RNA–Protein interactions for RNA: ENST00000490111.1

RTN1-207, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-207ENST00000490111 RNF135Q8IUD6 432 aa5.74□□□□□ -1.49
RTN1-207ENST00000490111 REM2Q8IYK8 340 aaPredicted RBP5.74□□□□□ -1.49
RTN1-207ENST00000490111 TMEM87AQ8NBN3 555 aa5.74□□□□□ -1.49
RTN1-207ENST00000490111 TTC13Q8NBP0 860 aa5.74□□□□□ -1.49
RTN1-207ENST00000490111 TMC1Q8TDI8 760 aa5.74□□□□□ -1.49
RTN1-207ENST00000490111 SPOCK3Q9BQ16 436 aa5.74□□□□□ -1.49
RTN1-207ENST00000490111 RBM42Q9BTD8 480 aaKnown RBP5.74□□□□□ -1.49
RTN1-207ENST00000490111 TMEM106CQ9BVX2 250 aa5.74□□□□□ -1.49
RTN1-207ENST00000490111 SLC12A5Q9H2X9 1139 aa5.74□□□□□ -1.49
RTN1-207ENST00000490111 RNF186Q9NXI6 227 aa5.74□□□□□ -1.49
RTN1-207ENST00000490111 MRPL42Q9Y6G3 142 aaKnown RBP5.74□□□□□ -1.49
RTN1-207ENST00000490111 ROCK2O75116 1388 aaKnown RBP5.74□□□□□ -1.49
RTN1-207ENST00000490111 KDRP35968 1356 aa5.74□□□□□ -1.49
RTN1-207ENST00000490111 AFDNP55196 1824 aaKnown RBP5.74□□□□□ -1.49
RTN1-207ENST00000490111 ZPR1O75312 459 aa5.73□□□□□ -1.49
RTN1-207ENST00000490111 CELF2O95319 508 aaKnown RBP5.73□□□□□ -1.49
RTN1-207ENST00000490111 DNAJA1P31689 397 aaKnown RBP5.73□□□□□ -1.49
RTN1-207ENST00000490111 TNNI2P48788 182 aa5.73□□□□□ -1.49
RTN1-207ENST00000490111 ARHGAP4P98171 946 aa5.73□□□□□ -1.49
RTN1-207ENST00000490111 BMS1Q14692 1282 aaKnown RBP5.73□□□□□ -1.49
RTN1-207ENST00000490111 NFIXQ14938 502 aa5.73□□□□□ -1.49
RTN1-207ENST00000490111 USPL1Q5W0Q7 1092 aa5.73□□□□□ -1.49
RTN1-207ENST00000490111 TAS1R3Q7RTX0 852 aa5.73□□□□□ -1.49
RTN1-207ENST00000490111 ANKMY2Q8IV38 441 aa5.73□□□□□ -1.49
RTN1-207ENST00000490111 CCDC146Q8IYE0 955 aa5.73□□□□□ -1.49
RTN1-207ENST00000490111 GPC2Q8N158 579 aa5.73□□□□□ -1.49
RTN1-207ENST00000490111 MPNDQ8N594 471 aa5.73□□□□□ -1.49
RTN1-207ENST00000490111 STAG1Q8WVM7 1258 aa5.73□□□□□ -1.49
RTN1-207ENST00000490111 RNF34Q969K3 372 aa5.73□□□□□ -1.49
RTN1-207ENST00000490111 COL25A1Q9BXS0 654 aaPredicted RBP5.73□□□□□ -1.49
RTN1-207ENST00000490111 ANO2Q9NQ90 1003 aa5.73□□□□□ -1.49
RTN1-207ENST00000490111 IFT57Q9NWB7 429 aa5.73□□□□□ -1.49
RTN1-207ENST00000490111 PDZRN3Q9UPQ7 1066 aa5.73□□□□□ -1.49
RTN1-207ENST00000490111 NRXN2Q9P2S2 1712 aa5.73□□□□□ -1.49
RTN1-207ENST00000490111 SKIP12755 728 aa5.72□□□□□ -1.49
RTN1-207ENST00000490111 PTMSP20962 102 aa5.72□□□□□ -1.49
RTN1-207ENST00000490111 PDE6BP35913 854 aa5.72□□□□□ -1.49
RTN1-207ENST00000490111 TBX4P57082 545 aa5.72□□□□□ -1.49
RTN1-207ENST00000490111 GNL2Q13823 731 aaKnown RBP5.72□□□□□ -1.49
RTN1-207ENST00000490111 LONRF3Q496Y0 759 aa5.72□□□□□ -1.49
RTN1-207ENST00000490111 C4orf46Q504U0 113 aa5.72□□□□□ -1.49
RTN1-207ENST00000490111 FILIP1Q7Z7B0 1213 aa5.72□□□□□ -1.49
RTN1-207ENST00000490111 CCAR1Q8IX12 1150 aaKnown RBP5.72□□□□□ -1.49
RTN1-207ENST00000490111 SYNE4Q8N205 404 aa5.72□□□□□ -1.49
RTN1-207ENST00000490111 GPATCH11Q8N954 259 aa5.72□□□□□ -1.49
RTN1-207ENST00000490111 OTUD5Q96G74 571 aa5.72□□□□□ -1.49
RTN1-207ENST00000490111 DDX56Q9NY93 547 aaKnown RBP5.72□□□□□ -1.49
RTN1-207ENST00000490111 HDAC9Q9UKV0 1011 aa5.72□□□□□ -1.49
RTN1-207ENST00000490111 CARMIL3Q8ND23 1372 aa5.71□□□□□ -1.5
RTN1-207ENST00000490111 FZD9O00144 591 aa5.71□□□□□ -1.5
RTN1-207ENST00000490111 ENPP3O14638 875 aa5.71□□□□□ -1.5
RTN1-207ENST00000490111 RASA1P20936 1047 aa5.71□□□□□ -1.5
RTN1-207ENST00000490111 CRKLP46109 303 aaKnown RBP5.71□□□□□ -1.5
RTN1-207ENST00000490111 RHBDL3P58872 404 aa5.71□□□□□ -1.5
RTN1-207ENST00000490111 KIF23Q02241 960 aaPredicted RBP5.71□□□□□ -1.5
RTN1-207ENST00000490111 FBXO46Q6PJ61 603 aaPredicted RBP5.71□□□□□ -1.5
RTN1-207ENST00000490111 USP50Q70EL3 339 aaPredicted RBP5.71□□□□□ -1.5
RTN1-207ENST00000490111 DEPDC4Q8N2C3 294 aa5.71□□□□□ -1.5
RTN1-207ENST00000490111 PNMA1Q8ND90 353 aa5.71□□□□□ -1.5
RTN1-207ENST00000490111 FAM174AQ8TBP5 190 aa5.71□□□□□ -1.5
RTN1-207ENST00000490111 CNKSR1Q969H4 720 aa5.71□□□□□ -1.5
RTN1-207ENST00000490111 MAF1Q9H063 256 aa5.71□□□□□ -1.5
RTN1-207ENST00000490111 PRR12Q9ULL5 1215 aa5.71□□□□□ -1.5
RTN1-207ENST00000490111 SPG7Q9UQ90 795 aa5.71□□□□□ -1.5
RTN1-207ENST00000490111 SCN11AQ9UI33 1791 aa5.7□□□□□ -1.5
RTN1-207ENST00000490111 A0A1W2PP64 1363 aa5.7□□□□□ -1.5
RTN1-207ENST00000490111 MYH14Q7Z406 1995 aaKnown RBP5.7□□□□□ -1.5
RTN1-207ENST00000490111 POTEFA5A3E0 1075 aa5.7□□□□□ -1.5
RTN1-207ENST00000490111 FAM155AB1AL88 458 aaPredicted RBP5.7□□□□□ -1.5
RTN1-207ENST00000490111 S100BP04271 92 aaPredicted RBP5.7□□□□□ -1.5
RTN1-207ENST00000490111 XRCC5P13010 732 aaKnown RBP5.7□□□□□ -1.5
RTN1-207ENST00000490111 PAX3P23760 479 aa5.7□□□□□ -1.5
RTN1-207ENST00000490111 ZNF76P36508 570 aa5.7□□□□□ -1.5
RTN1-207ENST00000490111 EPS15P42566 896 aa5.7□□□□□ -1.5
RTN1-207ENST00000490111 ARID5AQ03989 594 aa5.7□□□□□ -1.5
RTN1-207ENST00000490111 OCLNQ16625 522 aa5.7□□□□□ -1.5
RTN1-207ENST00000490111 TSHZ1Q6ZSZ6 1077 aa5.7□□□□□ -1.5
RTN1-207ENST00000490111 HELBQ8NG08 1087 aaPredicted RBP5.7□□□□□ -1.5
RTN1-207ENST00000490111 BRIP1Q9BX63 1249 aa5.7□□□□□ -1.5
RTN1-207ENST00000490111 ZNF408Q9H9D4 720 aa5.7□□□□□ -1.5
RTN1-207ENST00000490111 PRDM6Q9NQX0 595 aa5.7□□□□□ -1.5
RTN1-207ENST00000490111 ZNF277Q9NRM2 450 aaPredicted RBP5.7□□□□□ -1.5
RTN1-207ENST00000490111 CXXC1Q9P0U4 656 aaPredicted RBP5.7□□□□□ -1.5
RTN1-207ENST00000490111 G3BP2Q9UN86 482 aaKnown RBP5.7□□□□□ -1.5
RTN1-207ENST00000490111 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.7□□□□□ -1.5
RTN1-207ENST00000490111 ATP5J2-PTCD1G3V325 749 aa5.69□□□□□ -1.5
RTN1-207ENST00000490111 H0YGN5 161 aa5.69□□□□□ -1.5
RTN1-207ENST00000490111 PITPNM1O00562 1244 aa5.69□□□□□ -1.5
RTN1-207ENST00000490111 HOXA2O43364 376 aa5.69□□□□□ -1.5
RTN1-207ENST00000490111 SH3BP5O60239 455 aa5.69□□□□□ -1.5
RTN1-207ENST00000490111 DNAJC6O75061 913 aa5.69□□□□□ -1.5
RTN1-207ENST00000490111 HUNKP57058 714 aa5.69□□□□□ -1.5
RTN1-207ENST00000490111 FKBP4Q02790 459 aaKnown RBP eCLIP5.69□□□□□ -1.5
RTN1-207ENST00000490111 NR1H3Q13133 447 aa5.69□□□□□ -1.5
RTN1-207ENST00000490111 RRS1Q15050 365 aaKnown RBP5.69□□□□□ -1.5
RTN1-207ENST00000490111 CCDC93Q567U6 631 aa5.69□□□□□ -1.5
RTN1-207ENST00000490111 INTS3Q68E01 1043 aaKnown RBP5.69□□□□□ -1.5
RTN1-207ENST00000490111 STYK1Q6J9G0 422 aa5.69□□□□□ -1.5
RTN1-207ENST00000490111 RGMBQ6NW40 437 aa5.69□□□□□ -1.5
RTN1-207ENST00000490111 PRPF40BQ6NWY9 871 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms