RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 HMG20BQ9P0W2 317 aa22.68■■□□□ 1.22
MCF2L-230ENST00000491028 CHD4Q14839 1912 aa22.68■■□□□ 1.22
MCF2L-230ENST00000491028 COL4A5P29400 1685 aa22.68■■□□□ 1.22
MCF2L-230ENST00000491028 DOK7Q18PE1 504 aa22.67■■□□□ 1.22
MCF2L-230ENST00000491028 BMP2KLQ5H9B9 411 aa22.67■■□□□ 1.22
MCF2L-230ENST00000491028 NIM1KQ8IY84 436 aa22.67■■□□□ 1.22
MCF2L-230ENST00000491028 DBNDD1Q9H9R9 158 aa22.67■■□□□ 1.22
MCF2L-230ENST00000491028 IQSEC3Q9UPP2 1182 aaPredicted RBP22.67■■□□□ 1.22
MCF2L-230ENST00000491028 ZNF646O15015 1829 aaPredicted RBP22.66■■□□□ 1.22
MCF2L-230ENST00000491028 DOCK2Q92608 1830 aa22.66■■□□□ 1.22
MCF2L-230ENST00000491028 FAM205AQ6ZU69 1335 aa22.66■■□□□ 1.22
MCF2L-230ENST00000491028 GSPT1P15170 499 aaKnown RBP22.66■■□□□ 1.22
MCF2L-230ENST00000491028 LMNB1P20700 586 aa22.66■■□□□ 1.22
MCF2L-230ENST00000491028 ZAP70P43403 619 aa22.66■■□□□ 1.22
MCF2L-230ENST00000491028 DNAJC2Q99543 621 aaKnown RBP22.66■■□□□ 1.22
MCF2L-230ENST00000491028 TTF1Q15361 905 aaPredicted RBP22.65■■□□□ 1.22
MCF2L-230ENST00000491028 JDP2Q8WYK2 163 aa22.65■■□□□ 1.22
MCF2L-230ENST00000491028 PAG1Q9NWQ8 432 aa22.65■■□□□ 1.22
MCF2L-230ENST00000491028 SCN9AQ15858 1988 aa22.65■■□□□ 1.22
MCF2L-230ENST00000491028 SALL1Q9NSC2 1324 aa22.64■■□□□ 1.22
MCF2L-230ENST00000491028 PI16Q6UXB8 463 aa22.64■■□□□ 1.21
MCF2L-230ENST00000491028 CNTROBQ8N137 903 aa22.64■■□□□ 1.21
MCF2L-230ENST00000491028 WDR66Q8TBY9 1149 aa22.64■■□□□ 1.21
MCF2L-230ENST00000491028 SNRKQ9NRH2 765 aa22.64■■□□□ 1.21
MCF2L-230ENST00000491028 ZNRF3Q9ULT6 936 aa22.64■■□□□ 1.21
MCF2L-230ENST00000491028 TIAM2Q8IVF5 1701 aa22.64■■□□□ 1.21
MCF2L-230ENST00000491028 PRELPP51888 382 aa22.63■■□□□ 1.21
MCF2L-230ENST00000491028 ZGPATQ8N5A5 531 aaKnown RBP22.63■■□□□ 1.21
MCF2L-230ENST00000491028 TBC1D22AQ8WUA7 517 aa22.63■■□□□ 1.21
MCF2L-230ENST00000491028 EVI5LQ96CN4 794 aa22.63■■□□□ 1.21
MCF2L-230ENST00000491028 MAST2Q6P0Q8 1798 aa22.63■■□□□ 1.21
MCF2L-230ENST00000491028 TRIM6-TRIM34B2RNG4 842 aa22.62■■□□□ 1.21
MCF2L-230ENST00000491028 GOLIM4O00461 696 aa22.62■■□□□ 1.21
MCF2L-230ENST00000491028 IGSF3O75054 1194 aa22.62■■□□□ 1.21
MCF2L-230ENST00000491028 CYP2E1P05181 493 aaPredicted RBP22.62■■□□□ 1.21
MCF2L-230ENST00000491028 CHAF1AQ13111 956 aaPredicted RBP22.62■■□□□ 1.21
MCF2L-230ENST00000491028 NDUFB9Q9Y6M9 179 aa22.62■■□□□ 1.21
MCF2L-230ENST00000491028 MYH7P12883 1935 aa22.62■■□□□ 1.21
MCF2L-230ENST00000491028 RFX7Q2KHR2 1363 aa22.62■■□□□ 1.21
MCF2L-230ENST00000491028 YDJCA8MPS7 323 aa22.61■■□□□ 1.21
MCF2L-230ENST00000491028 MAP4K4O95819 1239 aaPredicted RBP22.61■■□□□ 1.21
MCF2L-230ENST00000491028 SDSP20132 328 aa22.61■■□□□ 1.21
MCF2L-230ENST00000491028 FKBP1AP62942 108 aaKnown RBP22.61■■□□□ 1.21
MCF2L-230ENST00000491028 GTF2IP78347 998 aa22.61■■□□□ 1.21
MCF2L-230ENST00000491028 STRIP1Q5VSL9 837 aa22.61■■□□□ 1.21
MCF2L-230ENST00000491028 TICAM2Q86XR7 235 aa22.61■■□□□ 1.21
MCF2L-230ENST00000491028 USP17L3A6NCW0 530 aa22.6■■□□□ 1.21
MCF2L-230ENST00000491028 USP17L4A6NCW7 530 aa22.6■■□□□ 1.21
MCF2L-230ENST00000491028 DCAF8L1A6NGE4 600 aa22.6■■□□□ 1.21
MCF2L-230ENST00000491028 TTLL5Q6EMB2 1281 aa22.6■■□□□ 1.21
MCF2L-230ENST00000491028 USP17L1Q7RTZ2 530 aa22.6■■□□□ 1.21
MCF2L-230ENST00000491028 KBTBD3Q8NAB2 608 aa22.6■■□□□ 1.21
MCF2L-230ENST00000491028 RILPL2Q969X0 211 aa22.6■■□□□ 1.21
MCF2L-230ENST00000491028 EDC3Q96F86 508 aaKnown RBP22.6■■□□□ 1.21
MCF2L-230ENST00000491028 MYO5AQ9Y4I1 1855 aaKnown RBP22.6■■□□□ 1.21
MCF2L-230ENST00000491028 GOLGB1Q14789 3259 aaKnown RBP22.59■■□□□ 1.21
MCF2L-230ENST00000491028 ANTXR1Q9H6X2 564 aa22.59■■□□□ 1.21
MCF2L-230ENST00000491028 LRRFIP1Q32MZ4 808 aaKnown RBP22.58■■□□□ 1.21
MCF2L-230ENST00000491028 SPTY2D1Q68D10 685 aaPredicted RBP22.58■■□□□ 1.21
MCF2L-230ENST00000491028 FBXW7Q969H0 707 aa22.58■■□□□ 1.21
MCF2L-230ENST00000491028 FSD1Q9BTV5 496 aa22.58■■□□□ 1.21
MCF2L-230ENST00000491028 PIH1D3Q9NQM4 214 aaKnown RBP22.58■■□□□ 1.21
MCF2L-230ENST00000491028 SUGT1Q9Y2Z0 365 aa22.58■■□□□ 1.21
MCF2L-230ENST00000491028 MYO3BQ8WXR4 1341 aa22.57■■□□□ 1.2
MCF2L-230ENST00000491028 FZD9O00144 591 aa22.57■■□□□ 1.2
MCF2L-230ENST00000491028 MFSD14BQ5SR56 506 aa22.57■■□□□ 1.2
MCF2L-230ENST00000491028 DACT2Q5SW24 774 aa22.57■■□□□ 1.2
MCF2L-230ENST00000491028 TMED8Q6PL24 325 aaPredicted RBP22.57■■□□□ 1.2
MCF2L-230ENST00000491028 RNF181Q9P0P0 153 aa22.57■■□□□ 1.2
MCF2L-230ENST00000491028 ABCF2Q9UG63 623 aa22.57■■□□□ 1.2
MCF2L-230ENST00000491028 JAG2Q9Y219 1238 aa22.57■■□□□ 1.2
MCF2L-230ENST00000491028 EIF6P56537 245 aaKnown RBP22.56■■□□□ 1.2
MCF2L-230ENST00000491028 CIAPIN1Q6FI81 312 aa22.56■■□□□ 1.2
MCF2L-230ENST00000491028 ZSCAN25Q6NSZ9 544 aa22.56■■□□□ 1.2
MCF2L-230ENST00000491028 TBC1D9Q6ZT07 1266 aa22.56■■□□□ 1.2
MCF2L-230ENST00000491028 ERICH6Q7L0X2 663 aa22.56■■□□□ 1.2
MCF2L-230ENST00000491028 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.56■■□□□ 1.2
MCF2L-230ENST00000491028 KCNQ5Q9NR82 932 aa22.56■■□□□ 1.2
MCF2L-230ENST00000491028 LRP2BPQ9P2M1 347 aa22.56■■□□□ 1.2
MCF2L-230ENST00000491028 ZC3H4Q9UPT8 1303 aaKnown RBP22.56■■□□□ 1.2
MCF2L-230ENST00000491028 HIP1O00291 1037 aa22.55■■□□□ 1.2
MCF2L-230ENST00000491028 VIL1P09327 827 aaKnown RBP22.55■■□□□ 1.2
MCF2L-230ENST00000491028 YY1P25490 414 aa22.55■■□□□ 1.2
MCF2L-230ENST00000491028 MAP3K12Q12852 859 aa22.55■■□□□ 1.2
MCF2L-230ENST00000491028 TNIP1Q15025 636 aa22.55■■□□□ 1.2
MCF2L-230ENST00000491028 C9orf131Q5VYM1 1079 aa22.55■■□□□ 1.2
MCF2L-230ENST00000491028 PSMD14O00487 310 aa22.54■■□□□ 1.2
MCF2L-230ENST00000491028 IDH1O75874 414 aaKnown RBP22.54■■□□□ 1.2
MCF2L-230ENST00000491028 RAD17O75943 681 aa22.54■■□□□ 1.2
MCF2L-230ENST00000491028 LDHBP07195 334 aaKnown RBP22.54■■□□□ 1.2
MCF2L-230ENST00000491028 ZFYP08048 801 aaPredicted RBP22.54■■□□□ 1.2
MCF2L-230ENST00000491028 CXCL9Q07325 125 aa22.54■■□□□ 1.2
MCF2L-230ENST00000491028 PRDX5P30044 214 aa22.53■■□□□ 1.2
MCF2L-230ENST00000491028 RSBN1LQ6PCB5 846 aaPredicted RBP22.53■■□□□ 1.2
MCF2L-230ENST00000491028 RAI14Q9P0K7 980 aa22.53■■□□□ 1.2
MCF2L-230ENST00000491028 MAST3O60307 1309 aa22.53■■□□□ 1.2
MCF2L-230ENST00000491028 CDC45O75419 566 aa22.52■■□□□ 1.2
MCF2L-230ENST00000491028 DZIP1Q86YF9 867 aaKnown RBP22.52■■□□□ 1.2
MCF2L-230ENST00000491028 CERS5Q8N5B7 392 aa22.52■■□□□ 1.2
MCF2L-230ENST00000491028 ADD2P35612 726 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms