RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 PPIP5K2O43314 1243 aa26.43■■□□□ 1.82
VCPKMT-204ENST00000491402 SEMA3EO15041 775 aa26.43■■□□□ 1.82
VCPKMT-204ENST00000491402 ZAP70P43403 619 aa26.43■■□□□ 1.82
VCPKMT-204ENST00000491402 EVI5LQ96CN4 794 aa26.43■■□□□ 1.82
VCPKMT-204ENST00000491402 CD209Q9NNX6 404 aa26.43■■□□□ 1.82
VCPKMT-204ENST00000491402 PAG1Q9NWQ8 432 aa26.43■■□□□ 1.82
VCPKMT-204ENST00000491402 CHD4Q14839 1912 aa26.42■■□□□ 1.82
VCPKMT-204ENST00000491402 GOLIM4O00461 696 aa26.42■■□□□ 1.82
VCPKMT-204ENST00000491402 ZBTB22O15209 634 aa26.42■■□□□ 1.82
VCPKMT-204ENST00000491402 C9orf131Q5VYM1 1079 aa26.42■■□□□ 1.82
VCPKMT-204ENST00000491402 LARGE2Q8N3Y3 721 aa26.42■■□□□ 1.82
VCPKMT-204ENST00000491402 TDRD7Q8NHU6 1098 aaKnown RBP26.42■■□□□ 1.82
VCPKMT-204ENST00000491402 RNF181Q9P0P0 153 aa26.42■■□□□ 1.82
VCPKMT-204ENST00000491402 FRAT2O75474 233 aaPredicted RBP26.41■■□□□ 1.82
VCPKMT-204ENST00000491402 IL1R1P14778 569 aa26.41■■□□□ 1.82
VCPKMT-204ENST00000491402 KIAA2012Q0VF49 1180 aa26.41■■□□□ 1.82
VCPKMT-204ENST00000491402 COA1Q9GZY4 146 aa26.41■■□□□ 1.82
VCPKMT-204ENST00000491402 DENND2AQ9ULE3 1009 aa26.41■■□□□ 1.82
VCPKMT-204ENST00000491402 MYO5AQ9Y4I1 1855 aaKnown RBP26.41■■□□□ 1.82
VCPKMT-204ENST00000491402 VPS33BQ9H267 617 aa26.41■■□□□ 1.82
VCPKMT-204ENST00000491402 ANTXR1Q9H6X2 564 aa26.41■■□□□ 1.82
VCPKMT-204ENST00000491402 CYP2E1P05181 493 aaPredicted RBP26.39■■□□□ 1.82
VCPKMT-204ENST00000491402 PDS5AQ29RF7 1337 aaKnown RBP26.39■■□□□ 1.82
VCPKMT-204ENST00000491402 DOK7Q18PE1 504 aa26.38■■□□□ 1.81
VCPKMT-204ENST00000491402 DOCK2Q92608 1830 aa26.38■■□□□ 1.81
VCPKMT-204ENST00000491402 MYH7P12883 1935 aa26.38■■□□□ 1.81
VCPKMT-204ENST00000491402 KBTBD3Q8NAB2 608 aa26.38■■□□□ 1.81
VCPKMT-204ENST00000491402 JDP2Q8WYK2 163 aa26.38■■□□□ 1.81
VCPKMT-204ENST00000491402 G3V3G9 751 aa26.37■■□□□ 1.81
VCPKMT-204ENST00000491402 DCAF8Q5TAQ9 597 aa26.37■■□□□ 1.81
VCPKMT-204ENST00000491402 FSD1Q9BTV5 496 aa26.37■■□□□ 1.81
VCPKMT-204ENST00000491402 COL4A5P29400 1685 aa26.37■■□□□ 1.81
VCPKMT-204ENST00000491402 TTF1Q15361 905 aaPredicted RBP26.36■■□□□ 1.81
VCPKMT-204ENST00000491402 DBNDD1Q9H9R9 158 aa26.36■■□□□ 1.81
VCPKMT-204ENST00000491402 CDC45O75419 566 aa26.35■■□□□ 1.81
VCPKMT-204ENST00000491402 CHAF1AQ13111 956 aaPredicted RBP26.35■■□□□ 1.81
VCPKMT-204ENST00000491402 NIM1KQ8IY84 436 aa26.35■■□□□ 1.81
VCPKMT-204ENST00000491402 SCN9AQ15858 1988 aa26.35■■□□□ 1.81
VCPKMT-204ENST00000491402 C8orf34Q49A92 452 aa26.35■■□□□ 1.81
VCPKMT-204ENST00000491402 TBC1D9Q6ZT07 1266 aa26.35■■□□□ 1.81
VCPKMT-204ENST00000491402 PODNQ7Z5L7 613 aa26.35■■□□□ 1.81
VCPKMT-204ENST00000491402 ECE2O60344 883 aa26.34■■□□□ 1.81
VCPKMT-204ENST00000491402 PIH1D3Q9NQM4 214 aaKnown RBP26.34■■□□□ 1.81
VCPKMT-204ENST00000491402 JAG2Q9Y219 1238 aa26.34■■□□□ 1.81
VCPKMT-204ENST00000491402 DICER1Q9UPY3 1922 aaKnown RBP26.34■■□□□ 1.81
VCPKMT-204ENST00000491402 RFX7Q2KHR2 1363 aa26.33■■□□□ 1.81
VCPKMT-204ENST00000491402 ZNRF3Q9ULT6 936 aa26.33■■□□□ 1.8
VCPKMT-204ENST00000491402 WDR66Q8TBY9 1149 aa26.32■■□□□ 1.8
VCPKMT-204ENST00000491402 FAM205AQ6ZU69 1335 aa26.31■■□□□ 1.8
VCPKMT-204ENST00000491402 KCNQ5Q9NR82 932 aa26.31■■□□□ 1.8
VCPKMT-204ENST00000491402 ABCF2Q9UG63 623 aa26.31■■□□□ 1.8
VCPKMT-204ENST00000491402 PSME4Q14997 1843 aa26.31■■□□□ 1.8
VCPKMT-204ENST00000491402 SALL1Q9NSC2 1324 aa26.31■■□□□ 1.8
VCPKMT-204ENST00000491402 ZNF646O15015 1829 aaPredicted RBP26.31■■□□□ 1.8
VCPKMT-204ENST00000491402 YDJCA8MPS7 323 aa26.3■■□□□ 1.8
VCPKMT-204ENST00000491402 IDH1O75874 414 aaKnown RBP26.3■■□□□ 1.8
VCPKMT-204ENST00000491402 CHMLP26374 656 aa26.3■■□□□ 1.8
VCPKMT-204ENST00000491402 FZD9O00144 591 aa26.3■■□□□ 1.8
VCPKMT-204ENST00000491402 GTF2IP78347 998 aa26.3■■□□□ 1.8
VCPKMT-204ENST00000491402 CASC1Q6TDU7 716 aa26.29■■□□□ 1.8
VCPKMT-204ENST00000491402 TICAM2Q86XR7 235 aa26.29■■□□□ 1.8
VCPKMT-204ENST00000491402 ZGPATQ8N5A5 531 aaKnown RBP26.29■■□□□ 1.8
VCPKMT-204ENST00000491402 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.29■■□□□ 1.8
VCPKMT-204ENST00000491402 DIAPH3Q9NSV4 1193 aa26.29■■□□□ 1.8
VCPKMT-204ENST00000491402 LRP2BPQ9P2M1 347 aa26.29■■□□□ 1.8
VCPKMT-204ENST00000491402 HIP1O00291 1037 aa26.28■■□□□ 1.8
VCPKMT-204ENST00000491402 TTLL5Q6EMB2 1281 aa26.28■■□□□ 1.8
VCPKMT-204ENST00000491402 CHGBP05060 677 aa26.28■■□□□ 1.8
VCPKMT-204ENST00000491402 MAP3K12Q12852 859 aa26.28■■□□□ 1.8
VCPKMT-204ENST00000491402 LRRFIP1Q32MZ4 808 aaKnown RBP26.28■■□□□ 1.8
VCPKMT-204ENST00000491402 MAST2Q6P0Q8 1798 aa26.27■■□□□ 1.8
VCPKMT-204ENST00000491402 RAD17O75943 681 aa26.27■■□□□ 1.8
VCPKMT-204ENST00000491402 MFSD14BQ5SR56 506 aa26.27■■□□□ 1.8
VCPKMT-204ENST00000491402 TBC1D22AQ8WUA7 517 aa26.27■■□□□ 1.8
VCPKMT-204ENST00000491402 FBXW7Q969H0 707 aa26.27■■□□□ 1.8
VCPKMT-204ENST00000491402 PRDX5P30044 214 aa26.26■■□□□ 1.79
VCPKMT-204ENST00000491402 EIF6P56537 245 aaKnown RBP26.26■■□□□ 1.79
VCPKMT-204ENST00000491402 CXCL9Q07325 125 aa26.26■■□□□ 1.79
VCPKMT-204ENST00000491402 TIAM2Q8IVF5 1701 aa26.26■■□□□ 1.79
VCPKMT-204ENST00000491402 ZNF541Q9H0D2 1346 aa26.26■■□□□ 1.79
VCPKMT-204ENST00000491402 RNF113AO15541 343 aaKnown RBP26.25■■□□□ 1.79
VCPKMT-204ENST00000491402 ZFYP08048 801 aaPredicted RBP26.25■■□□□ 1.79
VCPKMT-204ENST00000491402 SLC9C2Q5TAH2 1124 aa26.25■■□□□ 1.79
VCPKMT-204ENST00000491402 STRIP1Q5VSL9 837 aa26.25■■□□□ 1.79
VCPKMT-204ENST00000491402 ZSCAN25Q6NSZ9 544 aa26.25■■□□□ 1.79
VCPKMT-204ENST00000491402 CWC27Q6UX04 472 aaKnown RBP26.25■■□□□ 1.79
VCPKMT-204ENST00000491402 ERICH6Q7L0X2 663 aa26.25■■□□□ 1.79
VCPKMT-204ENST00000491402 BACH2Q9BYV9 841 aa26.25■■□□□ 1.79
VCPKMT-204ENST00000491402 ADD2P35612 726 aa26.25■■□□□ 1.79
VCPKMT-204ENST00000491402 SLFNL1Q499Z3 407 aa26.25■■□□□ 1.79
VCPKMT-204ENST00000491402 FAM227BQ96M60 508 aa26.25■■□□□ 1.79
VCPKMT-204ENST00000491402 RAI14Q9P0K7 980 aa26.25■■□□□ 1.79
VCPKMT-204ENST00000491402 USP17L3A6NCW0 530 aa26.24■■□□□ 1.79
VCPKMT-204ENST00000491402 USP17L4A6NCW7 530 aa26.24■■□□□ 1.79
VCPKMT-204ENST00000491402 PDE6AP16499 860 aa26.24■■□□□ 1.79
VCPKMT-204ENST00000491402 NMIQ13287 307 aaPredicted RBP26.24■■□□□ 1.79
VCPKMT-204ENST00000491402 SPTY2D1Q68D10 685 aaPredicted RBP26.24■■□□□ 1.79
VCPKMT-204ENST00000491402 USP17L1Q7RTZ2 530 aa26.24■■□□□ 1.79
VCPKMT-204ENST00000491402 ZC3H4Q9UPT8 1303 aaKnown RBP26.24■■□□□ 1.79
VCPKMT-204ENST00000491402 LDHBP07195 334 aaKnown RBP26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms