RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 FAM177BA6PVY3 158 aa18.86■□□□□ 0.61
SEMA4D-220ENST00000492386 GOLGA6L19H0YKK7 550 aa18.86■□□□□ 0.61
SEMA4D-220ENST00000492386 CHAF1AQ13111 956 aaPredicted RBP18.86■□□□□ 0.61
SEMA4D-220ENST00000492386 IMMTQ16891 758 aaKnown RBP18.86■□□□□ 0.61
SEMA4D-220ENST00000492386 WASHC4Q2M389 1173 aa18.86■□□□□ 0.61
SEMA4D-220ENST00000492386 MB21D2Q8IYB1 491 aaPredicted RBP18.86■□□□□ 0.61
SEMA4D-220ENST00000492386 CACTINQ8WUQ7 758 aaKnown RBP18.86■□□□□ 0.61
SEMA4D-220ENST00000492386 RTEL1Q9NZ71 1219 aa18.86■□□□□ 0.61
SEMA4D-220ENST00000492386 PCDHA7Q9UN72 937 aa18.86■□□□□ 0.61
SEMA4D-220ENST00000492386 BRINP3Q76B58 766 aa18.85■□□□□ 0.61
SEMA4D-220ENST00000492386 PLA2G12BQ9BX93 195 aa18.85■□□□□ 0.61
SEMA4D-220ENST00000492386 HPS5Q9UPZ3 1129 aa18.85■□□□□ 0.61
SEMA4D-220ENST00000492386 ZAP70P43403 619 aa18.85■□□□□ 0.61
SEMA4D-220ENST00000492386 DHX40Q8IX18 779 aaKnown RBP18.85■□□□□ 0.61
SEMA4D-220ENST00000492386 APPBP2Q92624 585 aa18.85■□□□□ 0.61
SEMA4D-220ENST00000492386 MRFAP1L1Q96HT8 127 aa18.85■□□□□ 0.61
SEMA4D-220ENST00000492386 CCDC85AQ96PX6 553 aaPredicted RBP18.85■□□□□ 0.61
SEMA4D-220ENST00000492386 PUS7LQ9H0K6 701 aaKnown RBP18.85■□□□□ 0.61
SEMA4D-220ENST00000492386 BCL2L12Q9HB09 334 aa18.85■□□□□ 0.61
SEMA4D-220ENST00000492386 ABCC12Q96J65 1359 aa18.85■□□□□ 0.61
SEMA4D-220ENST00000492386 AKAP11Q9UKA4 1901 aa18.85■□□□□ 0.61
SEMA4D-220ENST00000492386 RIC1Q4ADV7 1423 aa18.84■□□□□ 0.61
SEMA4D-220ENST00000492386 A0A087WWV3 80 aa18.84■□□□□ 0.61
SEMA4D-220ENST00000492386 PRC1O43663 620 aa18.84■□□□□ 0.61
SEMA4D-220ENST00000492386 PCCAP05165 728 aaPredicted RBP18.84■□□□□ 0.61
SEMA4D-220ENST00000492386 CSF1RP07333 972 aa18.84■□□□□ 0.61
SEMA4D-220ENST00000492386 ANTXR2P58335 489 aa18.84■□□□□ 0.61
SEMA4D-220ENST00000492386 FMR1NBQ8N0W7 255 aaPredicted RBP18.84■□□□□ 0.61
SEMA4D-220ENST00000492386 FAM89AQ96GI7 184 aa18.84■□□□□ 0.61
SEMA4D-220ENST00000492386 CARD10Q9BWT7 1032 aa18.84■□□□□ 0.61
SEMA4D-220ENST00000492386 HSP90AB3PQ58FF7 597 aa18.84■□□□□ 0.61
SEMA4D-220ENST00000492386 OTUD7BQ6GQQ9 843 aa18.84■□□□□ 0.61
SEMA4D-220ENST00000492386 PI16Q6UXB8 463 aa18.84■□□□□ 0.61
SEMA4D-220ENST00000492386 ANO10Q9NW15 660 aa18.84■□□□□ 0.61
SEMA4D-220ENST00000492386 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.83■□□□□ 0.61
SEMA4D-220ENST00000492386 ADALQ6DHV7 355 aa18.83■□□□□ 0.61
SEMA4D-220ENST00000492386 MRPS27Q92552 414 aaKnown RBP18.83■□□□□ 0.61
SEMA4D-220ENST00000492386 C4AP0C0L4 1744 aa18.83■□□□□ 0.61
SEMA4D-220ENST00000492386 C4BP0C0L5 1744 aa18.83■□□□□ 0.61
SEMA4D-220ENST00000492386 KLF18A0A0U1RQI7 1052 aa18.83■□□□□ 0.6
SEMA4D-220ENST00000492386 A0A1W2PQ27 194 aa18.83■□□□□ 0.6
SEMA4D-220ENST00000492386 A0A1W2PQ64 194 aa18.83■□□□□ 0.6
SEMA4D-220ENST00000492386 A0A1W2PQD8 194 aa18.83■□□□□ 0.6
SEMA4D-220ENST00000492386 LINC00301Q8NCQ3 95 aa18.83■□□□□ 0.6
SEMA4D-220ENST00000492386 ZNF330Q9Y3S2 320 aaPredicted RBP18.83■□□□□ 0.6
SEMA4D-220ENST00000492386 ABCA3Q99758 1704 aa18.82■□□□□ 0.6
SEMA4D-220ENST00000492386 GOLGA8BA8MQT2 603 aa18.82■□□□□ 0.6
SEMA4D-220ENST00000492386 ZBTB38Q8NAP3 1195 aaPredicted RBP18.82■□□□□ 0.6
SEMA4D-220ENST00000492386 FBXO18Q8NFZ0 1043 aa18.82■□□□□ 0.6
SEMA4D-220ENST00000492386 C8orf76Q96K31 380 aa18.82■□□□□ 0.6
SEMA4D-220ENST00000492386 ARID3AQ99856 593 aa18.82■□□□□ 0.6
SEMA4D-220ENST00000492386 CCDC94Q9BW85 323 aaPredicted RBP18.82■□□□□ 0.6
SEMA4D-220ENST00000492386 CTIFO43310 598 aaKnown RBP18.82■□□□□ 0.6
SEMA4D-220ENST00000492386 IFIT5Q13325 482 aaKnown RBP18.82■□□□□ 0.6
SEMA4D-220ENST00000492386 NCOA7Q8NI08 942 aa18.82■□□□□ 0.6
SEMA4D-220ENST00000492386 ERCC4Q92889 916 aaPredicted RBP18.82■□□□□ 0.6
SEMA4D-220ENST00000492386 ZMYND15Q9H091 742 aa18.82■□□□□ 0.6
SEMA4D-220ENST00000492386 CLIC4Q9Y696 253 aa18.82■□□□□ 0.6
SEMA4D-220ENST00000492386 GPAA1O43292 621 aa18.81■□□□□ 0.6
SEMA4D-220ENST00000492386 DHX16O60231 1041 aaKnown RBP18.81■□□□□ 0.6
SEMA4D-220ENST00000492386 TAF7LQ5H9L4 462 aa18.81■□□□□ 0.6
SEMA4D-220ENST00000492386 LRRC8AQ8IWT6 810 aa18.81■□□□□ 0.6
SEMA4D-220ENST00000492386 C16orf45Q96MC5 204 aaPredicted RBP18.81■□□□□ 0.6
SEMA4D-220ENST00000492386 POLR3EQ9NVU0 708 aa18.81■□□□□ 0.6
SEMA4D-220ENST00000492386 ORC3Q9UBD5 711 aaPredicted RBP18.81■□□□□ 0.6
SEMA4D-220ENST00000492386 WDR19Q8NEZ3 1342 aa18.81■□□□□ 0.6
SEMA4D-220ENST00000492386 A0A1B0GVL5 298 aa18.81■□□□□ 0.6
SEMA4D-220ENST00000492386 BECN2A8MW95 431 aa18.81■□□□□ 0.6
SEMA4D-220ENST00000492386 NDUFA8P51970 172 aa18.81■□□□□ 0.6
SEMA4D-220ENST00000492386 RIPOR2Q9Y4F9 1068 aa18.81■□□□□ 0.6
SEMA4D-220ENST00000492386 POLR3DP05423 398 aaPredicted RBP18.8■□□□□ 0.6
SEMA4D-220ENST00000492386 ATP2B3Q16720 1220 aa18.8■□□□□ 0.6
SEMA4D-220ENST00000492386 KIF6Q6ZMV9 814 aa18.8■□□□□ 0.6
SEMA4D-220ENST00000492386 DNAJC10Q8IXB1 793 aa18.8■□□□□ 0.6
SEMA4D-220ENST00000492386 CEP57L1Q8IYX8 460 aa18.8■□□□□ 0.6
SEMA4D-220ENST00000492386 SYNE4Q8N205 404 aa18.8■□□□□ 0.6
SEMA4D-220ENST00000492386 NBPF3Q9H094 633 aa18.8■□□□□ 0.6
SEMA4D-220ENST00000492386 TMOD3Q9NYL9 352 aa18.8■□□□□ 0.6
SEMA4D-220ENST00000492386 MYO5AQ9Y4I1 1855 aaKnown RBP18.8■□□□□ 0.6
SEMA4D-220ENST00000492386 NEDD4P46934 1319 aa18.8■□□□□ 0.6
SEMA4D-220ENST00000492386 YEATS4O95619 227 aa18.79■□□□□ 0.6
SEMA4D-220ENST00000492386 MCAMP43121 646 aa18.79■□□□□ 0.6
SEMA4D-220ENST00000492386 ARID5BQ14865 1188 aa18.79■□□□□ 0.6
SEMA4D-220ENST00000492386 STK38Q15208 465 aa18.79■□□□□ 0.6
SEMA4D-220ENST00000492386 RAB11FIP4Q86YS3 637 aa18.79■□□□□ 0.6
SEMA4D-220ENST00000492386 KCNG4Q8TDN1 519 aa18.79■□□□□ 0.6
SEMA4D-220ENST00000492386 GJB4Q9NTQ9 266 aa18.79■□□□□ 0.6
SEMA4D-220ENST00000492386 ZNF213O14771 459 aa18.79■□□□□ 0.6
SEMA4D-220ENST00000492386 MYSM1Q5VVJ2 828 aa18.79■□□□□ 0.6
SEMA4D-220ENST00000492386 BRAPQ7Z569 592 aa18.79■□□□□ 0.6
SEMA4D-220ENST00000492386 RALYLQ86SE5 291 aaKnown RBP18.79■□□□□ 0.6
SEMA4D-220ENST00000492386 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.79■□□□□ 0.6
SEMA4D-220ENST00000492386 SOS2Q07890 1332 aaPredicted RBP18.79■□□□□ 0.6
SEMA4D-220ENST00000492386 MYH3P11055 1940 aa18.78■□□□□ 0.6
SEMA4D-220ENST00000492386 KIF28PB7ZC32 967 aa18.78■□□□□ 0.6
SEMA4D-220ENST00000492386 AOPEPQ8N6M6 819 aa18.78■□□□□ 0.6
SEMA4D-220ENST00000492386 ANKRD7Q92527 254 aa18.78■□□□□ 0.6
SEMA4D-220ENST00000492386 SDF4Q9BRK5 362 aa18.78■□□□□ 0.6
SEMA4D-220ENST00000492386 ASAP1Q9ULH1 1129 aa18.78■□□□□ 0.6
SEMA4D-220ENST00000492386 CDHR2Q9BYE9 1310 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms