RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 APAF1O14727 1248 aa17.52■□□□□ 0.4
CTDSP1-210ENST00000491064 ITGA6P23229 1130 aa17.52■□□□□ 0.4
CTDSP1-210ENST00000491064 CRHR2Q13324 411 aa17.52■□□□□ 0.4
CTDSP1-210ENST00000491064 TSPYL6Q8N831 410 aa17.52■□□□□ 0.4
CTDSP1-210ENST00000491064 PLA2G12BQ9BX93 195 aa17.52■□□□□ 0.4
CTDSP1-210ENST00000491064 IRS2Q9Y4H2 1338 aa17.51■□□□□ 0.39
CTDSP1-210ENST00000491064 A0A1B0GUL6 1792 aa17.51■□□□□ 0.39
CTDSP1-210ENST00000491064 CEP290O15078 2479 aa17.51■□□□□ 0.39
CTDSP1-210ENST00000491064 EN2P19622 333 aaPredicted RBP17.51■□□□□ 0.39
CTDSP1-210ENST00000491064 GJA5P36382 358 aa17.51■□□□□ 0.39
CTDSP1-210ENST00000491064 CAP1Q01518 475 aa17.51■□□□□ 0.39
CTDSP1-210ENST00000491064 MPHOSPH8Q99549 860 aa17.51■□□□□ 0.39
CTDSP1-210ENST00000491064 EFCC1Q9HA90 598 aa17.51■□□□□ 0.39
CTDSP1-210ENST00000491064 OTOFQ9HC10 1997 aa17.51■□□□□ 0.39
CTDSP1-210ENST00000491064 CLRN2A0PK11 232 aa17.5■□□□□ 0.39
CTDSP1-210ENST00000491064 KCNJ4P48050 445 aa17.5■□□□□ 0.39
CTDSP1-210ENST00000491064 CHRNDQ07001 517 aa17.5■□□□□ 0.39
CTDSP1-210ENST00000491064 SUPT20HL1Q3ZLR7 823 aa17.5■□□□□ 0.39
CTDSP1-210ENST00000491064 NBPF12Q5TAG4 269 aaPredicted RBP17.5■□□□□ 0.39
CTDSP1-210ENST00000491064 OTUD7BQ6GQQ9 843 aa17.5■□□□□ 0.39
CTDSP1-210ENST00000491064 SZT2Q5T011 3432 aa17.49■□□□□ 0.39
CTDSP1-210ENST00000491064 SPDYE2BA6NHP3 402 aa17.49■□□□□ 0.39
CTDSP1-210ENST00000491064 SNAP23O00161 211 aa17.49■□□□□ 0.39
CTDSP1-210ENST00000491064 USP2O75604 605 aaPredicted RBP17.49■□□□□ 0.39
CTDSP1-210ENST00000491064 CSF1RP07333 972 aa17.49■□□□□ 0.39
CTDSP1-210ENST00000491064 SPDYE6P0CI01 402 aa17.49■□□□□ 0.39
CTDSP1-210ENST00000491064 IREB2P48200 963 aaKnown RBP17.49■□□□□ 0.39
CTDSP1-210ENST00000491064 FXR1P51114 621 aaKnown RBP eCLIP17.49■□□□□ 0.39
CTDSP1-210ENST00000491064 CASP7P55210 303 aa17.49■□□□□ 0.39
CTDSP1-210ENST00000491064 SP3Q02447 781 aa17.49■□□□□ 0.39
CTDSP1-210ENST00000491064 CFAP100Q494V2 611 aa17.49■□□□□ 0.39
CTDSP1-210ENST00000491064 PRMT6Q96LA8 375 aaPredicted RBP17.49■□□□□ 0.39
CTDSP1-210ENST00000491064 PTPN18Q99952 460 aa17.49■□□□□ 0.39
CTDSP1-210ENST00000491064 AOX1Q06278 1338 aa17.48■□□□□ 0.39
CTDSP1-210ENST00000491064 TESPA1A2RU30 521 aaPredicted RBP17.48■□□□□ 0.39
CTDSP1-210ENST00000491064 F8W031 263 aaPredicted RBP17.48■□□□□ 0.39
CTDSP1-210ENST00000491064 MYO1BO43795 1136 aa17.48■□□□□ 0.39
CTDSP1-210ENST00000491064 GCKRQ14397 625 aa17.48■□□□□ 0.39
CTDSP1-210ENST00000491064 C15orf52Q6ZUT6 534 aaKnown RBP17.48■□□□□ 0.39
CTDSP1-210ENST00000491064 G2E3Q7L622 706 aa17.48■□□□□ 0.39
CTDSP1-210ENST00000491064 STK31Q9BXU1 1019 aa17.48■□□□□ 0.39
CTDSP1-210ENST00000491064 VEZTQ9HBM0 779 aa17.48■□□□□ 0.39
CTDSP1-210ENST00000491064 DDX10Q13206 875 aaKnown RBP17.47■□□□□ 0.39
CTDSP1-210ENST00000491064 ANKRD13AQ8IZ07 590 aa17.47■□□□□ 0.39
CTDSP1-210ENST00000491064 TAF5LO75529 589 aa17.46■□□□□ 0.39
CTDSP1-210ENST00000491064 IL1R1P14778 569 aa17.46■□□□□ 0.39
CTDSP1-210ENST00000491064 FKBP1AP62942 108 aaKnown RBP17.46■□□□□ 0.39
CTDSP1-210ENST00000491064 RASA3Q14644 834 aa17.46■□□□□ 0.39
CTDSP1-210ENST00000491064 ZNF333Q96JL9 665 aa17.46■□□□□ 0.39
CTDSP1-210ENST00000491064 TRIOBPQ9H2D6 2365 aa17.46■□□□□ 0.39
CTDSP1-210ENST00000491064 ZNF804AQ7Z570 1209 aa17.45■□□□□ 0.38
CTDSP1-210ENST00000491064 HELBQ8NG08 1087 aaPredicted RBP17.45■□□□□ 0.38
CTDSP1-210ENST00000491064 OPTNQ96CV9 577 aa17.45■□□□□ 0.38
CTDSP1-210ENST00000491064 TMEM106CQ9BVX2 250 aa17.45■□□□□ 0.38
CTDSP1-210ENST00000491064 ANKRD18BA2A2Z9 1011 aa17.44■□□□□ 0.38
CTDSP1-210ENST00000491064 SLC4A2P04920 1241 aa17.44■□□□□ 0.38
CTDSP1-210ENST00000491064 TSR2Q969E8 191 aaKnown RBP17.44■□□□□ 0.38
CTDSP1-210ENST00000491064 MS4A4AQ96JQ5 239 aa17.44■□□□□ 0.38
CTDSP1-210ENST00000491064 ELP3Q9H9T3 547 aa17.44■□□□□ 0.38
CTDSP1-210ENST00000491064 JAG2Q9Y219 1238 aa17.44■□□□□ 0.38
CTDSP1-210ENST00000491064 CACNA1FO60840 1977 aa17.43■□□□□ 0.38
CTDSP1-210ENST00000491064 RBM5P52756 815 aaKnown RBP eCLIP17.43■□□□□ 0.382e-6■■□□□ 11.9
CTDSP1-210ENST00000491064 MYH16Q9H6N6 1097 aa17.43■□□□□ 0.38
CTDSP1-210ENST00000491064 COLQQ9Y215 455 aaPredicted RBP17.43■□□□□ 0.38
CTDSP1-210ENST00000491064 PTCH2Q9Y6C5 1203 aa17.43■□□□□ 0.38
CTDSP1-210ENST00000491064 FLIIQ13045 1269 aa17.42■□□□□ 0.38
CTDSP1-210ENST00000491064 TNFAIP1Q13829 316 aa17.42■□□□□ 0.38
CTDSP1-210ENST00000491064 TWISTNBQ3B726 338 aaPredicted RBP17.42■□□□□ 0.38
CTDSP1-210ENST00000491064 SPDYE2Q495Y8 402 aa17.42■□□□□ 0.38
CTDSP1-210ENST00000491064 SLC9C1Q4G0N8 1177 aa17.42■□□□□ 0.38
CTDSP1-210ENST00000491064 BRI3BPQ8WY22 251 aa17.42■□□□□ 0.38
CTDSP1-210ENST00000491064 ARAP2Q8WZ64 1704 aa17.41■□□□□ 0.38
CTDSP1-210ENST00000491064 IFIT5Q13325 482 aaKnown RBP17.41■□□□□ 0.38
CTDSP1-210ENST00000491064 ARHGEF6Q15052 776 aa17.41■□□□□ 0.38
CTDSP1-210ENST00000491064 TAF1CQ15572 869 aaPredicted RBP17.41■□□□□ 0.38
CTDSP1-210ENST00000491064 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.41■□□□□ 0.38
CTDSP1-210ENST00000491064 NBPF11Q86T75 865 aa17.41■□□□□ 0.38
CTDSP1-210ENST00000491064 LINS1Q8NG48 757 aa17.41■□□□□ 0.38
CTDSP1-210ENST00000491064 CNKSR2Q8WXI2 1034 aa17.41■□□□□ 0.38
CTDSP1-210ENST00000491064 DNAAF4Q8WXU2 420 aa17.41■□□□□ 0.38
CTDSP1-210ENST00000491064 TEPSINQ96N21 525 aa17.41■□□□□ 0.38
CTDSP1-210ENST00000491064 ZFYVE28Q9HCC9 887 aa17.41■□□□□ 0.38
CTDSP1-210ENST00000491064 ZNF70Q9UC06 446 aaPredicted RBP17.41■□□□□ 0.38
CTDSP1-210ENST00000491064 RANBP2P49792 3224 aaKnown RBP17.4■□□□□ 0.38
CTDSP1-210ENST00000491064 ZSWIM8A7E2V4 1837 aa17.4■□□□□ 0.38
CTDSP1-210ENST00000491064 CCL15-CCL14A0A0B4J2E2 113 aa17.4■□□□□ 0.38
CTDSP1-210ENST00000491064 FOXO4P98177 505 aa17.4■□□□□ 0.38
CTDSP1-210ENST00000491064 CCL15Q16663 113 aa17.4■□□□□ 0.38
CTDSP1-210ENST00000491064 CDAN1Q8IWY9 1227 aa17.4■□□□□ 0.38
CTDSP1-210ENST00000491064 PRKRIP1Q9H875 184 aaPredicted RBP17.4■□□□□ 0.38
CTDSP1-210ENST00000491064 FAM205AQ6ZU69 1335 aa17.4■□□□□ 0.38
CTDSP1-210ENST00000491064 GTF2A2P52657 109 aa17.39■□□□□ 0.37
CTDSP1-210ENST00000491064 FKBP5Q13451 457 aaPredicted RBP17.39■□□□□ 0.37
CTDSP1-210ENST00000491064 VGLL4Q14135 290 aa17.39■□□□□ 0.37
CTDSP1-210ENST00000491064 SLC4A8Q2Y0W8 1093 aa17.39■□□□□ 0.37
CTDSP1-210ENST00000491064 FAM43AQ8N2R8 423 aa17.39■□□□□ 0.37
CTDSP1-210ENST00000491064 TDRD3Q9H7E2 651 aaKnown RBP17.39■□□□□ 0.37
CTDSP1-210ENST00000491064 SERPINA10Q9UK55 444 aa17.39■□□□□ 0.37
CTDSP1-210ENST00000491064 MAP3K9P80192 1104 aa17.38■□□□□ 0.37
CTDSP1-210ENST00000491064 MFSD14BQ5SR56 506 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms