RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 PGAP2Q9UHJ9 254 aa19.53■□□□□ 0.72
LMX1A-204ENST00000489443 DDX19BQ9UMR2 479 aa19.53■□□□□ 0.72
LMX1A-204ENST00000489443 TFCP2Q12800 502 aa19.52■□□□□ 0.72
LMX1A-204ENST00000489443 POLA2Q14181 598 aa19.52■□□□□ 0.72
LMX1A-204ENST00000489443 PDE3AQ14432 1141 aa19.52■□□□□ 0.72
LMX1A-204ENST00000489443 CERS5Q8N5B7 392 aa19.52■□□□□ 0.72
LMX1A-204ENST00000489443 SSH3Q8TE77 659 aa19.52■□□□□ 0.72
LMX1A-204ENST00000489443 F8W031 263 aaPredicted RBP19.51■□□□□ 0.71
LMX1A-204ENST00000489443 TRAF5O00463 557 aa19.51■□□□□ 0.71
LMX1A-204ENST00000489443 FMR1Q06787 632 aaKnown RBP eCLIP19.51■□□□□ 0.71
LMX1A-204ENST00000489443 CHAF1AQ13111 956 aaPredicted RBP19.51■□□□□ 0.71
LMX1A-204ENST00000489443 GLIS2Q9BZE0 524 aaPredicted RBP19.51■□□□□ 0.71
LMX1A-204ENST00000489443 HDAC9Q9UKV0 1011 aa19.51■□□□□ 0.71
LMX1A-204ENST00000489443 FAM205AQ6ZU69 1335 aa19.51■□□□□ 0.71
LMX1A-204ENST00000489443 OS9Q13438 667 aaPredicted RBP19.5■□□□□ 0.71
LMX1A-204ENST00000489443 SCARF1Q14162 830 aa19.5■□□□□ 0.71
LMX1A-204ENST00000489443 CEP85Q6P2H3 762 aa19.5■□□□□ 0.71
LMX1A-204ENST00000489443 USP48Q86UV5 1035 aa19.5■□□□□ 0.71
LMX1A-204ENST00000489443 DCPSQ96C86 337 aaKnown RBP19.5■□□□□ 0.71
LMX1A-204ENST00000489443 ASTN2O75129 1339 aaPredicted RBP19.5■□□□□ 0.71
LMX1A-204ENST00000489443 SURF6O75683 361 aaKnown RBP19.49■□□□□ 0.71
LMX1A-204ENST00000489443 TIMM10P62072 90 aa19.49■□□□□ 0.71
LMX1A-204ENST00000489443 FKBP1AP62942 108 aaKnown RBP19.49■□□□□ 0.71
LMX1A-204ENST00000489443 MFSD14BQ5SR56 506 aa19.49■□□□□ 0.71
LMX1A-204ENST00000489443 CDC37L1Q7L3B6 337 aa19.49■□□□□ 0.71
LMX1A-204ENST00000489443 CHMP4BQ9H444 224 aaKnown RBP19.49■□□□□ 0.71
LMX1A-204ENST00000489443 ZBTB40Q9NUA8 1239 aa19.49■□□□□ 0.71
LMX1A-204ENST00000489443 AKAP2Q9Y2D5 859 aa19.49■□□□□ 0.71
LMX1A-204ENST00000489443 TMEM88BA6NKF7 163 aa19.48■□□□□ 0.71
LMX1A-204ENST00000489443 ADORA1P30542 326 aa19.48■□□□□ 0.71
LMX1A-204ENST00000489443 MMP14P50281 582 aa19.48■□□□□ 0.71
LMX1A-204ENST00000489443 NBPF9Q3BBW0 867 aa19.48■□□□□ 0.71
LMX1A-204ENST00000489443 KRT26Q7Z3Y9 468 aa19.48■□□□□ 0.71
LMX1A-204ENST00000489443 NEUROD6Q96NK8 337 aa19.48■□□□□ 0.71
LMX1A-204ENST00000489443 GGA3Q9NZ52 723 aa19.48■□□□□ 0.71
LMX1A-204ENST00000489443 A0A1B0GUL7 405 aa19.47■□□□□ 0.71
LMX1A-204ENST00000489443 ANGEL2Q5VTE6 544 aaKnown RBP19.47■□□□□ 0.71
LMX1A-204ENST00000489443 CREBZFQ9NS37 354 aa19.47■□□□□ 0.71
LMX1A-204ENST00000489443 GNL3LQ9NVN8 582 aaKnown RBP19.47■□□□□ 0.71
LMX1A-204ENST00000489443 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.47■□□□□ 0.71
LMX1A-204ENST00000489443 TRPM7Q96QT4 1865 aa19.46■□□□□ 0.71
LMX1A-204ENST00000489443 PHKA1P46020 1223 aa19.46■□□□□ 0.71
LMX1A-204ENST00000489443 DLK2Q6UY11 383 aa19.46■□□□□ 0.71
LMX1A-204ENST00000489443 DNAJC5GQ8N7S2 189 aa19.46■□□□□ 0.71
LMX1A-204ENST00000489443 MYH13Q9UKX3 1938 aa19.46■□□□□ 0.71
LMX1A-204ENST00000489443 ADM5C9JUS6 153 aa19.45■□□□□ 0.7
LMX1A-204ENST00000489443 WNT10BO00744 389 aa19.45■□□□□ 0.7
LMX1A-204ENST00000489443 DLGAP5Q15398 846 aa19.45■□□□□ 0.7
LMX1A-204ENST00000489443 SULF1Q8IWU6 871 aa19.45■□□□□ 0.7
LMX1A-204ENST00000489443 TBC1D22AQ8WUA7 517 aa19.45■□□□□ 0.7
LMX1A-204ENST00000489443 XAGE2Q96GT9 111 aa19.45■□□□□ 0.7
LMX1A-204ENST00000489443 ZNF408Q9H9D4 720 aa19.45■□□□□ 0.7
LMX1A-204ENST00000489443 TTF2Q9UNY4 1162 aaKnown RBP19.45■□□□□ 0.7
LMX1A-204ENST00000489443 CELF2O95319 508 aaKnown RBP19.44■□□□□ 0.7
LMX1A-204ENST00000489443 RBM5P52756 815 aaKnown RBP eCLIP19.44■□□□□ 0.7
LMX1A-204ENST00000489443 RRP1P56182 461 aaKnown RBP19.44■□□□□ 0.7
LMX1A-204ENST00000489443 GORABQ5T7V8 394 aa19.44■□□□□ 0.7
LMX1A-204ENST00000489443 CST9Q5W186 159 aa19.44■□□□□ 0.7
LMX1A-204ENST00000489443 CCDC102BQ68D86 513 aa19.44■□□□□ 0.7
LMX1A-204ENST00000489443 SCAF8Q9UPN6 1271 aaKnown RBP19.44■□□□□ 0.7
LMX1A-204ENST00000489443 NOP58Q9Y2X3 529 aaKnown RBP19.44■□□□□ 0.7
LMX1A-204ENST00000489443 ARAP2Q8WZ64 1704 aa19.43■□□□□ 0.7
LMX1A-204ENST00000489443 GRIK5Q16478 980 aa19.43■□□□□ 0.7
LMX1A-204ENST00000489443 CFAP100Q494V2 611 aa19.43■□□□□ 0.7
LMX1A-204ENST00000489443 RPAP2Q8IXW5 612 aaPredicted RBP19.43■□□□□ 0.7
LMX1A-204ENST00000489443 PCDHAC2Q9Y5I4 1007 aa19.43■□□□□ 0.7
LMX1A-204ENST00000489443 PCNTO95613 3336 aa19.42■□□□□ 0.7
LMX1A-204ENST00000489443 WDR66Q8TBY9 1149 aa19.42■□□□□ 0.7
LMX1A-204ENST00000489443 KLRG1Q96E93 195 aa19.42■□□□□ 0.7
LMX1A-204ENST00000489443 ZBED3Q96IU2 234 aaPredicted RBP19.42■□□□□ 0.7
LMX1A-204ENST00000489443 MKRN1Q9UHC7 482 aaKnown RBP19.42■□□□□ 0.7
LMX1A-204ENST00000489443 ABT1Q9ULW3 272 aaKnown RBP19.42■□□□□ 0.7
LMX1A-204ENST00000489443 EXOC6BQ9Y2D4 811 aa19.42■□□□□ 0.7
LMX1A-204ENST00000489443 HMMRO75330 724 aa19.41■□□□□ 0.7
LMX1A-204ENST00000489443 SIRT2Q8IXJ6 389 aa19.41■□□□□ 0.7
LMX1A-204ENST00000489443 MTMR14Q8NCE2 650 aa19.41■□□□□ 0.7
LMX1A-204ENST00000489443 PRMT6Q96LA8 375 aaPredicted RBP19.41■□□□□ 0.7
LMX1A-204ENST00000489443 DENND2AQ9ULE3 1009 aa19.41■□□□□ 0.7
LMX1A-204ENST00000489443 PITPNM2Q9BZ72 1349 aa19.41■□□□□ 0.7
LMX1A-204ENST00000489443 SPDYE2BA6NHP3 402 aa19.4■□□□□ 0.7
LMX1A-204ENST00000489443 SEMA3EO15041 775 aa19.4■□□□□ 0.7
LMX1A-204ENST00000489443 SPDYE6P0CI01 402 aa19.4■□□□□ 0.7
LMX1A-204ENST00000489443 TNNI3KQ59H18 835 aa19.4■□□□□ 0.7
LMX1A-204ENST00000489443 GPR108Q9NPR9 543 aa19.4■□□□□ 0.7
LMX1A-204ENST00000489443 SERPINA10Q9UK55 444 aa19.4■□□□□ 0.7
LMX1A-204ENST00000489443 FPGT-TNNI3KV9GXZ4 949 aa19.4■□□□□ 0.7
LMX1A-204ENST00000489443 COL1A1P02452 1464 aaPredicted RBP19.4■□□□□ 0.7
LMX1A-204ENST00000489443 MYO1BO43795 1136 aa19.39■□□□□ 0.69
LMX1A-204ENST00000489443 CRKP46108 304 aa19.39■□□□□ 0.69
LMX1A-204ENST00000489443 RASGRF1Q13972 1273 aa19.39■□□□□ 0.69
LMX1A-204ENST00000489443 CDCA5Q96FF9 252 aa19.39■□□□□ 0.69
LMX1A-204ENST00000489443 CLRN2A0PK11 232 aa19.38■□□□□ 0.69
LMX1A-204ENST00000489443 APBB1O00213 710 aa19.38■□□□□ 0.69
LMX1A-204ENST00000489443 HSP90AB4PQ58FF6 505 aa19.38■□□□□ 0.69
LMX1A-204ENST00000489443 PRAMEF18Q5VWM3 479 aa19.38■□□□□ 0.69
LMX1A-204ENST00000489443 ERC1Q8IUD2 1116 aa19.38■□□□□ 0.69
LMX1A-204ENST00000489443 SUGT1Q9Y2Z0 365 aa19.38■□□□□ 0.69
LMX1A-204ENST00000489443 AOX1Q06278 1338 aa19.37■□□□□ 0.69
LMX1A-204ENST00000489443 DEFB115Q30KQ5 88 aa19.37■□□□□ 0.69
LMX1A-204ENST00000489443 APOBEC3FQ8IUX4 373 aaKnown RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms