRCA1-220ENST00000492859 GABPB2Q8TAK5 448 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-220ENST00000492859 IPCEF1Q8WWN9 437 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-220ENST00000492859 ERCC4Q92889 916 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-220ENST00000492859 BHMTQ93088 406 aa4.97□□□□□ -1.61
BRCA1-220ENST00000492859 SNX21Q969T3 373 aa4.97□□□□□ -1.61
BRCA1-220ENST00000492859 TEKT1Q969V4 418 aa4.97□□□□□ -1.61
BRCA1-220ENST00000492859 SYAP1Q96A49 352 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-220ENST00000492859 OSBPL5Q9H0X9 879 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-220ENST00000492859 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-220ENST00000492859 SNTG2Q9NY99 539 aa4.97□□□□□ -1.61
BRCA1-220ENST00000492859 SNX5Q9Y5X3 404 aa4.97□□□□□ -1.61
BRCA1-220ENST00000492859 EMILIN1Q9Y6C2 1016 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms