RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 STK3Q13188 491 aa17.62■□□□□ 0.41
COL9A1-208ENST00000489611 WASHC4Q2M389 1173 aa17.62■□□□□ 0.41
COL9A1-208ENST00000489611 IFFO2Q5TF58 517 aa17.62■□□□□ 0.41
COL9A1-208ENST00000489611 VGLL2Q8N8G2 317 aa17.62■□□□□ 0.41
COL9A1-208ENST00000489611 CCDC39Q9UFE4 941 aa17.62■□□□□ 0.41
COL9A1-208ENST00000489611 CCNL1Q9UK58 526 aaPredicted RBP17.62■□□□□ 0.41
COL9A1-208ENST00000489611 GOLGA6L4A6NEF3 574 aa17.62■□□□□ 0.41
COL9A1-208ENST00000489611 TRIM37O94972 964 aa17.62■□□□□ 0.41
COL9A1-208ENST00000489611 GPTP24298 496 aa17.62■□□□□ 0.41
COL9A1-208ENST00000489611 ADORA1P30542 326 aa17.62■□□□□ 0.41
COL9A1-208ENST00000489611 BRWD3Q6RI45 1802 aa17.62■□□□□ 0.41
COL9A1-208ENST00000489611 M0R2C6 588 aa17.61■□□□□ 0.41
COL9A1-208ENST00000489611 SCRN1Q12765 414 aa17.61■□□□□ 0.41
COL9A1-208ENST00000489611 COL9A3Q14050 684 aaPredicted RBP17.61■□□□□ 0.41
COL9A1-208ENST00000489611 UBE3CQ15386 1083 aa17.61■□□□□ 0.41
COL9A1-208ENST00000489611 PUM3Q15397 648 aaKnown RBP17.61■□□□□ 0.41
COL9A1-208ENST00000489611 SMIM5Q71RC9 77 aa17.61■□□□□ 0.41
COL9A1-208ENST00000489611 LPIN2Q92539 896 aa17.61■□□□□ 0.41
COL9A1-208ENST00000489611 SPATA32Q96LK8 384 aa17.61■□□□□ 0.41
COL9A1-208ENST00000489611 RTL9Q8NET4 1388 aa17.61■□□□□ 0.41
COL9A1-208ENST00000489611 CHGBP05060 677 aa17.6■□□□□ 0.41
COL9A1-208ENST00000489611 ARID4AP29374 1257 aaPredicted RBP17.6■□□□□ 0.41
COL9A1-208ENST00000489611 ZAP70P43403 619 aa17.6■□□□□ 0.41
COL9A1-208ENST00000489611 POTEAQ6S8J7 498 aa17.6■□□□□ 0.41
COL9A1-208ENST00000489611 NOL7Q9UMY1 257 aaKnown RBP17.6■□□□□ 0.41
COL9A1-208ENST00000489611 LAMB2P55268 1798 aa17.6■□□□□ 0.41
COL9A1-208ENST00000489611 EP400Q96L91 3159 aa17.6■□□□□ 0.41
COL9A1-208ENST00000489611 SBF2Q86WG5 1849 aa17.6■□□□□ 0.41
COL9A1-208ENST00000489611 RGL2O15211 777 aa17.6■□□□□ 0.41
COL9A1-208ENST00000489611 TTC6Q86TZ1 520 aa17.6■□□□□ 0.41
COL9A1-208ENST00000489611 DDX19AQ9NUU7 478 aaKnown RBP17.6■□□□□ 0.41
COL9A1-208ENST00000489611 NSUN7Q8NE18 718 aaKnown RBP17.59■□□□□ 0.41
COL9A1-208ENST00000489611 NCOA7Q8NI08 942 aa17.59■□□□□ 0.41
COL9A1-208ENST00000489611 MYH15Q9Y2K3 1946 aa17.59■□□□□ 0.41
COL9A1-208ENST00000489611 MYH14Q7Z406 1995 aaKnown RBP17.59■□□□□ 0.41
COL9A1-208ENST00000489611 ZNF213O14771 459 aa17.59■□□□□ 0.41
COL9A1-208ENST00000489611 CCDC192P0DO97 292 aa17.59■□□□□ 0.41
COL9A1-208ENST00000489611 ADD2P35612 726 aa17.59■□□□□ 0.41
COL9A1-208ENST00000489611 RESTQ13127 1097 aa17.59■□□□□ 0.41
COL9A1-208ENST00000489611 ZMYM6O95789 1325 aa17.58■□□□□ 0.41
COL9A1-208ENST00000489611 DDX60Q8IY21 1712 aaKnown RBP17.58■□□□□ 0.4
COL9A1-208ENST00000489611 FGAP02671 866 aa17.58■□□□□ 0.4
COL9A1-208ENST00000489611 SLC5A1P13866 664 aa17.58■□□□□ 0.4
COL9A1-208ENST00000489611 PDIA3P30101 505 aaKnown RBP17.58■□□□□ 0.4
COL9A1-208ENST00000489611 MCAMP43121 646 aa17.58■□□□□ 0.4
COL9A1-208ENST00000489611 RALYLQ86SE5 291 aaKnown RBP17.58■□□□□ 0.4
COL9A1-208ENST00000489611 FERMT3Q86UX7 667 aa17.58■□□□□ 0.4
COL9A1-208ENST00000489611 LEO1Q8WVC0 666 aaPredicted RBP17.58■□□□□ 0.4
COL9A1-208ENST00000489611 CCDC85AQ96PX6 553 aaPredicted RBP17.58■□□□□ 0.4
COL9A1-208ENST00000489611 UTP14AQ9BVJ6 771 aaKnown RBP17.58■□□□□ 0.4
COL9A1-208ENST00000489611 UBN2Q6ZU65 1347 aa17.58■□□□□ 0.4
COL9A1-208ENST00000489611 CNTNAP4Q9C0A0 1308 aa17.58■□□□□ 0.4
COL9A1-208ENST00000489611 SALL1Q9NSC2 1324 aa17.58■□□□□ 0.4
COL9A1-208ENST00000489611 GPAA1O43292 621 aa17.57■□□□□ 0.4
COL9A1-208ENST00000489611 SCARF1Q14162 830 aa17.57■□□□□ 0.4
COL9A1-208ENST00000489611 FUCA2Q9BTY2 467 aa17.57■□□□□ 0.4
COL9A1-208ENST00000489611 ZNF652Q9Y2D9 606 aa17.57■□□□□ 0.4
COL9A1-208ENST00000489611 COL5A3P25940 1745 aaPredicted RBP17.57■□□□□ 0.4
COL9A1-208ENST00000489611 PTPDC1A2A3K4 754 aa17.57■□□□□ 0.4
COL9A1-208ENST00000489611 JAK2O60674 1132 aa17.57■□□□□ 0.4
COL9A1-208ENST00000489611 CAMTA2O94983 1202 aa17.57■□□□□ 0.4
COL9A1-208ENST00000489611 FGFR2P21802 821 aa17.57■□□□□ 0.4
COL9A1-208ENST00000489611 APOBRQ0VD83 1088 aa17.57■□□□□ 0.4
COL9A1-208ENST00000489611 TRDNQ13061 729 aa17.57■□□□□ 0.4
COL9A1-208ENST00000489611 CCDC152Q4G0S7 254 aa17.57■□□□□ 0.4
COL9A1-208ENST00000489611 RNF214Q8ND24 703 aa17.57■□□□□ 0.4
COL9A1-208ENST00000489611 ZNF396Q96N95 335 aaPredicted RBP17.57■□□□□ 0.4
COL9A1-208ENST00000489611 NUP62CLQ9H1M0 184 aa17.57■□□□□ 0.4
COL9A1-208ENST00000489611 LRRC4BQ9NT99 713 aa17.57■□□□□ 0.4
COL9A1-208ENST00000489611 CAVIN2O95810 425 aa17.56■□□□□ 0.4
COL9A1-208ENST00000489611 MAP3K11Q16584 847 aa17.56■□□□□ 0.4
COL9A1-208ENST00000489611 SLC9C2Q5TAH2 1124 aa17.56■□□□□ 0.4
COL9A1-208ENST00000489611 CCDC102BQ68D86 513 aa17.56■□□□□ 0.4
COL9A1-208ENST00000489611 SYNE4Q8N205 404 aa17.56■□□□□ 0.4
COL9A1-208ENST00000489611 MPHOSPH8Q99549 860 aa17.56■□□□□ 0.4
COL9A1-208ENST00000489611 AMIGO3Q86WK7 504 aa17.55■□□□□ 0.4
COL9A1-208ENST00000489611 PUS7LQ9H0K6 701 aaKnown RBP17.55■□□□□ 0.4
COL9A1-208ENST00000489611 DOCK2Q92608 1830 aa17.55■□□□□ 0.4
COL9A1-208ENST00000489611 GNPATO15228 680 aa17.55■□□□□ 0.4
COL9A1-208ENST00000489611 FOXP2O15409 715 aa17.55■□□□□ 0.4
COL9A1-208ENST00000489611 ZNF500O60304 480 aaPredicted RBP17.55■□□□□ 0.4
COL9A1-208ENST00000489611 ALX1Q15699 326 aa17.55■□□□□ 0.4
COL9A1-208ENST00000489611 SLFNL1Q499Z3 407 aa17.55■□□□□ 0.4
COL9A1-208ENST00000489611 RC3H1Q5TC82 1133 aaKnown RBP17.55■□□□□ 0.4
COL9A1-208ENST00000489611 CLEC4GQ6UXB4 293 aa17.55■□□□□ 0.4
COL9A1-208ENST00000489611 MB21D2Q8IYB1 491 aaPredicted RBP17.55■□□□□ 0.4
COL9A1-208ENST00000489611 LRRC2Q9BYS8 371 aa17.55■□□□□ 0.4
COL9A1-208ENST00000489611 ZKSCAN5Q9Y2L8 839 aa17.55■□□□□ 0.4
COL9A1-208ENST00000489611 PRC1O43663 620 aa17.53■□□□□ 0.4
COL9A1-208ENST00000489611 RPS6KA4O75676 772 aa17.53■□□□□ 0.4
COL9A1-208ENST00000489611 CTDNEP1O95476 244 aa17.53■□□□□ 0.4
COL9A1-208ENST00000489611 MAP3K12Q12852 859 aa17.53■□□□□ 0.4
COL9A1-208ENST00000489611 SUSD4Q5VX71 490 aa17.53■□□□□ 0.4
COL9A1-208ENST00000489611 RBM43Q6ZSC3 357 aaKnown RBP17.53■□□□□ 0.4
COL9A1-208ENST00000489611 BCORQ6W2J9 1755 aa17.53■□□□□ 0.4
COL9A1-208ENST00000489611 LY75O60449 1722 aa17.53■□□□□ 0.4
COL9A1-208ENST00000489611 IGHMBP2P38935 993 aaKnown RBP17.53■□□□□ 0.4
COL9A1-208ENST00000489611 TTLL5Q6EMB2 1281 aa17.53■□□□□ 0.4
COL9A1-208ENST00000489611 DDX11Q96FC9 970 aa17.53■□□□□ 0.4
COL9A1-208ENST00000489611 TNMDQ9H2S6 317 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms