RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 LCE2CQ5TA81 110 aa6.4□□□□□ -1.38
CLK1-213ENST00000492793 HS2ST1Q7LGA3 356 aa6.4□□□□□ -1.38
CLK1-213ENST00000492793 C3orf58Q8NDZ4 430 aa6.4□□□□□ -1.38
CLK1-213ENST00000492793 MDFIQ99750 246 aa6.4□□□□□ -1.38
CLK1-213ENST00000492793 CEP44Q9C0F1 390 aa6.4□□□□□ -1.38
CLK1-213ENST00000492793 CLEC4MQ9H2X3 399 aaPredicted RBP6.4□□□□□ -1.38
CLK1-213ENST00000492793 ZNF576Q9H609 170 aa6.4□□□□□ -1.38
CLK1-213ENST00000492793 GGT7Q9UJ14 662 aa6.4□□□□□ -1.38
CLK1-213ENST00000492793 USP31Q70CQ4 1352 aa6.4□□□□□ -1.39
CLK1-213ENST00000492793 LINC01387J3KSC0 135 aa6.39□□□□□ -1.39
CLK1-213ENST00000492793 EPHA1P21709 976 aa6.39□□□□□ -1.39
CLK1-213ENST00000492793 ITPKAP23677 461 aa6.39□□□□□ -1.39
CLK1-213ENST00000492793 ARL4DP49703 201 aa6.39□□□□□ -1.39
CLK1-213ENST00000492793 AFF1P51825 1210 aaKnown RBP6.39□□□□□ -1.39
CLK1-213ENST00000492793 HDLBPQ00341 1268 aaKnown RBP6.39□□□□□ -1.39
CLK1-213ENST00000492793 FANCCQ00597 558 aa6.39□□□□□ -1.39
CLK1-213ENST00000492793 IKBKEQ14164 716 aa6.39□□□□□ -1.39
CLK1-213ENST00000492793 ADAMTSL4Q6UY14 1074 aa6.39□□□□□ -1.39
CLK1-213ENST00000492793 TTC9Q92623 222 aa6.39□□□□□ -1.39
CLK1-213ENST00000492793 METTL5Q9NRN9 209 aaKnown RBP6.39□□□□□ -1.39
CLK1-213ENST00000492793 PPM1HQ9ULR3 514 aa6.39□□□□□ -1.39
CLK1-213ENST00000492793 PPME1Q9Y570 386 aa6.39□□□□□ -1.39
CLK1-213ENST00000492793 F6X3S4 739 aa6.38□□□□□ -1.39
CLK1-213ENST00000492793 LMNB1P20700 586 aa6.38□□□□□ -1.39
CLK1-213ENST00000492793 ST13P50502 369 aaKnown RBP6.38□□□□□ -1.39
CLK1-213ENST00000492793 PTPN12Q05209 780 aaKnown RBP6.38□□□□□ -1.39
CLK1-213ENST00000492793 PPP2R3AQ06190 1150 aa6.38□□□□□ -1.39
CLK1-213ENST00000492793 TRAPPC3LQ5T215 181 aa6.38□□□□□ -1.39
CLK1-213ENST00000492793 LDLRAD1Q5T700 205 aa6.38□□□□□ -1.39
CLK1-213ENST00000492793 C20orf204Q6ZNR8 217 aa6.38□□□□□ -1.39
CLK1-213ENST00000492793 NT5DC4Q86YG4 428 aa6.38□□□□□ -1.39
CLK1-213ENST00000492793 DMRTC2Q8IXT2 367 aaPredicted RBP6.38□□□□□ -1.39
CLK1-213ENST00000492793 CACTIN-AS1Q8N1I8 211 aa6.38□□□□□ -1.39
CLK1-213ENST00000492793 ADAM19Q9H013 955 aa6.38□□□□□ -1.39
CLK1-213ENST00000492793 SEC31BQ9NQW1 1179 aa6.38□□□□□ -1.39
CLK1-213ENST00000492793 SOX13Q9UN79 622 aa6.38□□□□□ -1.39
CLK1-213ENST00000492793 H3BRJ5 948 aa6.37□□□□□ -1.39
CLK1-213ENST00000492793 GSTM4Q03013 218 aa6.37□□□□□ -1.39
CLK1-213ENST00000492793 ZNF385CQ66K41 422 aaPredicted RBP6.37□□□□□ -1.39
CLK1-213ENST00000492793 MSL1Q68DK7 614 aa6.37□□□□□ -1.39
CLK1-213ENST00000492793 VN1R5Q7Z5H4 357 aa6.37□□□□□ -1.39
CLK1-213ENST00000492793 RELL1Q8IUW5 271 aa6.37□□□□□ -1.39
CLK1-213ENST00000492793 DDX54Q8TDD1 881 aaKnown RBP6.37□□□□□ -1.39
CLK1-213ENST00000492793 TRIM56Q9BRZ2 755 aaKnown RBP6.37□□□□□ -1.39
CLK1-213ENST00000492793 CBX8Q9HC52 389 aa6.37□□□□□ -1.39
CLK1-213ENST00000492793 TMEM39AQ9NV64 488 aa6.37□□□□□ -1.39
CLK1-213ENST00000492793 MINDY4BA8MYZ0 360 aa6.36□□□□□ -1.39
CLK1-213ENST00000492793 CELA3AP09093 270 aa6.36□□□□□ -1.39
CLK1-213ENST00000492793 ESRRAP11474 423 aaPredicted RBP6.36□□□□□ -1.39
CLK1-213ENST00000492793 GBP2P32456 591 aaPredicted RBP6.36□□□□□ -1.39
CLK1-213ENST00000492793 FAAP100Q0VG06 881 aa6.36□□□□□ -1.39
CLK1-213ENST00000492793 GRIK5Q16478 980 aa6.36□□□□□ -1.39
CLK1-213ENST00000492793 ZNF423Q2M1K9 1284 aa6.36□□□□□ -1.39
CLK1-213ENST00000492793 RPS26P11Q5JNZ5 115 aaPredicted RBP6.36□□□□□ -1.39
CLK1-213ENST00000492793 SV2BQ7L1I2 683 aa6.36□□□□□ -1.39
CLK1-213ENST00000492793 USP48Q86UV5 1035 aa6.36□□□□□ -1.39
CLK1-213ENST00000492793 CARD10Q9BWT7 1032 aa6.36□□□□□ -1.39
CLK1-213ENST00000492793 CCSER2Q9H7U1 834 aa6.36□□□□□ -1.39
CLK1-213ENST00000492793 LRRC4BQ9NT99 713 aa6.36□□□□□ -1.39
CLK1-213ENST00000492793 SAMM50Q9Y512 469 aa6.36□□□□□ -1.39
CLK1-213ENST00000492793 PCDHGB7Q9Y5F8 929 aa6.36□□□□□ -1.39
CLK1-213ENST00000492793 SOX1O00570 391 aaPredicted RBP6.35□□□□□ -1.39
CLK1-213ENST00000492793 ZNF394Q53GI3 561 aa6.35□□□□□ -1.39
CLK1-213ENST00000492793 NECAB3Q96P71 396 aaPredicted RBP6.35□□□□□ -1.39
CLK1-213ENST00000492793 NOC4LQ9BVI4 516 aaKnown RBP6.35□□□□□ -1.39
CLK1-213ENST00000492793 ENC1O14682 589 aa6.34□□□□□ -1.39
CLK1-213ENST00000492793 FSCN2O14926 492 aa6.34□□□□□ -1.39
CLK1-213ENST00000492793 BAG6P46379 1132 aa6.34□□□□□ -1.39
CLK1-213ENST00000492793 C19orf57Q0VDD7 668 aa6.34□□□□□ -1.39
CLK1-213ENST00000492793 PWP1Q13610 501 aa6.34□□□□□ -1.39
CLK1-213ENST00000492793 TTBK2Q6IQ55 1244 aa6.34□□□□□ -1.39
CLK1-213ENST00000492793 COPRSQ9NQ92 184 aa6.34□□□□□ -1.39
CLK1-213ENST00000492793 IGSF5Q9NSI5 407 aa6.34□□□□□ -1.39
CLK1-213ENST00000492793 KBTBD4Q9NVX7 518 aa6.34□□□□□ -1.39
CLK1-213ENST00000492793 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.34□□□□□ -1.39
CLK1-213ENST00000492793 PAGE1O75459 146 aa6.33□□□□□ -1.4
CLK1-213ENST00000492793 B3GALT4O96024 378 aa6.33□□□□□ -1.4
CLK1-213ENST00000492793 RLBP1P12271 317 aa6.33□□□□□ -1.4
CLK1-213ENST00000492793 LIG3P49916 1009 aa6.33□□□□□ -1.4
CLK1-213ENST00000492793 PIP4K2BP78356 416 aa6.33□□□□□ -1.4
CLK1-213ENST00000492793 PCNX4Q63HM2 1172 aa6.33□□□□□ -1.4
CLK1-213ENST00000492793 HGSNATQ68CP4 663 aa6.33□□□□□ -1.4
CLK1-213ENST00000492793 METTL16Q86W50 562 aaKnown RBP6.33□□□□□ -1.4
CLK1-213ENST00000492793 SULF2Q8IWU5 870 aa6.33□□□□□ -1.4
CLK1-213ENST00000492793 USP26Q9BXU7 913 aa6.33□□□□□ -1.4
CLK1-213ENST00000492793 ZC3H12CQ9C0D7 883 aaKnown RBP6.33□□□□□ -1.4
CLK1-213ENST00000492793 TLR6Q9Y2C9 796 aa6.33□□□□□ -1.4
CLK1-213ENST00000492793 NID1P14543 1247 aa6.32□□□□□ -1.4
CLK1-213ENST00000492793 NME2P22392 152 aa6.32□□□□□ -1.4
CLK1-213ENST00000492793 DGKGP49619 791 aa6.32□□□□□ -1.4
CLK1-213ENST00000492793 NLRP12P59046 1061 aa6.32□□□□□ -1.4
CLK1-213ENST00000492793 RAC1P63000 192 aa6.32□□□□□ -1.4
CLK1-213ENST00000492793 SNRPNP63162 240 aaKnown RBP6.32□□□□□ -1.4
CLK1-213ENST00000492793 PODNQ7Z5L7 613 aa6.32□□□□□ -1.4
CLK1-213ENST00000492793 ZNF654Q8IZM8 581 aa6.32□□□□□ -1.4
CLK1-213ENST00000492793 ZSCAN1Q8NBB4 408 aa6.32□□□□□ -1.4
CLK1-213ENST00000492793 KCNB2Q92953 911 aa6.32□□□□□ -1.4
CLK1-213ENST00000492793 KLHDC7BQ96G42 594 aa6.32□□□□□ -1.4
CLK1-213ENST00000492793 CORO1BQ9BR76 489 aa6.32□□□□□ -1.4
CLK1-213ENST00000492793 TGIF2Q9GZN2 237 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms