RNA–Protein interactions for RNA: ENST00000489421.1

SCMH1-216, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-216ENST00000489421 FOXJ1Q92949 421 aa9.09□□□□□ -0.95
SCMH1-216ENST00000489421 ATP13A2Q9NQ11 1180 aa9.09□□□□□ -0.95
SCMH1-216ENST00000489421 DICER1Q9UPY3 1922 aaKnown RBP9.08□□□□□ -0.96
SCMH1-216ENST00000489421 VARSP26640 1264 aaKnown RBP9.08□□□□□ -0.96
SCMH1-216ENST00000489421 CANXP27824 592 aaKnown RBP9.08□□□□□ -0.96
SCMH1-216ENST00000489421 SLC39A6Q13433 755 aa9.08□□□□□ -0.96
SCMH1-216ENST00000489421 AAMPQ13685 434 aa9.08□□□□□ -0.96
SCMH1-216ENST00000489421 SH3D19Q5HYK7 790 aa9.08□□□□□ -0.96
SCMH1-216ENST00000489421 DZIP1LQ8IYY4 767 aaKnown RBP9.08□□□□□ -0.96
SCMH1-216ENST00000489421 PANK1Q8TE04 598 aa9.08□□□□□ -0.96
SCMH1-216ENST00000489421 SMARCC1Q92922 1105 aaPredicted RBP9.08□□□□□ -0.96
SCMH1-216ENST00000489421 TNNQ9UQP3 1299 aa9.08□□□□□ -0.96
SCMH1-216ENST00000489421 ANKRD36CQ5JPF3 1778 aa9.07□□□□□ -0.96
SCMH1-216ENST00000489421 TCERG1O14776 1098 aaKnown RBP9.07□□□□□ -0.96
SCMH1-216ENST00000489421 SKIV2LQ15477 1246 aaKnown RBP9.07□□□□□ -0.96
SCMH1-216ENST00000489421 C4orf48Q5BLP8 95 aa9.07□□□□□ -0.96
SCMH1-216ENST00000489421 PROCA1Q8NCQ7 364 aaPredicted RBP9.07□□□□□ -0.96
SCMH1-216ENST00000489421 HELBQ8NG08 1087 aaPredicted RBP9.07□□□□□ -0.96
SCMH1-216ENST00000489421 ZNF496Q96IT1 587 aaPredicted RBP9.07□□□□□ -0.96
SCMH1-216ENST00000489421 API5Q9BZZ5 524 aaKnown RBP9.07□□□□□ -0.96
SCMH1-216ENST00000489421 PTPRCP08575 1304 aa9.06□□□□□ -0.96
SCMH1-216ENST00000489421 TIAM2Q8IVF5 1701 aa9.06□□□□□ -0.96
SCMH1-216ENST00000489421 MVPQ14764 893 aaKnown RBP9.06□□□□□ -0.96
SCMH1-216ENST00000489421 HDGFL1Q5TGJ6 251 aa9.06□□□□□ -0.96
SCMH1-216ENST00000489421 DDRGK1Q96HY6 314 aa9.06□□□□□ -0.96
SCMH1-216ENST00000489421 FMNL2Q96PY5 1086 aa9.06□□□□□ -0.96
SCMH1-216ENST00000489421 STK31Q9BXU1 1019 aa9.06□□□□□ -0.96
SCMH1-216ENST00000489421 COG6Q9Y2V7 657 aa9.06□□□□□ -0.96
SCMH1-216ENST00000489421 WASF2Q9Y6W5 498 aa9.06□□□□□ -0.96
SCMH1-216ENST00000489421 LAMB2P55268 1798 aa9.06□□□□□ -0.96
SCMH1-216ENST00000489421 FER1L6Q2WGJ9 1857 aa9.06□□□□□ -0.96
SCMH1-216ENST00000489421 ABCC4O15439 1325 aa9.05□□□□□ -0.96
SCMH1-216ENST00000489421 PXDNLA1KZ92 1463 aa9.05□□□□□ -0.96
SCMH1-216ENST00000489421 SNRPA1P09661 255 aaKnown RBP9.05□□□□□ -0.96
SCMH1-216ENST00000489421 YBX3P16989 372 aaKnown RBP eCLIP9.05□□□□□ -0.96
SCMH1-216ENST00000489421 SSFA2P28290 1259 aa9.05□□□□□ -0.96
SCMH1-216ENST00000489421 CTDSPL2Q05D32 466 aa9.05□□□□□ -0.96
SCMH1-216ENST00000489421 G2E3Q7L622 706 aa9.05□□□□□ -0.96
SCMH1-216ENST00000489421 FTSJ3Q8IY81 847 aaKnown RBP9.05□□□□□ -0.96
SCMH1-216ENST00000489421 TTC5Q8N0Z6 440 aa9.05□□□□□ -0.96
SCMH1-216ENST00000489421 MPNDQ8N594 471 aa9.05□□□□□ -0.96
SCMH1-216ENST00000489421 CLUAP1Q96AJ1 413 aa9.05□□□□□ -0.96
SCMH1-216ENST00000489421 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.05□□□□□ -0.96
SCMH1-216ENST00000489421 C10orf71Q711Q0 1435 aa9.05□□□□□ -0.96
SCMH1-216ENST00000489421 CNTNAP4Q9C0A0 1308 aa9.05□□□□□ -0.96
SCMH1-216ENST00000489421 PRAMEF22A3QJZ6 481 aa9.04□□□□□ -0.96
SCMH1-216ENST00000489421 PTCD1O75127 700 aaKnown RBP9.04□□□□□ -0.96
SCMH1-216ENST00000489421 EIF2S2P20042 333 aaKnown RBP9.04□□□□□ -0.96
SCMH1-216ENST00000489421 FLIIQ13045 1269 aa9.04□□□□□ -0.96
SCMH1-216ENST00000489421 INTS3Q68E01 1043 aaKnown RBP9.04□□□□□ -0.96
SCMH1-216ENST00000489421 TMEM57Q8N5G2 664 aa9.04□□□□□ -0.96
SCMH1-216ENST00000489421 DBF4Q9UBU7 674 aaPredicted RBP9.04□□□□□ -0.96
SCMH1-216ENST00000489421 TNRC6CQ9HCJ0 1690 aaKnown RBP9.04□□□□□ -0.96
SCMH1-216ENST00000489421 SNRPBP14678 240 aaKnown RBP9.03□□□□□ -0.96
SCMH1-216ENST00000489421 YY1P25490 414 aa9.03□□□□□ -0.96
SCMH1-216ENST00000489421 POLD1P28340 1107 aa9.03□□□□□ -0.96
SCMH1-216ENST00000489421 B4GALNT3Q6L9W6 998 aa9.03□□□□□ -0.96
SCMH1-216ENST00000489421 FAM174AQ8TBP5 190 aa9.03□□□□□ -0.96
SCMH1-216ENST00000489421 DDX21Q9NR30 783 aaKnown RBP eCLIP9.03□□□□□ -0.96
SCMH1-216ENST00000489421 CHPF2Q9P2E5 772 aa9.03□□□□□ -0.96
SCMH1-216ENST00000489421 DDX19BQ9UMR2 479 aa9.03□□□□□ -0.96
SCMH1-216ENST00000489421 SLX4Q8IY92 1834 aa9.03□□□□□ -0.96
SCMH1-216ENST00000489421 ZBTB7BO15156 539 aaPredicted RBP9.02□□□□□ -0.97
SCMH1-216ENST00000489421 BMP1P13497 986 aa9.02□□□□□ -0.97
SCMH1-216ENST00000489421 NNTQ13423 1086 aa9.02□□□□□ -0.97
SCMH1-216ENST00000489421 INTS5Q6P9B9 1019 aaKnown RBP9.02□□□□□ -0.97
SCMH1-216ENST00000489421 LRP10Q7Z4F1 713 aa9.02□□□□□ -0.97
SCMH1-216ENST00000489421 DNAJC10Q8IXB1 793 aa9.02□□□□□ -0.97
SCMH1-216ENST00000489421 LRRN4Q8WUT4 740 aa9.02□□□□□ -0.97
SCMH1-216ENST00000489421 CCDC136Q96JN2 1154 aa9.02□□□□□ -0.97
SCMH1-216ENST00000489421 TRIM47Q96LD4 638 aa9.02□□□□□ -0.97
SCMH1-216ENST00000489421 ZBTB40Q9NUA8 1239 aa9.02□□□□□ -0.97
SCMH1-216ENST00000489421 HYPKQ9NX55 129 aa9.02□□□□□ -0.97
SCMH1-216ENST00000489421 USP16Q9Y5T5 823 aa9.02□□□□□ -0.97
SCMH1-216ENST00000489421 TAF1P21675 1872 aa9.02□□□□□ -0.97
SCMH1-216ENST00000489421 ERBB4Q15303 1308 aa9.02□□□□□ -0.97
SCMH1-216ENST00000489421 CAPN5O15484 640 aaPredicted RBP9.01□□□□□ -0.97
SCMH1-216ENST00000489421 RPS6KA4O75676 772 aa9.01□□□□□ -0.97
SCMH1-216ENST00000489421 GYS1P13807 737 aa9.01□□□□□ -0.97
SCMH1-216ENST00000489421 CRKLP46109 303 aaKnown RBP9.01□□□□□ -0.97
SCMH1-216ENST00000489421 PROSER3Q2NL68 480 aa9.01□□□□□ -0.97
SCMH1-216ENST00000489421 PPP2R2DQ66LE6 453 aa9.01□□□□□ -0.97
SCMH1-216ENST00000489421 TRIM46Q7Z4K8 759 aa9.01□□□□□ -0.97
SCMH1-216ENST00000489421 SH3RF1Q7Z6J0 888 aa9.01□□□□□ -0.97
SCMH1-216ENST00000489421 ITPRIPQ8IWB1 547 aa9.01□□□□□ -0.97
SCMH1-216ENST00000489421 FLAD1Q8NFF5 587 aa9.01□□□□□ -0.97
SCMH1-216ENST00000489421 CDK15Q96Q40 435 aa9.01□□□□□ -0.97
SCMH1-216ENST00000489421 TEX13AQ9BXU3 409 aaPredicted RBP9.01□□□□□ -0.97
SCMH1-216ENST00000489421 CHMP4BQ9H444 224 aaKnown RBP9.01□□□□□ -0.97
SCMH1-216ENST00000489421 PHAXQ9H814 394 aaKnown RBP9.01□□□□□ -0.97
SCMH1-216ENST00000489421 SRP68Q9UHB9 627 aaKnown RBP9.01□□□□□ -0.97
SCMH1-216ENST00000489421 WWC3Q9ULE0 1092 aa9.01□□□□□ -0.97
SCMH1-216ENST00000489421 ADH1CP00326 375 aa9□□□□□ -0.97
SCMH1-216ENST00000489421 CCT4P50991 539 aaKnown RBP9□□□□□ -0.97
SCMH1-216ENST00000489421 FKBP5Q13451 457 aaPredicted RBP9□□□□□ -0.97
SCMH1-216ENST00000489421 AGERQ15109 404 aa9□□□□□ -0.97
SCMH1-216ENST00000489421 LCE2AQ5TA79 106 aaPredicted RBP9□□□□□ -0.97
SCMH1-216ENST00000489421 SH3BP5LQ7L8J4 393 aa9□□□□□ -0.97
SCMH1-216ENST00000489421 BPHLQ86WA6 291 aaPredicted RBP9□□□□□ -0.97
SCMH1-216ENST00000489421 ZBTB1Q9Y2K1 713 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms