RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 TSR2Q969E8 191 aaKnown RBP18.49■□□□□ 0.55
SSR4-212ENST00000491833 ERO1AQ96HE7 468 aa18.49■□□□□ 0.55
SSR4-212ENST00000491833 CLMNQ96JQ2 1002 aa18.49■□□□□ 0.55
SSR4-212ENST00000491833 PRKRIP1Q9H875 184 aaPredicted RBP18.49■□□□□ 0.55
SSR4-212ENST00000491833 CERS5Q8N5B7 392 aa18.48■□□□□ 0.55
SSR4-212ENST00000491833 OTOFQ9HC10 1997 aa18.48■□□□□ 0.55
SSR4-212ENST00000491833 CLRN2A0PK11 232 aa18.47■□□□□ 0.55
SSR4-212ENST00000491833 ANKRD18BA2A2Z9 1011 aa18.47■□□□□ 0.55
SSR4-212ENST00000491833 F8W031 263 aaPredicted RBP18.47■□□□□ 0.55
SSR4-212ENST00000491833 CSF1RP07333 972 aa18.47■□□□□ 0.55
SSR4-212ENST00000491833 IREB2P48200 963 aaKnown RBP18.47■□□□□ 0.55
SSR4-212ENST00000491833 CASP7P55210 303 aa18.47■□□□□ 0.55
SSR4-212ENST00000491833 TWISTNBQ3B726 338 aaPredicted RBP18.47■□□□□ 0.55
SSR4-212ENST00000491833 SUPT20HL1Q3ZLR7 823 aa18.47■□□□□ 0.55
SSR4-212ENST00000491833 OTUD7BQ6GQQ9 843 aa18.47■□□□□ 0.55
SSR4-212ENST00000491833 G2E3Q7L622 706 aa18.47■□□□□ 0.55
SSR4-212ENST00000491833 ZNF804AQ7Z570 1209 aa18.47■□□□□ 0.55
SSR4-212ENST00000491833 VEZTQ9HBM0 779 aa18.47■□□□□ 0.55
SSR4-212ENST00000491833 IRS2Q9Y4H2 1338 aa18.47■□□□□ 0.55
SSR4-212ENST00000491833 POTEFA5A3E0 1075 aa18.46■□□□□ 0.55
SSR4-212ENST00000491833 SPDYE2BA6NHP3 402 aa18.46■□□□□ 0.55
SSR4-212ENST00000491833 SLC4A2P04920 1241 aa18.46■□□□□ 0.55
SSR4-212ENST00000491833 SPDYE6P0CI01 402 aa18.46■□□□□ 0.55
SSR4-212ENST00000491833 FLIIQ13045 1269 aa18.46■□□□□ 0.55
SSR4-212ENST00000491833 CFAP100Q494V2 611 aa18.46■□□□□ 0.55
SSR4-212ENST00000491833 C15orf52Q6ZUT6 534 aaKnown RBP18.46■□□□□ 0.55
SSR4-212ENST00000491833 CD99L2Q8TCZ2 262 aa18.46■□□□□ 0.55
SSR4-212ENST00000491833 PTPN22Q9Y2R2 807 aa18.46■□□□□ 0.55
SSR4-212ENST00000491833 PCDHAC2Q9Y5I4 1007 aa18.46■□□□□ 0.55
SSR4-212ENST00000491833 HTTP42858 3142 aa18.45■□□□□ 0.54
SSR4-212ENST00000491833 FKBP1AP62942 108 aaKnown RBP18.45■□□□□ 0.54
SSR4-212ENST00000491833 CRHR2Q13324 411 aa18.45■□□□□ 0.54
SSR4-212ENST00000491833 DNAAF4Q8WXU2 420 aa18.45■□□□□ 0.54
SSR4-212ENST00000491833 ARAP2Q8WZ64 1704 aa18.45■□□□□ 0.54
SSR4-212ENST00000491833 SNAP23O00161 211 aa18.44■□□□□ 0.54
SSR4-212ENST00000491833 TAF5LO75529 589 aa18.44■□□□□ 0.54
SSR4-212ENST00000491833 IL1R1P14778 569 aa18.44■□□□□ 0.54
SSR4-212ENST00000491833 FKBP5Q13451 457 aaPredicted RBP18.44■□□□□ 0.54
SSR4-212ENST00000491833 HABP4Q5JVS0 413 aaKnown RBP18.44■□□□□ 0.54
SSR4-212ENST00000491833 NBPF12Q5TAG4 269 aaPredicted RBP18.44■□□□□ 0.54
SSR4-212ENST00000491833 ANKRD13AQ8IZ07 590 aa18.44■□□□□ 0.54
SSR4-212ENST00000491833 LINS1Q8NG48 757 aa18.44■□□□□ 0.54
SSR4-212ENST00000491833 EFCC1Q9HA90 598 aa18.44■□□□□ 0.54
SSR4-212ENST00000491833 RBM5P52756 815 aaKnown RBP eCLIP18.43■□□□□ 0.54
SSR4-212ENST00000491833 IFIT5Q13325 482 aaKnown RBP18.43■□□□□ 0.54
SSR4-212ENST00000491833 TNFAIP1Q13829 316 aa18.43■□□□□ 0.54
SSR4-212ENST00000491833 HELBQ8NG08 1087 aaPredicted RBP18.43■□□□□ 0.54
SSR4-212ENST00000491833 GJA5P36382 358 aa18.42■□□□□ 0.54
SSR4-212ENST00000491833 SP3Q02447 781 aa18.42■□□□□ 0.54
SSR4-212ENST00000491833 RASA3Q14644 834 aa18.42■□□□□ 0.54
SSR4-212ENST00000491833 ARMC5Q96C12 935 aa18.42■□□□□ 0.54
SSR4-212ENST00000491833 PRMT6Q96LA8 375 aaPredicted RBP18.42■□□□□ 0.54
SSR4-212ENST00000491833 CHMP3Q9Y3E7 222 aa18.42■□□□□ 0.54
SSR4-212ENST00000491833 USP2O75604 605 aaPredicted RBP18.41■□□□□ 0.54
SSR4-212ENST00000491833 CCDC27Q2M243 656 aa18.41■□□□□ 0.54
SSR4-212ENST00000491833 JAG2Q9Y219 1238 aa18.41■□□□□ 0.54
SSR4-212ENST00000491833 AOX1Q06278 1338 aa18.41■□□□□ 0.54
SSR4-212ENST00000491833 CACNA1FO60840 1977 aa18.41■□□□□ 0.54
SSR4-212ENST00000491833 TESPA1A2RU30 521 aaPredicted RBP18.4■□□□□ 0.54
SSR4-212ENST00000491833 OPTNQ96CV9 577 aa18.4■□□□□ 0.54
SSR4-212ENST00000491833 ELP3Q9H9T3 547 aa18.4■□□□□ 0.54
SSR4-212ENST00000491833 MKI67P46013 3256 aaKnown RBP18.4■□□□□ 0.54
SSR4-212ENST00000491833 PTPN18Q99952 460 aa18.39■□□□□ 0.53
SSR4-212ENST00000491833 TMEM106CQ9BVX2 250 aa18.39■□□□□ 0.53
SSR4-212ENST00000491833 BRCA2P51587 3418 aa18.39■□□□□ 0.53
SSR4-212ENST00000491833 ZNF316A6NFI3 1004 aaPredicted RBP18.38■□□□□ 0.53
SSR4-212ENST00000491833 EN2P19622 333 aaPredicted RBP18.38■□□□□ 0.53
SSR4-212ENST00000491833 FOXO4P98177 505 aa18.38■□□□□ 0.53
SSR4-212ENST00000491833 ARHGEF6Q15052 776 aa18.38■□□□□ 0.53
SSR4-212ENST00000491833 SPDYE2Q495Y8 402 aa18.38■□□□□ 0.53
SSR4-212ENST00000491833 TAF7LQ5H9L4 462 aa18.38■□□□□ 0.53
SSR4-212ENST00000491833 WWC1Q8IX03 1113 aa18.38■□□□□ 0.53
SSR4-212ENST00000491833 IL16Q14005 1332 aa18.38■□□□□ 0.53
SSR4-212ENST00000491833 CENPFP49454 3210 aa18.37■□□□□ 0.53
SSR4-212ENST00000491833 TAF1CQ15572 869 aaPredicted RBP18.37■□□□□ 0.53
SSR4-212ENST00000491833 MFSD14BQ5SR56 506 aa18.37■□□□□ 0.53
SSR4-212ENST00000491833 ZNF333Q96JL9 665 aa18.37■□□□□ 0.53
SSR4-212ENST00000491833 ZNF70Q9UC06 446 aaPredicted RBP18.37■□□□□ 0.53
SSR4-212ENST00000491833 SERPINA10Q9UK55 444 aa18.37■□□□□ 0.53
SSR4-212ENST00000491833 FAM205AQ6ZU69 1335 aa18.37■□□□□ 0.53
SSR4-212ENST00000491833 PLIN1O60240 522 aa18.36■□□□□ 0.53
SSR4-212ENST00000491833 CCDC57Q2TAC2 916 aa18.36■□□□□ 0.53
SSR4-212ENST00000491833 SLC9C1Q4G0N8 1177 aa18.36■□□□□ 0.53
SSR4-212ENST00000491833 LMBR1LQ6UX01 489 aa18.36■□□□□ 0.53
SSR4-212ENST00000491833 LDHAL6AQ6ZMR3 332 aa18.36■□□□□ 0.53
SSR4-212ENST00000491833 MS4A4AQ96JQ5 239 aa18.36■□□□□ 0.53
SSR4-212ENST00000491833 TDRD3Q9H7E2 651 aaKnown RBP18.36■□□□□ 0.53
SSR4-212ENST00000491833 ZFYVE28Q9HCC9 887 aa18.36■□□□□ 0.53
SSR4-212ENST00000491833 CNNM1Q9NRU3 951 aa18.36■□□□□ 0.53
SSR4-212ENST00000491833 FANCIQ9NVI1 1328 aa18.36■□□□□ 0.53
SSR4-212ENST00000491833 TTF2Q9UNY4 1162 aaKnown RBP18.36■□□□□ 0.53
SSR4-212ENST00000491833 KIAA0100Q14667 2235 aaKnown RBP18.35■□□□□ 0.53
SSR4-212ENST00000491833 CCL15-CCL14A0A0B4J2E2 113 aa18.35■□□□□ 0.53
SSR4-212ENST00000491833 TNNI2P48788 182 aa18.35■□□□□ 0.53
SSR4-212ENST00000491833 GTF2A2P52657 109 aa18.35■□□□□ 0.53
SSR4-212ENST00000491833 CAP1Q01518 475 aa18.35■□□□□ 0.53
SSR4-212ENST00000491833 CCL15Q16663 113 aa18.35■□□□□ 0.53
SSR4-212ENST00000491833 NBPF11Q86T75 865 aa18.35■□□□□ 0.53
SSR4-212ENST00000491833 BRI3BPQ8WY22 251 aa18.35■□□□□ 0.53
SSR4-212ENST00000491833 ZNF594Q96JF6 807 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms