RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 PUS3Q9BZE2 481 aaKnown RBP11.63□□□□□ -0.55
NOD1-208ENST00000489614 DBNLQ9UJU6 430 aaKnown RBP11.63□□□□□ -0.55
NOD1-208ENST00000489614 PNPLA7Q6ZV29 1317 aa11.63□□□□□ -0.55
NOD1-208ENST00000489614 PLCB2Q00722 1185 aa11.63□□□□□ -0.55
NOD1-208ENST00000489614 ERFEQ4G0M1 354 aa11.63□□□□□ -0.55
NOD1-208ENST00000489614 CTNNA3Q9UI47 895 aa11.63□□□□□ -0.55
NOD1-208ENST00000489614 CHD4Q14839 1912 aa11.62□□□□□ -0.55
NOD1-208ENST00000489614 TRAPPC3LQ5T215 181 aa11.62□□□□□ -0.55
NOD1-208ENST00000489614 NUTM1Q86Y26 1132 aa11.62□□□□□ -0.55
NOD1-208ENST00000489614 ZNF594Q96JF6 807 aaPredicted RBP11.62□□□□□ -0.55
NOD1-208ENST00000489614 ZNF512BQ96KM6 892 aaPredicted RBP11.62□□□□□ -0.55
NOD1-208ENST00000489614 YY1AP1Q9H869 796 aa11.62□□□□□ -0.55
NOD1-208ENST00000489614 CDC45O75419 566 aa11.62□□□□□ -0.55
NOD1-208ENST00000489614 ITGA6P23229 1130 aa11.62□□□□□ -0.55
NOD1-208ENST00000489614 RAD51AP2Q09MP3 1159 aa11.62□□□□□ -0.55
NOD1-208ENST00000489614 G3BP1Q13283 466 aaKnown RBP eCLIP11.62□□□□□ -0.55
NOD1-208ENST00000489614 AXDND1Q5T1B0 1012 aaPredicted RBP11.62□□□□□ -0.55
NOD1-208ENST00000489614 TSPYL1Q9H0U9 437 aa11.62□□□□□ -0.55
NOD1-208ENST00000489614 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.61□□□□□ -0.55
NOD1-208ENST00000489614 ZNF330Q9Y3S2 320 aaPredicted RBP11.61□□□□□ -0.55
NOD1-208ENST00000489614 SNED1Q8TER0 1413 aa11.61□□□□□ -0.55
NOD1-208ENST00000489614 ATP5JP18859 108 aa11.61□□□□□ -0.55
NOD1-208ENST00000489614 NFIXQ14938 502 aa11.61□□□□□ -0.55
NOD1-208ENST00000489614 CRY2Q49AN0 593 aa11.61□□□□□ -0.55
NOD1-208ENST00000489614 CT47A1Q5JQC4 288 aaPredicted RBP11.61□□□□□ -0.55
NOD1-208ENST00000489614 NYXQ9GZU5 481 aa11.61□□□□□ -0.55
NOD1-208ENST00000489614 EFCC1Q9HA90 598 aa11.61□□□□□ -0.55
NOD1-208ENST00000489614 ECHDC1Q9NTX5 307 aa11.61□□□□□ -0.55
NOD1-208ENST00000489614 DDX41Q9UJV9 622 aaKnown RBP11.61□□□□□ -0.55
NOD1-208ENST00000489614 DDX60LQ5H9U9 1706 aaKnown RBP11.61□□□□□ -0.55
NOD1-208ENST00000489614 EPB41L2O43491 1005 aaKnown RBP11.61□□□□□ -0.55
NOD1-208ENST00000489614 TPRNQ4KMQ1 711 aa11.61□□□□□ -0.55
NOD1-208ENST00000489614 FOXD4L5Q5VV16 416 aaPredicted RBP11.61□□□□□ -0.55
NOD1-208ENST00000489614 CLASRPQ8N2M8 674 aaKnown RBP11.61□□□□□ -0.55
NOD1-208ENST00000489614 FOXD4L4Q8WXT5 416 aaPredicted RBP11.61□□□□□ -0.55
NOD1-208ENST00000489614 KIF2CQ99661 725 aa11.61□□□□□ -0.55
NOD1-208ENST00000489614 DIAPH3Q9NSV4 1193 aa11.61□□□□□ -0.55
NOD1-208ENST00000489614 POLRMTO00411 1230 aaKnown RBP11.6□□□□□ -0.55
NOD1-208ENST00000489614 NCBP1Q09161 790 aaKnown RBP11.6□□□□□ -0.55
NOD1-208ENST00000489614 TSHZ3Q63HK5 1081 aa11.6□□□□□ -0.55
NOD1-208ENST00000489614 C10orf67Q8IYJ2 551 aa11.6□□□□□ -0.55
NOD1-208ENST00000489614 LAMB1P07942 1786 aa11.6□□□□□ -0.55
NOD1-208ENST00000489614 DHX16O60231 1041 aaKnown RBP11.6□□□□□ -0.55
NOD1-208ENST00000489614 DDR1Q08345 913 aa11.6□□□□□ -0.55
NOD1-208ENST00000489614 LMBRD1Q9NUN5 540 aa11.6□□□□□ -0.55
NOD1-208ENST00000489614 GLRX3O76003 335 aaKnown RBP11.59□□□□□ -0.55
NOD1-208ENST00000489614 GPT2Q8TD30 523 aa11.59□□□□□ -0.55
NOD1-208ENST00000489614 SIL1Q9H173 461 aa11.59□□□□□ -0.55
NOD1-208ENST00000489614 TMEM63CQ9P1W3 806 aa11.59□□□□□ -0.55
NOD1-208ENST00000489614 TIAM2Q8IVF5 1701 aa11.59□□□□□ -0.55
NOD1-208ENST00000489614 MROH5Q6ZUA9 1318 aa11.59□□□□□ -0.55
NOD1-208ENST00000489614 APBB1O00213 710 aa11.59□□□□□ -0.55
NOD1-208ENST00000489614 APBA3O96018 575 aa11.59□□□□□ -0.55
NOD1-208ENST00000489614 HCLS1P14317 486 aaPredicted RBP11.59□□□□□ -0.55
NOD1-208ENST00000489614 CHMLP26374 656 aa11.59□□□□□ -0.55
NOD1-208ENST00000489614 IFIT5Q13325 482 aaKnown RBP11.59□□□□□ -0.55
NOD1-208ENST00000489614 LRSAM1Q6UWE0 723 aa11.59□□□□□ -0.55
NOD1-208ENST00000489614 AACSQ86V21 672 aa11.59□□□□□ -0.55
NOD1-208ENST00000489614 COL23A1Q86Y22 540 aaPredicted RBP11.59□□□□□ -0.55
NOD1-208ENST00000489614 NSFL1CQ9UNZ2 370 aaKnown RBP11.59□□□□□ -0.55
NOD1-208ENST00000489614 MED23Q9ULK4 1368 aa11.59□□□□□ -0.55
NOD1-208ENST00000489614 ANKRD18BA2A2Z9 1011 aa11.58□□□□□ -0.55
NOD1-208ENST00000489614 HSP90B1P14625 803 aaKnown RBP11.58□□□□□ -0.55
NOD1-208ENST00000489614 PKP1Q13835 747 aa11.58□□□□□ -0.55
NOD1-208ENST00000489614 CCDC57Q2TAC2 916 aa11.58□□□□□ -0.55
NOD1-208ENST00000489614 KRT222Q8N1A0 295 aa11.58□□□□□ -0.55
NOD1-208ENST00000489614 HAUS7Q99871 368 aa11.58□□□□□ -0.55
NOD1-208ENST00000489614 IL25Q9H293 177 aa11.58□□□□□ -0.55
NOD1-208ENST00000489614 TRIM66O15016 1216 aa11.58□□□□□ -0.56
NOD1-208ENST00000489614 ZPR1O75312 459 aa11.58□□□□□ -0.56
NOD1-208ENST00000489614 FAM43BQ6ZT52 329 aaPredicted RBP11.58□□□□□ -0.56
NOD1-208ENST00000489614 USP25Q9UHP3 1055 aa11.58□□□□□ -0.56
NOD1-208ENST00000489614 COL1A1P02452 1464 aaPredicted RBP11.58□□□□□ -0.56
NOD1-208ENST00000489614 NOP2P46087 812 aaKnown RBP11.58□□□□□ -0.56
NOD1-208ENST00000489614 MYCBPQ99417 103 aaPredicted RBP11.58□□□□□ -0.56
NOD1-208ENST00000489614 ECM29Q5VYK3 1845 aa11.58□□□□□ -0.56
NOD1-208ENST00000489614 SLX4Q8IY92 1834 aa11.58□□□□□ -0.56
NOD1-208ENST00000489614 RFC4P35249 363 aa11.57□□□□□ -0.56
NOD1-208ENST00000489614 CCDC152Q4G0S7 254 aa11.57□□□□□ -0.56
NOD1-208ENST00000489614 PRR5LQ6MZQ0 368 aa11.57□□□□□ -0.56
NOD1-208ENST00000489614 CNKSR2Q8WXI2 1034 aa11.57□□□□□ -0.56
NOD1-208ENST00000489614 DBNDD2Q9BQY9 259 aa11.57□□□□□ -0.56
NOD1-208ENST00000489614 RASSF4Q9H2L5 321 aa11.57□□□□□ -0.56
NOD1-208ENST00000489614 SEC31BQ9NQW1 1179 aa11.57□□□□□ -0.56
NOD1-208ENST00000489614 ARID4AP29374 1257 aaPredicted RBP11.57□□□□□ -0.56
NOD1-208ENST00000489614 KIF18AQ8NI77 898 aa11.57□□□□□ -0.56
NOD1-208ENST00000489614 SETDB2Q96T68 719 aa11.57□□□□□ -0.56
NOD1-208ENST00000489614 ZNF804BA4D1E1 1349 aa11.57□□□□□ -0.56
NOD1-208ENST00000489614 PDE8BO95263 885 aa11.56□□□□□ -0.56
NOD1-208ENST00000489614 HOMEZQ8IX15 550 aa11.56□□□□□ -0.56
NOD1-208ENST00000489614 FLAD1Q8NFF5 587 aa11.56□□□□□ -0.56
NOD1-208ENST00000489614 ESYT1Q9BSJ8 1104 aa11.56□□□□□ -0.56
NOD1-208ENST00000489614 CCDC8Q9H0W5 538 aaPredicted RBP11.56□□□□□ -0.56
NOD1-208ENST00000489614 MORC2Q9Y6X9 1032 aaPredicted RBP11.56□□□□□ -0.56
NOD1-208ENST00000489614 A0A1B0GUL7 405 aa11.56□□□□□ -0.56
NOD1-208ENST00000489614 KCNB2Q92953 911 aa11.56□□□□□ -0.56
NOD1-208ENST00000489614 USP26Q9BXU7 913 aa11.56□□□□□ -0.56
NOD1-208ENST00000489614 BSDC1Q9NW68 430 aaPredicted RBP11.56□□□□□ -0.56
NOD1-208ENST00000489614 C10orf71Q711Q0 1435 aa11.56□□□□□ -0.56
NOD1-208ENST00000489614 ERC2O15083 957 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms