RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 ZNF280AP59817 542 aaPredicted RBP4.1□□□□□ -1.75
UBXN4-208ENST00000490163 DGKZQ13574 1117 aa4.1□□□□□ -1.75
UBXN4-208ENST00000490163 LAMC2Q13753 1193 aa4.1□□□□□ -1.75
UBXN4-208ENST00000490163 RAVER1Q8IY67 606 aaKnown RBP4.1□□□□□ -1.75
UBXN4-208ENST00000490163 ANKK1Q8NFD2 765 aa4.1□□□□□ -1.75
UBXN4-208ENST00000490163 SPON2Q9BUD6 331 aa4.1□□□□□ -1.75
UBXN4-208ENST00000490163 STRN4Q9NRL3 753 aa4.1□□□□□ -1.75
UBXN4-208ENST00000490163 PRR12Q9ULL5 1215 aa4.1□□□□□ -1.75
UBXN4-208ENST00000490163 NR3C2P08235 984 aa4.1□□□□□ -1.75
UBXN4-208ENST00000490163 TXLNAP40222 546 aa4.1□□□□□ -1.75
UBXN4-208ENST00000490163 CRKP46108 304 aa4.1□□□□□ -1.75
UBXN4-208ENST00000490163 LIG3P49916 1009 aa4.1□□□□□ -1.75
UBXN4-208ENST00000490163 OR13H1Q8NG92 308 aa4.1□□□□□ -1.75
UBXN4-208ENST00000490163 L3MBTL2Q969R5 705 aa4.1□□□□□ -1.75
UBXN4-208ENST00000490163 KCNH8Q96L42 1107 aa4.1□□□□□ -1.75
UBXN4-208ENST00000490163 SLC26A8Q96RN1 970 aa4.1□□□□□ -1.75
UBXN4-208ENST00000490163 ZIC5Q96T25 663 aa4.1□□□□□ -1.75
UBXN4-208ENST00000490163 FANCLQ9NW38 375 aa4.1□□□□□ -1.75
UBXN4-208ENST00000490163 PLD2O14939 933 aa4.1□□□□□ -1.75
UBXN4-208ENST00000490163 STAU1O95793 577 aaKnown RBP4.1□□□□□ -1.75
UBXN4-208ENST00000490163 TMEM201Q5SNT2 666 aa4.1□□□□□ -1.75
UBXN4-208ENST00000490163 TMEM240Q5SV17 173 aa4.1□□□□□ -1.75
UBXN4-208ENST00000490163 LSRQ86X29 649 aaPredicted RBP4.1□□□□□ -1.75
UBXN4-208ENST00000490163 RHBDD1Q8TEB9 315 aa4.1□□□□□ -1.75
UBXN4-208ENST00000490163 MRPL4Q9BYD3 311 aaKnown RBP4.1□□□□□ -1.75
UBXN4-208ENST00000490163 TMPRSS4Q9NRS4 437 aa4.1□□□□□ -1.75
UBXN4-208ENST00000490163 GJD2Q9UKL4 321 aa4.1□□□□□ -1.75
UBXN4-208ENST00000490163 ATP8A1Q9Y2Q0 1164 aa4.1□□□□□ -1.75
UBXN4-208ENST00000490163 LEMD3Q9Y2U8 911 aa4.1□□□□□ -1.75
UBXN4-208ENST00000490163 GFRA2O00451 464 aa4.09□□□□□ -1.75
UBXN4-208ENST00000490163 PPP1R12AO14974 1030 aaPredicted RBP4.09□□□□□ -1.75
UBXN4-208ENST00000490163 DGKGP49619 791 aa4.09□□□□□ -1.75
UBXN4-208ENST00000490163 VARS2Q5ST30 1063 aaKnown RBP4.09□□□□□ -1.75
UBXN4-208ENST00000490163 CCAR1Q8IX12 1150 aaKnown RBP4.09□□□□□ -1.75
UBXN4-208ENST00000490163 CACTIN-AS1Q8N1I8 211 aa4.09□□□□□ -1.75
UBXN4-208ENST00000490163 DDX1Q92499 740 aaKnown RBP4.09□□□□□ -1.75
UBXN4-208ENST00000490163 MTRQ99707 1265 aa4.09□□□□□ -1.75
UBXN4-208ENST00000490163 PHACTR1Q9C0D0 580 aa4.09□□□□□ -1.75
UBXN4-208ENST00000490163 PEG3Q9GZU2 1588 aa4.09□□□□□ -1.75
UBXN4-208ENST00000490163 COL17A1Q9UMD9 1497 aaPredicted RBP4.09□□□□□ -1.75
UBXN4-208ENST00000490163 ANAPC15P60006 121 aa4.09□□□□□ -1.76
UBXN4-208ENST00000490163 RING1Q06587 406 aa4.09□□□□□ -1.76
UBXN4-208ENST00000490163 GBX1Q14549 363 aa4.09□□□□□ -1.76
UBXN4-208ENST00000490163 GSX2Q9BZM3 304 aa4.09□□□□□ -1.76
UBXN4-208ENST00000490163 CDH19Q9H159 772 aa4.09□□□□□ -1.76
UBXN4-208ENST00000490163 ANKIB1Q9P2G1 1089 aa4.09□□□□□ -1.76
UBXN4-208ENST00000490163 CD2APQ9Y5K6 639 aa4.09□□□□□ -1.76
UBXN4-208ENST00000490163 ANO9A1A5B4 782 aa4.08□□□□□ -1.76
UBXN4-208ENST00000490163 SMAD7O15105 426 aaKnown RBP4.08□□□□□ -1.76
UBXN4-208ENST00000490163 ARSDP51689 593 aa4.08□□□□□ -1.76
UBXN4-208ENST00000490163 CAMK2GQ13555 558 aaPredicted RBP4.08□□□□□ -1.76
UBXN4-208ENST00000490163 TCEA2Q15560 299 aa4.08□□□□□ -1.76
UBXN4-208ENST00000490163 RASIP1Q5U651 963 aa4.08□□□□□ -1.76
UBXN4-208ENST00000490163 KLHL6Q8WZ60 621 aa4.08□□□□□ -1.76
UBXN4-208ENST00000490163 SRRTQ9BXP5 876 aaKnown RBP4.08□□□□□ -1.76
UBXN4-208ENST00000490163 GNL3LQ9NVN8 582 aaKnown RBP4.08□□□□□ -1.76
UBXN4-208ENST00000490163 PTPN22Q9Y2R2 807 aa4.08□□□□□ -1.76
UBXN4-208ENST00000490163 BCAMP50895 628 aa4.08□□□□□ -1.76
UBXN4-208ENST00000490163 PURAQ00577 322 aaKnown RBP4.08□□□□□ -1.76
UBXN4-208ENST00000490163 PPP1R26Q5T8A7 1209 aaPredicted RBP4.08□□□□□ -1.76
UBXN4-208ENST00000490163 CDCP2Q5VXM1 449 aa4.08□□□□□ -1.76
UBXN4-208ENST00000490163 MRM1Q6IN84 353 aaKnown RBP4.08□□□□□ -1.76
UBXN4-208ENST00000490163 PDZD3Q86UT5 571 aa4.08□□□□□ -1.76
UBXN4-208ENST00000490163 PSMD1Q99460 953 aa4.08□□□□□ -1.76
UBXN4-208ENST00000490163 SOX17Q9H6I2 414 aaPredicted RBP4.08□□□□□ -1.76
UBXN4-208ENST00000490163 CAAP1Q9H8G2 361 aa4.08□□□□□ -1.76
UBXN4-208ENST00000490163 WBP1LQ9NX94 342 aa4.08□□□□□ -1.76
UBXN4-208ENST00000490163 CREB3O43889 395 aa4.08□□□□□ -1.76
UBXN4-208ENST00000490163 HRGP04196 525 aa4.08□□□□□ -1.76
UBXN4-208ENST00000490163 THBS1P07996 1170 aa4.08□□□□□ -1.76
UBXN4-208ENST00000490163 GALEQ14376 348 aa4.08□□□□□ -1.76
UBXN4-208ENST00000490163 NLRP13Q86W25 1043 aa4.08□□□□□ -1.76
UBXN4-208ENST00000490163 MFSD3Q96ES6 412 aa4.08□□□□□ -1.76
UBXN4-208ENST00000490163 TRIM56Q9BRZ2 755 aaKnown RBP4.08□□□□□ -1.76
UBXN4-208ENST00000490163 JADE2Q9NQC1 790 aa4.08□□□□□ -1.76
UBXN4-208ENST00000490163 HOMER2Q9NSB8 354 aa4.08□□□□□ -1.76
UBXN4-208ENST00000490163 SUSD2Q9UGT4 822 aa4.08□□□□□ -1.76
UBXN4-208ENST00000490163 A0A087WZG4 1122 aa4.07□□□□□ -1.76
UBXN4-208ENST00000490163 A0A1W2PQH9 124 aa4.07□□□□□ -1.76
UBXN4-208ENST00000490163 TLL1O43897 1013 aa4.07□□□□□ -1.76
UBXN4-208ENST00000490163 CAND2O75155 1236 aa4.07□□□□□ -1.76
UBXN4-208ENST00000490163 JAMLQ86YT9 394 aa4.07□□□□□ -1.76
UBXN4-208ENST00000490163 NKX2-3Q8TAU0 364 aa4.07□□□□□ -1.76
UBXN4-208ENST00000490163 GAL3ST3Q96A11 431 aa4.07□□□□□ -1.76
UBXN4-208ENST00000490163 VWCEQ96DN2 955 aa4.07□□□□□ -1.76
UBXN4-208ENST00000490163 TM9SF2Q99805 663 aa4.07□□□□□ -1.76
UBXN4-208ENST00000490163 ADAM19Q9H013 955 aa4.07□□□□□ -1.76
UBXN4-208ENST00000490163 PTCH2Q9Y6C5 1203 aa4.07□□□□□ -1.76
UBXN4-208ENST00000490163 NBPF10Q6P3W6 841 aaKnown RBP4.07□□□□□ -1.76
UBXN4-208ENST00000490163 NXPE4Q6UWF7 544 aa4.07□□□□□ -1.76
UBXN4-208ENST00000490163 RELL1Q8IUW5 271 aa4.07□□□□□ -1.76
UBXN4-208ENST00000490163 CBARPQ8N350 705 aaPredicted RBP4.07□□□□□ -1.76
UBXN4-208ENST00000490163 TTC9Q92623 222 aa4.07□□□□□ -1.76
UBXN4-208ENST00000490163 NRSN2Q9GZP1 204 aa4.07□□□□□ -1.76
UBXN4-208ENST00000490163 EFR3BQ9Y2G0 817 aa4.07□□□□□ -1.76
UBXN4-208ENST00000490163 SCRIBQ14160 1630 aa4.07□□□□□ -1.76
UBXN4-208ENST00000490163 C6orf222P0C671 652 aaPredicted RBP4.06□□□□□ -1.76
UBXN4-208ENST00000490163 PHKG2P15735 406 aa4.06□□□□□ -1.76
UBXN4-208ENST00000490163 MAP7Q14244 749 aa4.06□□□□□ -1.76
UBXN4-208ENST00000490163 BTLAQ7Z6A9 289 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms