RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 FMNL1O95466 1100 aaPredicted RBP4.53□□□□□ -1.68
ATPAF1-206ENST00000492233 GNAI2P04899 355 aa4.53□□□□□ -1.68
ATPAF1-206ENST00000492233 KRT18P05783 430 aaKnown RBP4.53□□□□□ -1.68
ATPAF1-206ENST00000492233 GNALP38405 381 aa4.53□□□□□ -1.68
ATPAF1-206ENST00000492233 PSMD2Q13200 908 aa4.53□□□□□ -1.68
ATPAF1-206ENST00000492233 PPP2R5AQ15172 486 aa4.53□□□□□ -1.68
ATPAF1-206ENST00000492233 SWI5Q1ZZU3 235 aa4.53□□□□□ -1.68
ATPAF1-206ENST00000492233 CCDC30Q5VVM6 783 aa4.53□□□□□ -1.68
ATPAF1-206ENST00000492233 LHX8Q68G74 356 aa4.53□□□□□ -1.68
ATPAF1-206ENST00000492233 CCDC174Q6PII3 467 aa4.53□□□□□ -1.68
ATPAF1-206ENST00000492233 G2E3Q7L622 706 aa4.53□□□□□ -1.68
ATPAF1-206ENST00000492233 IL17REQ8NFR9 667 aa4.53□□□□□ -1.68
ATPAF1-206ENST00000492233 IP6K1Q92551 441 aa4.53□□□□□ -1.68
ATPAF1-206ENST00000492233 MS4A3Q96HJ5 214 aa4.53□□□□□ -1.68
ATPAF1-206ENST00000492233 DUSP9Q99956 384 aaKnown RBP4.53□□□□□ -1.68
ATPAF1-206ENST00000492233 STK31Q9BXU1 1019 aa4.53□□□□□ -1.68
ATPAF1-206ENST00000492233 HOMER2Q9NSB8 354 aa4.53□□□□□ -1.68
ATPAF1-206ENST00000492233 ANAPC4Q9UJX5 808 aa4.53□□□□□ -1.68
ATPAF1-206ENST00000492233 PXDNLA1KZ92 1463 aa4.53□□□□□ -1.68
ATPAF1-206ENST00000492233 ADGRL3Q9HAR2 1447 aa4.53□□□□□ -1.68
ATPAF1-206ENST00000492233 CEMIPQ8WUJ3 1361 aa4.53□□□□□ -1.69
ATPAF1-206ENST00000492233 NFAT5O94916 1531 aa4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 ERBB3P21860 1342 aa4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 FSD2A1L4K1 749 aa4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 DDX11L8A8MPP1 907 aa4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 FGAP02671 866 aa4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 LDHBP07195 334 aaKnown RBP4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 HSP90AB1P08238 724 aaKnown RBP4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 GNAI3P08754 354 aa4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 HOXB7P09629 217 aa4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 POLD1P28340 1107 aa4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 ATP8B2P98198 1209 aa4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 FKBP4Q02790 459 aaKnown RBP eCLIP4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 DPYDQ12882 1025 aa4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 RAB3GAP1Q15042 981 aa4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 RABEP1Q15276 862 aa4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 TAF7Q15545 349 aaPredicted RBP4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 MAPRE1Q15691 268 aaKnown RBP4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 CLEC17AQ6ZS10 378 aa4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 TMC4Q7Z404 712 aa4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 ANKLE2Q86XL3 938 aa4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 C16orf71Q8IYS4 520 aaPredicted RBP4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 ZNF654Q8IZM8 581 aa4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 SAMD3Q8N6K7 520 aa4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 ABTB2Q8N961 1025 aa4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 KCNH5Q8NCM2 988 aa4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 EPS8L1Q8TE68 723 aa4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 PXYLP1Q8TE99 480 aa4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 LRRN4Q8WUT4 740 aa4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 RELTQ969Z4 430 aa4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 SRPK1Q96SB4 655 aaKnown RBP4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 USP26Q9BXU7 913 aa4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 TMX1Q9H3N1 280 aa4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 CASS4Q9NQ75 786 aa4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 AVENQ9NQS1 362 aaPredicted RBP4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 RNF19AQ9NV58 838 aa4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 MIS18AQ9NYP9 233 aa4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 THRAP3Q9Y2W1 955 aaKnown RBP4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 NCAPD2Q15021 1401 aa4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 FER1L4A9Z1Z3 1794 aa4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 MED1Q15648 1581 aaPredicted RBP4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 MARF1Q9Y4F3 1742 aaKnown RBP4.52□□□□□ -1.69
ATPAF1-206ENST00000492233 LMTK3Q96Q04 1460 aa4.51□□□□□ -1.69
ATPAF1-206ENST00000492233 F6X3S4 739 aa4.51□□□□□ -1.69
ATPAF1-206ENST00000492233 TNFRSF10BO14763 440 aa4.51□□□□□ -1.69
ATPAF1-206ENST00000492233 DHX16O60231 1041 aaKnown RBP4.51□□□□□ -1.69
ATPAF1-206ENST00000492233 BPNT1O95861 308 aa4.51□□□□□ -1.69
ATPAF1-206ENST00000492233 SDSP20132 328 aa4.51□□□□□ -1.69
ATPAF1-206ENST00000492233 NOS2P35228 1153 aa4.51□□□□□ -1.69
ATPAF1-206ENST00000492233 GJA5P36382 358 aa4.51□□□□□ -1.69
ATPAF1-206ENST00000492233 MAPK8P45983 427 aa4.51□□□□□ -1.69
ATPAF1-206ENST00000492233 CLCN6P51797 869 aa4.51□□□□□ -1.69
ATPAF1-206ENST00000492233 ARHGAP4P98171 946 aa4.51□□□□□ -1.69
ATPAF1-206ENST00000492233 CBLBQ13191 982 aa4.51□□□□□ -1.69
ATPAF1-206ENST00000492233 VPS72Q15906 364 aa4.51□□□□□ -1.69
ATPAF1-206ENST00000492233 ECM1Q16610 540 aa4.51□□□□□ -1.69
ATPAF1-206ENST00000492233 PRPF38BQ5VTL8 546 aaKnown RBP4.51□□□□□ -1.69
ATPAF1-206ENST00000492233 SLC4A10Q6U841 1118 aa4.51□□□□□ -1.69
ATPAF1-206ENST00000492233 TAS1R3Q7RTX0 852 aa4.51□□□□□ -1.69
ATPAF1-206ENST00000492233 RAVER1Q8IY67 606 aaKnown RBP4.51□□□□□ -1.69
ATPAF1-206ENST00000492233 NFATC2IPQ8NCF5 419 aa4.51□□□□□ -1.69
ATPAF1-206ENST00000492233 OTUD7AQ8TE49 926 aaPredicted RBP4.51□□□□□ -1.69
ATPAF1-206ENST00000492233 GTF3C2Q8WUA4 911 aaPredicted RBP4.51□□□□□ -1.69
ATPAF1-206ENST00000492233 MKL1Q969V6 931 aa4.51□□□□□ -1.69
ATPAF1-206ENST00000492233 PRIMPOLQ96LW4 560 aa4.51□□□□□ -1.69
ATPAF1-206ENST00000492233 CDC5LQ99459 802 aaKnown RBP4.51□□□□□ -1.69
ATPAF1-206ENST00000492233 ZBTB3Q9H5J0 574 aa4.51□□□□□ -1.69
ATPAF1-206ENST00000492233 STAP2Q9UGK3 403 aa4.51□□□□□ -1.69
ATPAF1-206ENST00000492233 ISY1Q9ULR0 285 aaKnown RBP4.51□□□□□ -1.69
ATPAF1-206ENST00000492233 OVOS2A0A0G2JMS6 1433 aa4.51□□□□□ -1.69
ATPAF1-206ENST00000492233 MST1RQ04912 1400 aa4.51□□□□□ -1.69
ATPAF1-206ENST00000492233 IBTKQ9P2D0 1353 aaPredicted RBP4.51□□□□□ -1.69
ATPAF1-206ENST00000492233 SLIT3O75094 1523 aa4.51□□□□□ -1.69
ATPAF1-206ENST00000492233 PHRF1Q9P1Y6 1649 aaKnown RBP4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 AOX1Q06278 1338 aa4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 NPHP4O75161 1426 aaPredicted RBP4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 TTC36A6NLP5 189 aa4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 ATP5J2-PTCD1G3V325 749 aa4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 ERC2O15083 957 aa4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 MAP3K7O43318 606 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms