RNA–Protein interactions for RNA: ENST00000490832.1

FNDC3B-211, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 772 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-211ENST00000490832 FAM182BQ5T319 152 aa11.53□□□□□ -0.56
FNDC3B-211ENST00000490832 STRN4Q9NRL3 753 aa11.53□□□□□ -0.56
FNDC3B-211ENST00000490832 RGS17Q9UGC6 210 aaPredicted RBP11.53□□□□□ -0.56
FNDC3B-211ENST00000490832 FNDC3AQ9Y2H6 1198 aaKnown RBP11.53□□□□□ -0.56
FNDC3B-211ENST00000490832 USP20Q9Y2K6 914 aa11.53□□□□□ -0.56
FNDC3B-211ENST00000490832 ADAMTS13Q76LX8 1427 aa11.52□□□□□ -0.56
FNDC3B-211ENST00000490832 CD33P20138 364 aa11.52□□□□□ -0.57
FNDC3B-211ENST00000490832 NFX1Q12986 1120 aaKnown RBP11.52□□□□□ -0.57
FNDC3B-211ENST00000490832 TTC16Q8NEE8 873 aa11.52□□□□□ -0.57
FNDC3B-211ENST00000490832 KCNMB2Q9Y691 235 aa11.52□□□□□ -0.57
FNDC3B-211ENST00000490832 MSH6P52701 1360 aa11.52□□□□□ -0.57
FNDC3B-211ENST00000490832 GJD3Q8N144 294 aa11.51□□□□□ -0.57
FNDC3B-211ENST00000490832 GPR161Q8N6U8 529 aaKnown RBP11.51□□□□□ -0.57
FNDC3B-211ENST00000490832 RBCK1Q9BYM8 510 aa11.51□□□□□ -0.57
FNDC3B-211ENST00000490832 HCN2Q9UL51 889 aa11.51□□□□□ -0.57
FNDC3B-211ENST00000490832 EGFRP00533 1210 aa11.5□□□□□ -0.57
FNDC3B-211ENST00000490832 EHHADHQ08426 723 aa11.5□□□□□ -0.57
FNDC3B-211ENST00000490832 PDE3BQ13370 1112 aa11.5□□□□□ -0.57
FNDC3B-211ENST00000490832 GAS6Q14393 721 aa11.5□□□□□ -0.57
FNDC3B-211ENST00000490832 TRIP4Q15650 581 aaPredicted RBP11.5□□□□□ -0.57
FNDC3B-211ENST00000490832 PODXL2Q9NZ53 605 aa11.5□□□□□ -0.57
FNDC3B-211ENST00000490832 ERBB4Q15303 1308 aa11.5□□□□□ -0.57
FNDC3B-211ENST00000490832 PHLPP1O60346 1717 aa11.49□□□□□ -0.57
FNDC3B-211ENST00000490832 XYLBO75191 536 aa11.49□□□□□ -0.57
FNDC3B-211ENST00000490832 MX2P20592 715 aa11.49□□□□□ -0.57
FNDC3B-211ENST00000490832 EFCC1Q9HA90 598 aa11.49□□□□□ -0.57
FNDC3B-211ENST00000490832 MBIPQ9NS73 344 aa11.49□□□□□ -0.57
FNDC3B-211ENST00000490832 PTPRUQ92729 1446 aa11.49□□□□□ -0.57
FNDC3B-211ENST00000490832 SPHKAPQ2M3C7 1700 aa11.49□□□□□ -0.57
FNDC3B-211ENST00000490832 CTBSQ01459 385 aa11.48□□□□□ -0.57
FNDC3B-211ENST00000490832 SPEM2Q0P670 501 aa11.48□□□□□ -0.57
FNDC3B-211ENST00000490832 CCINQ13939 588 aa11.48□□□□□ -0.57
FNDC3B-211ENST00000490832 C8orf34Q49A92 452 aa11.48□□□□□ -0.57
FNDC3B-211ENST00000490832 ZSCAN29Q8IWY8 852 aaPredicted RBP11.48□□□□□ -0.57
FNDC3B-211ENST00000490832 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.48□□□□□ -0.57
FNDC3B-211ENST00000490832 NSFL1CQ9UNZ2 370 aaKnown RBP11.48□□□□□ -0.57
FNDC3B-211ENST00000490832 TBX22Q9Y458 520 aa11.48□□□□□ -0.57
FNDC3B-211ENST00000490832 BMP4P12644 408 aa11.47□□□□□ -0.57
FNDC3B-211ENST00000490832 MFAP1P55081 439 aaKnown RBP11.47□□□□□ -0.57
FNDC3B-211ENST00000490832 ZNF326Q5BKZ1 582 aaKnown RBP11.47□□□□□ -0.57
FNDC3B-211ENST00000490832 TMC1Q8TDI8 760 aa11.47□□□□□ -0.57
FNDC3B-211ENST00000490832 ASB16Q96NS5 453 aa11.47□□□□□ -0.57
FNDC3B-211ENST00000490832 FAM129BQ96TA1 746 aa11.47□□□□□ -0.57
FNDC3B-211ENST00000490832 COL25A1Q9BXS0 654 aaPredicted RBP11.47□□□□□ -0.57
FNDC3B-211ENST00000490832 GSX2Q9BZM3 304 aa11.47□□□□□ -0.57
FNDC3B-211ENST00000490832 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.46□□□□□ -0.57
FNDC3B-211ENST00000490832 CLTCL1P53675 1640 aa11.46□□□□□ -0.57
FNDC3B-211ENST00000490832 NRXN3Q9Y4C0 1643 aa11.46□□□□□ -0.57
FNDC3B-211ENST00000490832 NEUROD1Q13562 356 aa11.46□□□□□ -0.57
FNDC3B-211ENST00000490832 PDE12Q6L8Q7 609 aaKnown RBP11.46□□□□□ -0.57
FNDC3B-211ENST00000490832 DMRTB1Q96MA1 342 aa11.46□□□□□ -0.57
FNDC3B-211ENST00000490832 PNMA5Q96PV4 448 aa11.46□□□□□ -0.57
FNDC3B-211ENST00000490832 SLC30A3Q99726 388 aa11.46□□□□□ -0.57
FNDC3B-211ENST00000490832 GGNBP2Q9H3C7 697 aa11.46□□□□□ -0.57
FNDC3B-211ENST00000490832 AMOTL2Q9Y2J4 779 aa11.46□□□□□ -0.57
FNDC3B-211ENST00000490832 CCDC9Q9Y3X0 531 aaKnown RBP11.46□□□□□ -0.57
FNDC3B-211ENST00000490832 DIP2AQ14689 1571 aa11.45□□□□□ -0.58
FNDC3B-211ENST00000490832 MAP2K3P46734 347 aa11.45□□□□□ -0.58
FNDC3B-211ENST00000490832 GRIN2CQ14957 1233 aa11.45□□□□□ -0.58
FNDC3B-211ENST00000490832 ZNF775Q96BV0 537 aaPredicted RBP11.45□□□□□ -0.58
FNDC3B-211ENST00000490832 PRR12Q9ULL5 1215 aa11.45□□□□□ -0.58
FNDC3B-211ENST00000490832 COL16A1Q07092 1604 aaPredicted RBP11.45□□□□□ -0.58
FNDC3B-211ENST00000490832 TRPM2O94759 1503 aa11.45□□□□□ -0.58
FNDC3B-211ENST00000490832 WFS1O76024 890 aa11.44□□□□□ -0.58
FNDC3B-211ENST00000490832 XKR5Q6UX68 686 aa11.44□□□□□ -0.58
FNDC3B-211ENST00000490832 TMC7Q7Z402 723 aa11.44□□□□□ -0.58
FNDC3B-211ENST00000490832 ZNF438Q7Z4V0 828 aa11.44□□□□□ -0.58
FNDC3B-211ENST00000490832 NLRP13Q86W25 1043 aa11.44□□□□□ -0.58
FNDC3B-211ENST00000490832 NAIPQ13075 1403 aa11.43□□□□□ -0.58
FNDC3B-211ENST00000490832 RRBP1Q9P2E9 1410 aaKnown RBP11.43□□□□□ -0.58
FNDC3B-211ENST00000490832 METP08581 1390 aa11.43□□□□□ -0.58
FNDC3B-211ENST00000490832 ERCC3P19447 782 aa11.43□□□□□ -0.58
FNDC3B-211ENST00000490832 RNFT1Q5M7Z0 435 aa11.43□□□□□ -0.58
FNDC3B-211ENST00000490832 BHMTQ93088 406 aa11.43□□□□□ -0.58
FNDC3B-211ENST00000490832 AVENQ9NQS1 362 aaPredicted RBP11.43□□□□□ -0.58
FNDC3B-211ENST00000490832 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.43□□□□□ -0.58
FNDC3B-211ENST00000490832 SETD1AO15047 1707 aaKnown RBP11.43□□□□□ -0.58
FNDC3B-211ENST00000490832 XRN1Q8IZH2 1706 aaKnown RBP11.43□□□□□ -0.58
FNDC3B-211ENST00000490832 LRP6O75581 1613 aa11.42□□□□□ -0.58
FNDC3B-211ENST00000490832 A6NHS1 94 aa11.42□□□□□ -0.58
FNDC3B-211ENST00000490832 C2CD2LO14523 706 aa11.42□□□□□ -0.58
FNDC3B-211ENST00000490832 ATF3P18847 181 aa11.42□□□□□ -0.58
FNDC3B-211ENST00000490832 ZNF468Q5VIY5 522 aaPredicted RBP11.42□□□□□ -0.58
FNDC3B-211ENST00000490832 DNAJC14Q6Y2X3 702 aaPredicted RBP11.42□□□□□ -0.58
FNDC3B-211ENST00000490832 KRT25Q7Z3Z0 450 aa11.42□□□□□ -0.58
FNDC3B-211ENST00000490832 ALKBH8Q96BT7 664 aaKnown RBP11.42□□□□□ -0.58
FNDC3B-211ENST00000490832 C19orf44Q9H6X5 657 aa11.42□□□□□ -0.58
FNDC3B-211ENST00000490832 PIK3R4Q99570 1358 aa11.41□□□□□ -0.58
FNDC3B-211ENST00000490832 JCADQ9P266 1359 aa11.41□□□□□ -0.58
FNDC3B-211ENST00000490832 SETBP1Q9Y6X0 1596 aa11.41□□□□□ -0.58
FNDC3B-211ENST00000490832 NEXMIFQ5QGS0 1516 aa11.41□□□□□ -0.58
FNDC3B-211ENST00000490832 GPR182O15218 404 aa11.41□□□□□ -0.58
FNDC3B-211ENST00000490832 SASH3O75995 380 aa11.41□□□□□ -0.58
FNDC3B-211ENST00000490832 IGHA2P01877 340 aa11.41□□□□□ -0.58
FNDC3B-211ENST00000490832 RARAP10276 462 aa11.41□□□□□ -0.58
FNDC3B-211ENST00000490832 NFKB1P19838 968 aa11.41□□□□□ -0.58
FNDC3B-211ENST00000490832 SRSF11Q05519 484 aaKnown RBP11.41□□□□□ -0.58
FNDC3B-211ENST00000490832 RAB44Q7Z6P3 723 aaPredicted RBP11.41□□□□□ -0.58
FNDC3B-211ENST00000490832 ELP3Q9H9T3 547 aa11.41□□□□□ -0.58
FNDC3B-211ENST00000490832 ARAFP10398 606 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms