RNA–Protein interactions for RNA: ENST00000489695.1

HOXA9-205, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-205ENST00000489695 MYH16Q9H6N6 1097 aa28.47■■■□□ 2.15
HOXA9-205ENST00000489695 PPP1R12BO60237 982 aaPredicted RBP28.46■■■□□ 2.15
HOXA9-205ENST00000489695 FLIIQ13045 1269 aa28.46■■■□□ 2.15
HOXA9-205ENST00000489695 WNK4Q96J92 1243 aa28.46■■■□□ 2.15
HOXA9-205ENST00000489695 CLMNQ96JQ2 1002 aa28.46■■■□□ 2.15
HOXA9-205ENST00000489695 SNAP23O00161 211 aa28.45■■■□□ 2.14
HOXA9-205ENST00000489695 LINS1Q8NG48 757 aa28.45■■■□□ 2.14
HOXA9-205ENST00000489695 PCDHAC2Q9Y5I4 1007 aa28.45■■■□□ 2.14
HOXA9-205ENST00000489695 ANKRD18BA2A2Z9 1011 aa28.44■■■□□ 2.14
HOXA9-205ENST00000489695 IGF2BP3O00425 579 aaKnown RBP eCLIP28.44■■■□□ 2.14
HOXA9-205ENST00000489695 IL1R1P14778 569 aa28.44■■■□□ 2.14
HOXA9-205ENST00000489695 FKBP1AP62942 108 aaKnown RBP28.44■■■□□ 2.14
HOXA9-205ENST00000489695 OTOP1Q7RTM1 612 aa28.44■■■□□ 2.14
HOXA9-205ENST00000489695 DNAAF4Q8WXU2 420 aa28.44■■■□□ 2.14
HOXA9-205ENST00000489695 TRIM17Q9Y577 477 aa28.44■■■□□ 2.14
HOXA9-205ENST00000489695 SPDYE2BA6NHP3 402 aa28.43■■■□□ 2.14
HOXA9-205ENST00000489695 TAF5LO75529 589 aa28.43■■■□□ 2.14
HOXA9-205ENST00000489695 SPDYE6P0CI01 402 aa28.43■■■□□ 2.14
HOXA9-205ENST00000489695 SUPT20HL1Q3ZLR7 823 aa28.43■■■□□ 2.14
HOXA9-205ENST00000489695 INTS3Q68E01 1043 aaKnown RBP28.43■■■□□ 2.14
HOXA9-205ENST00000489695 WWC1Q8IX03 1113 aa28.43■■■□□ 2.14
HOXA9-205ENST00000489695 BRCA2P51587 3418 aa28.43■■■□□ 2.14
HOXA9-205ENST00000489695 LAMB1P07942 1786 aa28.42■■■□□ 2.14
HOXA9-205ENST00000489695 ZNF316A6NFI3 1004 aaPredicted RBP28.42■■■□□ 2.14
HOXA9-205ENST00000489695 MYO1BO43795 1136 aa28.42■■■□□ 2.14
HOXA9-205ENST00000489695 CFAP100Q494V2 611 aa28.42■■■□□ 2.14
HOXA9-205ENST00000489695 PRMT6Q96LA8 375 aaPredicted RBP28.42■■■□□ 2.14
HOXA9-205ENST00000489695 FKBP5Q13451 457 aaPredicted RBP28.41■■■□□ 2.14
HOXA9-205ENST00000489695 HELBQ8NG08 1087 aaPredicted RBP28.41■■■□□ 2.14
HOXA9-205ENST00000489695 CLRN2A0PK11 232 aa28.4■■■□□ 2.14
HOXA9-205ENST00000489695 FOXO4P98177 505 aa28.4■■■□□ 2.14
HOXA9-205ENST00000489695 NBPF12Q5TAG4 269 aaPredicted RBP28.4■■■□□ 2.14
HOXA9-205ENST00000489695 ZNF804AQ7Z570 1209 aa28.4■■■□□ 2.14
HOXA9-205ENST00000489695 GCC1Q96CN9 775 aa28.4■■■□□ 2.14
HOXA9-205ENST00000489695 IL16Q14005 1332 aa28.4■■■□□ 2.14
HOXA9-205ENST00000489695 F8W031 263 aaPredicted RBP28.39■■■□□ 2.14
HOXA9-205ENST00000489695 IFIT5Q13325 482 aaKnown RBP28.39■■■□□ 2.14
HOXA9-205ENST00000489695 AOX1Q06278 1338 aa28.39■■■□□ 2.13
HOXA9-205ENST00000489695 ECM29Q5VYK3 1845 aa28.39■■■□□ 2.13
HOXA9-205ENST00000489695 USP2O75604 605 aaPredicted RBP28.38■■■□□ 2.13
HOXA9-205ENST00000489695 GJA5P36382 358 aa28.38■■■□□ 2.13
HOXA9-205ENST00000489695 IREB2P48200 963 aaKnown RBP28.38■■■□□ 2.13
HOXA9-205ENST00000489695 CCDC184Q52MB2 194 aa28.38■■■□□ 2.13
HOXA9-205ENST00000489695 ERO1AQ96HE7 468 aa28.38■■■□□ 2.13
HOXA9-205ENST00000489695 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.38■■■□□ 2.13
HOXA9-205ENST00000489695 TESPA1A2RU30 521 aaPredicted RBP28.37■■■□□ 2.13
HOXA9-205ENST00000489695 POTEFA5A3E0 1075 aa28.37■■■□□ 2.13
HOXA9-205ENST00000489695 OTUD7BQ6GQQ9 843 aa28.37■■■□□ 2.13
HOXA9-205ENST00000489695 VEZTQ9HBM0 779 aa28.37■■■□□ 2.13
HOXA9-205ENST00000489695 PTPN22Q9Y2R2 807 aa28.37■■■□□ 2.13
HOXA9-205ENST00000489695 CRHR2Q13324 411 aa28.36■■■□□ 2.13
HOXA9-205ENST00000489695 RASA3Q14644 834 aa28.36■■■□□ 2.13
HOXA9-205ENST00000489695 ANKRD13AQ8IZ07 590 aa28.36■■■□□ 2.13
HOXA9-205ENST00000489695 PTPN18Q99952 460 aa28.36■■■□□ 2.13
HOXA9-205ENST00000489695 NCBP3Q53F19 620 aaKnown RBP28.35■■■□□ 2.13
HOXA9-205ENST00000489695 CD99L2Q8TCZ2 262 aa28.34■■■□□ 2.13
HOXA9-205ENST00000489695 ARMC5Q96C12 935 aa28.34■■■□□ 2.13
HOXA9-205ENST00000489695 A0A1B0GUL6 1792 aa28.34■■■□□ 2.13
HOXA9-205ENST00000489695 JAG2Q9Y219 1238 aa28.33■■■□□ 2.13
HOXA9-205ENST00000489695 FAM205AQ6ZU69 1335 aa28.33■■■□□ 2.13
HOXA9-205ENST00000489695 VAMP4O75379 141 aa28.32■■■□□ 2.12
HOXA9-205ENST00000489695 RBM5P52756 815 aaKnown RBP eCLIP28.32■■■□□ 2.12
HOXA9-205ENST00000489695 BEND3Q5T5X7 828 aa28.32■■■□□ 2.12
HOXA9-205ENST00000489695 EFCC1Q9HA90 598 aa28.32■■■□□ 2.12
HOXA9-205ENST00000489695 CHMP3Q9Y3E7 222 aa28.32■■■□□ 2.12
HOXA9-205ENST00000489695 SP3Q02447 781 aa28.31■■■□□ 2.12
HOXA9-205ENST00000489695 SPDYE2Q495Y8 402 aa28.31■■■□□ 2.12
HOXA9-205ENST00000489695 LMBR1LQ6UX01 489 aa28.31■■■□□ 2.12
HOXA9-205ENST00000489695 LDHAL6AQ6ZMR3 332 aa28.31■■■□□ 2.12
HOXA9-205ENST00000489695 FANCIQ9NVI1 1328 aa28.31■■■□□ 2.12
HOXA9-205ENST00000489695 CAP1Q01518 475 aa28.3■■■□□ 2.12
HOXA9-205ENST00000489695 TNFAIP1Q13829 316 aa28.3■■■□□ 2.12
HOXA9-205ENST00000489695 HABP4Q5JVS0 413 aaKnown RBP28.3■■■□□ 2.12
HOXA9-205ENST00000489695 EPHA10Q5JZY3 1008 aa28.3■■■□□ 2.12
HOXA9-205ENST00000489695 MS4A4AQ96JQ5 239 aa28.3■■■□□ 2.12
HOXA9-205ENST00000489695 SERPINA10Q9UK55 444 aa28.3■■■□□ 2.12
HOXA9-205ENST00000489695 RBBP6Q7Z6E9 1792 aaKnown RBP28.29■■■□□ 2.12
HOXA9-205ENST00000489695 CCDC57Q2TAC2 916 aa28.29■■■□□ 2.12
HOXA9-205ENST00000489695 TDRD7Q8NHU6 1098 aaKnown RBP28.29■■■□□ 2.12
HOXA9-205ENST00000489695 OPTNQ96CV9 577 aa28.29■■■□□ 2.12
HOXA9-205ENST00000489695 ZNF594Q96JF6 807 aaPredicted RBP28.29■■■□□ 2.12
HOXA9-205ENST00000489695 ZNF70Q9UC06 446 aaPredicted RBP28.29■■■□□ 2.12
HOXA9-205ENST00000489695 CACNA1FO60840 1977 aa28.28■■■□□ 2.12
HOXA9-205ENST00000489695 F6X3S4 739 aa28.28■■■□□ 2.12
HOXA9-205ENST00000489695 PLIN1O60240 522 aa28.28■■■□□ 2.12
HOXA9-205ENST00000489695 MFSD14BQ5SR56 506 aa28.28■■■□□ 2.12
HOXA9-205ENST00000489695 TEPSINQ96N21 525 aa28.28■■■□□ 2.12
HOXA9-205ENST00000489695 ELP3Q9H9T3 547 aa28.28■■■□□ 2.12
HOXA9-205ENST00000489695 ANP32CO43423 234 aa28.27■■■□□ 2.12
HOXA9-205ENST00000489695 CNNM1Q9NRU3 951 aa28.27■■■□□ 2.12
HOXA9-205ENST00000489695 EN2P19622 333 aaPredicted RBP28.26■■■□□ 2.11
HOXA9-205ENST00000489695 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.26■■■□□ 2.11
HOXA9-205ENST00000489695 TDRD3Q9H7E2 651 aaKnown RBP28.26■■■□□ 2.11
HOXA9-205ENST00000489695 TTF2Q9UNY4 1162 aaKnown RBP28.26■■■□□ 2.11
HOXA9-205ENST00000489695 GRM8O00222 908 aa28.25■■■□□ 2.11
HOXA9-205ENST00000489695 UBE4AQ14139 1066 aa28.25■■■□□ 2.11
HOXA9-205ENST00000489695 TAF7LQ5H9L4 462 aa28.25■■■□□ 2.11
HOXA9-205ENST00000489695 OTOFQ9HC10 1997 aa28.24■■■□□ 2.11
HOXA9-205ENST00000489695 HIBADHP31937 336 aaKnown RBP28.24■■■□□ 2.11
HOXA9-205ENST00000489695 CDAN1Q8IWY9 1227 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms