RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 MTMR14Q8NCE2 650 aa15.57■□□□□ 0.08
GPNMB-214ENST00000492858 METTL22Q9BUU2 404 aaPredicted RBP15.57■□□□□ 0.08
GPNMB-214ENST00000492858 VEZTQ9HBM0 779 aa15.57■□□□□ 0.08
GPNMB-214ENST00000492858 RBM27Q9P2N5 1060 aaKnown RBP15.57■□□□□ 0.08
GPNMB-214ENST00000492858 LAMA3Q16787 3333 aa15.57■□□□□ 0.08
GPNMB-214ENST00000492858 MYO1BO43795 1136 aa15.56■□□□□ 0.08
GPNMB-214ENST00000492858 USP2O75604 605 aaPredicted RBP15.56■□□□□ 0.08
GPNMB-214ENST00000492858 TAF1CQ15572 869 aaPredicted RBP15.56■□□□□ 0.08
GPNMB-214ENST00000492858 CERS5Q8N5B7 392 aa15.56■□□□□ 0.08
GPNMB-214ENST00000492858 SH3TC2Q8TF17 1288 aa15.56■□□□□ 0.08
GPNMB-214ENST00000492858 OPTNQ96CV9 577 aa15.56■□□□□ 0.08
GPNMB-214ENST00000492858 ELP3Q9H9T3 547 aa15.56■□□□□ 0.08
GPNMB-214ENST00000492858 LAMB1P07942 1786 aa15.56■□□□□ 0.08
GPNMB-214ENST00000492858 F8W031 263 aaPredicted RBP15.55■□□□□ 0.08
GPNMB-214ENST00000492858 IGHMBP2P38935 993 aaKnown RBP15.55■□□□□ 0.08
GPNMB-214ENST00000492858 CFAP100Q494V2 611 aa15.55■□□□□ 0.08
GPNMB-214ENST00000492858 BRI3BPQ8WY22 251 aa15.55■□□□□ 0.08
GPNMB-214ENST00000492858 MS4A4AQ96JQ5 239 aa15.55■□□□□ 0.08
GPNMB-214ENST00000492858 ZFYVE28Q9HCC9 887 aa15.55■□□□□ 0.08
GPNMB-214ENST00000492858 AOX1Q06278 1338 aa15.54■□□□□ 0.08
GPNMB-214ENST00000492858 SPDYE2BA6NHP3 402 aa15.54■□□□□ 0.08
GPNMB-214ENST00000492858 DDX58O95786 925 aaKnown RBP15.54■□□□□ 0.08
GPNMB-214ENST00000492858 SPDYE6P0CI01 402 aa15.54■□□□□ 0.08
GPNMB-214ENST00000492858 KCNJ4P48050 445 aa15.54■□□□□ 0.08
GPNMB-214ENST00000492858 RASA3Q14644 834 aa15.54■□□□□ 0.08
GPNMB-214ENST00000492858 DPF3Q92784 378 aa15.54■□□□□ 0.08
GPNMB-214ENST00000492858 ANKRD2Q9GZV1 360 aa15.54■□□□□ 0.08
GPNMB-214ENST00000492858 CD209Q9NNX6 404 aa15.54■□□□□ 0.08
GPNMB-214ENST00000492858 MBIPQ9NS73 344 aa15.54■□□□□ 0.08
GPNMB-214ENST00000492858 SPEF2Q9C093 1822 aa15.53■□□□□ 0.08
GPNMB-214ENST00000492858 ELL2O00472 640 aaPredicted RBP15.53■□□□□ 0.08
GPNMB-214ENST00000492858 IGKV5-2P06315 115 aa15.53■□□□□ 0.08
GPNMB-214ENST00000492858 CNKSR2Q8WXI2 1034 aa15.53■□□□□ 0.08
GPNMB-214ENST00000492858 PRMT6Q96LA8 375 aaPredicted RBP15.53■□□□□ 0.08
GPNMB-214ENST00000492858 MAP3K2Q9Y2U5 619 aa15.53■□□□□ 0.08
GPNMB-214ENST00000492858 CCL15-CCL14A0A0B4J2E2 113 aa15.52■□□□□ 0.08
GPNMB-214ENST00000492858 CCL15Q16663 113 aa15.52■□□□□ 0.08
GPNMB-214ENST00000492858 MPHOSPH8Q99549 860 aa15.52■□□□□ 0.08
GPNMB-214ENST00000492858 ARHGAP39Q9C0H5 1083 aa15.52■□□□□ 0.08
GPNMB-214ENST00000492858 GTF2A2P52657 109 aa15.51■□□□□ 0.07
GPNMB-214ENST00000492858 RBM5P52756 815 aaKnown RBP eCLIP15.51■□□□□ 0.07
GPNMB-214ENST00000492858 FAM43AQ8N2R8 423 aa15.51■□□□□ 0.07
GPNMB-214ENST00000492858 RUNDC1Q96C34 613 aa15.51■□□□□ 0.07
GPNMB-214ENST00000492858 SHISA4Q96DD7 197 aa15.51■□□□□ 0.07
GPNMB-214ENST00000492858 SNAP23O00161 211 aa15.5■□□□□ 0.07
GPNMB-214ENST00000492858 ITGA6P23229 1130 aa15.5■□□□□ 0.07
GPNMB-214ENST00000492858 CHRNDQ07001 517 aa15.5■□□□□ 0.07
GPNMB-214ENST00000492858 KIF22Q14807 665 aa15.5■□□□□ 0.07
GPNMB-214ENST00000492858 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.5■□□□□ 0.07
GPNMB-214ENST00000492858 UBE3BQ7Z3V4 1068 aa15.5■□□□□ 0.07
GPNMB-214ENST00000492858 PI4KAP2A4QPH2 592 aa15.49■□□□□ 0.07
GPNMB-214ENST00000492858 WDHD1O75717 1129 aaPredicted RBP15.49■□□□□ 0.07
GPNMB-214ENST00000492858 LACTBP83111 547 aaPredicted RBP15.49■□□□□ 0.07
GPNMB-214ENST00000492858 TNFAIP1Q13829 316 aa15.49■□□□□ 0.07
GPNMB-214ENST00000492858 VGLL4Q14135 290 aa15.49■□□□□ 0.07
GPNMB-214ENST00000492858 MTFR1Q15390 333 aa15.49■□□□□ 0.07
GPNMB-214ENST00000492858 CWF19L2Q2TBE0 894 aaKnown RBP15.49■□□□□ 0.07
GPNMB-214ENST00000492858 CDAN1Q8IWY9 1227 aa15.49■□□□□ 0.07
GPNMB-214ENST00000492858 PI4KAP1Q8N8J0 262 aa15.49■□□□□ 0.07
GPNMB-214ENST00000492858 JAG2Q9Y219 1238 aa15.49■□□□□ 0.07
GPNMB-214ENST00000492858 CUL9Q8IWT3 2517 aa15.48■□□□□ 0.07
GPNMB-214ENST00000492858 TLR2O60603 784 aa15.48■□□□□ 0.07
GPNMB-214ENST00000492858 ECM2O94769 699 aaPredicted RBP15.48■□□□□ 0.07
GPNMB-214ENST00000492858 ZNF853P0CG23 659 aa15.48■□□□□ 0.07
GPNMB-214ENST00000492858 NEXNQ0ZGT2 675 aa15.48■□□□□ 0.07
GPNMB-214ENST00000492858 KSR2Q6VAB6 950 aa15.48■□□□□ 0.07
GPNMB-214ENST00000492858 PRO3102Q9H379 93 aa15.48■□□□□ 0.07
GPNMB-214ENST00000492858 ECM29Q5VYK3 1845 aa15.47■□□□□ 0.07
GPNMB-214ENST00000492858 OTOFQ9HC10 1997 aa15.47■□□□□ 0.07
GPNMB-214ENST00000492858 IRS2Q9Y4H2 1338 aa15.47■□□□□ 0.07
GPNMB-214ENST00000492858 NEURL1BA8MQ27 555 aa15.47■□□□□ 0.07
GPNMB-214ENST00000492858 TAF5LO75529 589 aa15.47■□□□□ 0.07
GPNMB-214ENST00000492858 FKBP1AP62942 108 aaKnown RBP15.47■□□□□ 0.07
GPNMB-214ENST00000492858 MAP3K9P80192 1104 aa15.47■□□□□ 0.07
GPNMB-214ENST00000492858 CCDC30Q5VVM6 783 aa15.47■□□□□ 0.07
GPNMB-214ENST00000492858 ZNF804AQ7Z570 1209 aa15.47■□□□□ 0.07
GPNMB-214ENST00000492858 C8orf58Q8NAV2 365 aa15.47■□□□□ 0.07
GPNMB-214ENST00000492858 HTATIP2Q9BUP3 242 aa15.47■□□□□ 0.07
GPNMB-214ENST00000492858 ZNF70Q9UC06 446 aaPredicted RBP15.47■□□□□ 0.07
GPNMB-214ENST00000492858 CSADQ9Y600 493 aa15.47■□□□□ 0.07
GPNMB-214ENST00000492858 H7C1W4 665 aa15.46■□□□□ 0.07
GPNMB-214ENST00000492858 GNRH1P01148 92 aa15.46■□□□□ 0.07
GPNMB-214ENST00000492858 IL1R1P14778 569 aa15.46■□□□□ 0.07
GPNMB-214ENST00000492858 PRMT2P55345 433 aa15.46■□□□□ 0.07
GPNMB-214ENST00000492858 SPDYE2Q495Y8 402 aa15.46■□□□□ 0.07
GPNMB-214ENST00000492858 C15orf52Q6ZUT6 534 aaKnown RBP15.46■□□□□ 0.07
GPNMB-214ENST00000492858 HELBQ8NG08 1087 aaPredicted RBP15.46■□□□□ 0.07
GPNMB-214ENST00000492858 TEPSINQ96N21 525 aa15.46■□□□□ 0.07
GPNMB-214ENST00000492858 IFT57Q9NWB7 429 aa15.46■□□□□ 0.07
GPNMB-214ENST00000492858 NR2E3Q9Y5X4 410 aa15.46■□□□□ 0.07
GPNMB-214ENST00000492858 UNC80Q8N2C7 3258 aa15.46■□□□□ 0.07
GPNMB-214ENST00000492858 MYH3P11055 1940 aa15.46■□□□□ 0.07
GPNMB-214ENST00000492858 ZSWIM8A7E2V4 1837 aa15.45■□□□□ 0.06
GPNMB-214ENST00000492858 BTBD19C9JJ37 291 aa15.45■□□□□ 0.06
GPNMB-214ENST00000492858 WDR43Q15061 677 aaKnown RBP eCLIP15.45■□□□□ 0.06
GPNMB-214ENST00000492858 RALBP1Q15311 655 aa15.45■□□□□ 0.06
GPNMB-214ENST00000492858 UBE2Q1Q7Z7E8 422 aa15.45■□□□□ 0.06
GPNMB-214ENST00000492858 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.45■□□□□ 0.06
GPNMB-214ENST00000492858 NKX2-3Q8TAU0 364 aa15.45■□□□□ 0.06
GPNMB-214ENST00000492858 PLA2G12BQ9BX93 195 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms