RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 MICALL2Q8IY33 904 aa11.52□□□□□ -0.56
SUPT20H-220ENST00000490716 PA2G4Q9UQ80 394 aaKnown RBP11.52□□□□□ -0.56
SUPT20H-220ENST00000490716 PUM3Q15397 648 aaKnown RBP11.52□□□□□ -0.57
SUPT20H-220ENST00000490716 HELBQ8NG08 1087 aaPredicted RBP11.52□□□□□ -0.57
SUPT20H-220ENST00000490716 ZC3H12CQ9C0D7 883 aaKnown RBP11.52□□□□□ -0.57
SUPT20H-220ENST00000490716 NAV1Q8NEY1 1877 aa11.52□□□□□ -0.57
SUPT20H-220ENST00000490716 PANK1Q8TE04 598 aa11.52□□□□□ -0.57
SUPT20H-220ENST00000490716 GNAI2P04899 355 aa11.51□□□□□ -0.57
SUPT20H-220ENST00000490716 MPHOSPH8Q99549 860 aa11.51□□□□□ -0.57
SUPT20H-220ENST00000490716 FAM155AB1AL88 458 aaPredicted RBP11.51□□□□□ -0.57
SUPT20H-220ENST00000490716 IL15P40933 162 aaPredicted RBP11.51□□□□□ -0.57
SUPT20H-220ENST00000490716 LPIN2Q92539 896 aa11.51□□□□□ -0.57
SUPT20H-220ENST00000490716 C6orf229H3BNL8 230 aa11.51□□□□□ -0.57
SUPT20H-220ENST00000490716 MYOZ2Q9NPC6 264 aa11.51□□□□□ -0.57
SUPT20H-220ENST00000490716 PCDHAC2Q9Y5I4 1007 aa11.51□□□□□ -0.57
SUPT20H-220ENST00000490716 FMR1Q06787 632 aaKnown RBP eCLIP11.5□□□□□ -0.57
SUPT20H-220ENST00000490716 SUGT1Q9Y2Z0 365 aa11.5□□□□□ -0.57
SUPT20H-220ENST00000490716 RPAP1Q9BWH6 1393 aaPredicted RBP11.5□□□□□ -0.57
SUPT20H-220ENST00000490716 WNT10BO00744 389 aa11.5□□□□□ -0.57
SUPT20H-220ENST00000490716 SALL3Q9BXA9 1300 aa11.5□□□□□ -0.57
SUPT20H-220ENST00000490716 MYH1P12882 1939 aa11.5□□□□□ -0.57
SUPT20H-220ENST00000490716 GYG1P46976 350 aa11.5□□□□□ -0.57
SUPT20H-220ENST00000490716 SAMD7Q7Z3H4 446 aa11.5□□□□□ -0.57
SUPT20H-220ENST00000490716 CNTROBQ8N137 903 aa11.5□□□□□ -0.57
SUPT20H-220ENST00000490716 HDLBPQ00341 1268 aaKnown RBP11.49□□□□□ -0.57
SUPT20H-220ENST00000490716 TEPSINQ96N21 525 aa11.49□□□□□ -0.57
SUPT20H-220ENST00000490716 TLL2Q9Y6L7 1015 aa11.49□□□□□ -0.57
SUPT20H-220ENST00000490716 MAP3K11Q16584 847 aa11.49□□□□□ -0.57
SUPT20H-220ENST00000490716 GAKO14976 1311 aa11.49□□□□□ -0.57
SUPT20H-220ENST00000490716 BRCA2P51587 3418 aa11.49□□□□□ -0.57
SUPT20H-220ENST00000490716 ADORA1P30542 326 aa11.48□□□□□ -0.57
SUPT20H-220ENST00000490716 BCAMP50895 628 aa11.48□□□□□ -0.57
SUPT20H-220ENST00000490716 KLRG1Q96E93 195 aa11.48□□□□□ -0.57
SUPT20H-220ENST00000490716 SERPINA10Q9UK55 444 aa11.48□□□□□ -0.57
SUPT20H-220ENST00000490716 SEMA3EO15041 775 aa11.48□□□□□ -0.57
SUPT20H-220ENST00000490716 FAM163AQ96GL9 167 aaPredicted RBP11.48□□□□□ -0.57
SUPT20H-220ENST00000490716 PLIN1O60240 522 aa11.48□□□□□ -0.57
SUPT20H-220ENST00000490716 TFCP2Q12800 502 aa11.48□□□□□ -0.57
SUPT20H-220ENST00000490716 RBBP6Q7Z6E9 1792 aaKnown RBP11.48□□□□□ -0.57
SUPT20H-220ENST00000490716 SPDYE2BA6NHP3 402 aa11.47□□□□□ -0.57
SUPT20H-220ENST00000490716 SPDYE6P0CI01 402 aa11.47□□□□□ -0.57
SUPT20H-220ENST00000490716 HIBADHP31937 336 aaKnown RBP11.47□□□□□ -0.57
SUPT20H-220ENST00000490716 MAP3K10Q02779 954 aa11.47□□□□□ -0.57
SUPT20H-220ENST00000490716 TTLL5Q6EMB2 1281 aa11.47□□□□□ -0.57
SUPT20H-220ENST00000490716 ZNF804AQ7Z570 1209 aa11.47□□□□□ -0.57
SUPT20H-220ENST00000490716 CLUAP1Q96AJ1 413 aa11.47□□□□□ -0.57
SUPT20H-220ENST00000490716 USP17L8P0C7I0 530 aa11.47□□□□□ -0.57
SUPT20H-220ENST00000490716 KIF4BQ2VIQ3 1234 aa11.47□□□□□ -0.57
SUPT20H-220ENST00000490716 NBPF9Q3BBW0 867 aa11.47□□□□□ -0.57
SUPT20H-220ENST00000490716 DLK2Q6UY11 383 aa11.47□□□□□ -0.57
SUPT20H-220ENST00000490716 RLFQ13129 1914 aa11.47□□□□□ -0.57
SUPT20H-220ENST00000490716 TRAF5O00463 557 aa11.47□□□□□ -0.57
SUPT20H-220ENST00000490716 SRGAP3O43295 1099 aa11.47□□□□□ -0.57
SUPT20H-220ENST00000490716 APOBEC3HQ6NTF7 200 aaKnown RBP11.47□□□□□ -0.57
SUPT20H-220ENST00000490716 GJA3Q9Y6H8 435 aa11.47□□□□□ -0.57
SUPT20H-220ENST00000490716 LAMA4Q16363 1823 aa11.46□□□□□ -0.57
SUPT20H-220ENST00000490716 SCARF1Q14162 830 aa11.46□□□□□ -0.57
SUPT20H-220ENST00000490716 MAP1SQ66K74 1059 aaPredicted RBP11.46□□□□□ -0.57
SUPT20H-220ENST00000490716 ZDHHC15Q96MV8 337 aa11.46□□□□□ -0.57
SUPT20H-220ENST00000490716 CNNM1Q9NRU3 951 aa11.46□□□□□ -0.57
SUPT20H-220ENST00000490716 HDAC5Q9UQL6 1122 aa11.46□□□□□ -0.57
SUPT20H-220ENST00000490716 IGSF3O75054 1194 aa11.46□□□□□ -0.57
SUPT20H-220ENST00000490716 RRP1P56182 461 aaKnown RBP11.46□□□□□ -0.57
SUPT20H-220ENST00000490716 SAPCD2Q86UD0 394 aa11.46□□□□□ -0.57
SUPT20H-220ENST00000490716 PHKA1P46020 1223 aa11.46□□□□□ -0.58
SUPT20H-220ENST00000490716 SPDYE2Q495Y8 402 aa11.46□□□□□ -0.58
SUPT20H-220ENST00000490716 FRAT1Q92837 279 aaPredicted RBP11.46□□□□□ -0.58
SUPT20H-220ENST00000490716 A0A0G2JMZ2 1700 aa11.45□□□□□ -0.58
SUPT20H-220ENST00000490716 RASGRF1Q13972 1273 aa11.45□□□□□ -0.58
SUPT20H-220ENST00000490716 CCDC102BQ68D86 513 aa11.45□□□□□ -0.58
SUPT20H-220ENST00000490716 DDX19BQ9UMR2 479 aa11.45□□□□□ -0.58
SUPT20H-220ENST00000490716 AK9Q5TCS8 1911 aa11.45□□□□□ -0.58
SUPT20H-220ENST00000490716 GTF2IP78347 998 aa11.45□□□□□ -0.58
SUPT20H-220ENST00000490716 HTRA3P83110 453 aa11.45□□□□□ -0.58
SUPT20H-220ENST00000490716 TNNI3KQ59H18 835 aa11.45□□□□□ -0.58
SUPT20H-220ENST00000490716 METTL24Q5JXM2 366 aa11.45□□□□□ -0.58
SUPT20H-220ENST00000490716 HHIPL2Q6UWX4 724 aa11.45□□□□□ -0.58
SUPT20H-220ENST00000490716 RPAP2Q8IXW5 612 aaPredicted RBP11.45□□□□□ -0.58
SUPT20H-220ENST00000490716 FPGT-TNNI3KV9GXZ4 949 aa11.45□□□□□ -0.58
SUPT20H-220ENST00000490716 CENPFP49454 3210 aa11.44□□□□□ -0.58
SUPT20H-220ENST00000490716 A0A1B0GUL7 405 aa11.44□□□□□ -0.58
SUPT20H-220ENST00000490716 PRMT6Q96LA8 375 aaPredicted RBP11.44□□□□□ -0.58
SUPT20H-220ENST00000490716 GLIS2Q9BZE0 524 aaPredicted RBP11.44□□□□□ -0.58
SUPT20H-220ENST00000490716 TMX4Q9H1E5 349 aaPredicted RBP11.44□□□□□ -0.58
SUPT20H-220ENST00000490716 C1orf115Q9H7X2 142 aa11.44□□□□□ -0.58
SUPT20H-220ENST00000490716 DBNLQ9UJU6 430 aaKnown RBP11.44□□□□□ -0.58
SUPT20H-220ENST00000490716 TMEM88BA6NKF7 163 aa11.44□□□□□ -0.58
SUPT20H-220ENST00000490716 MCAMP43121 646 aa11.44□□□□□ -0.58
SUPT20H-220ENST00000490716 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.44□□□□□ -0.58
SUPT20H-220ENST00000490716 EAF2Q96CJ1 260 aaPredicted RBP11.44□□□□□ -0.58
SUPT20H-220ENST00000490716 XAGE2Q96GT9 111 aa11.44□□□□□ -0.58
SUPT20H-220ENST00000490716 MGAMO43451 1857 aa11.44□□□□□ -0.58
SUPT20H-220ENST00000490716 LDLRAD1Q5T700 205 aa11.44□□□□□ -0.58
SUPT20H-220ENST00000490716 FKBP1CQ5VVH2 108 aa11.44□□□□□ -0.58
SUPT20H-220ENST00000490716 TLR7Q9NYK1 1049 aaKnown RBP11.44□□□□□ -0.58
SUPT20H-220ENST00000490716 ATP2B3Q16720 1220 aa11.43□□□□□ -0.58
SUPT20H-220ENST00000490716 TBC1D10BQ4KMP7 808 aaPredicted RBP11.43□□□□□ -0.58
SUPT20H-220ENST00000490716 PCDHB15Q9Y5E8 787 aa11.43□□□□□ -0.58
SUPT20H-220ENST00000490716 PLXNB2O15031 1838 aa11.43□□□□□ -0.58
SUPT20H-220ENST00000490716 TNRC18O15417 2968 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms