RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 CNPY4Q8N129 248 aa21.56■■□□□ 1.04
POLR2J3-205ENST00000489144 SNX14Q9Y5W7 946 aa21.56■■□□□ 1.04
POLR2J3-205ENST00000489144 CCDC171Q6TFL3 1326 aa21.56■■□□□ 1.04
POLR2J3-205ENST00000489144 BCAMP50895 628 aa21.55■■□□□ 1.04
POLR2J3-205ENST00000489144 ANKRD18AQ8IVF6 992 aa21.55■■□□□ 1.04
POLR2J3-205ENST00000489144 NLRP3Q96P20 1036 aa21.55■■□□□ 1.04
POLR2J3-205ENST00000489144 K7ELQ4 463 aaPredicted RBP21.55■■□□□ 1.04
POLR2J3-205ENST00000489144 GABPB1Q06547 395 aaPredicted RBP21.55■■□□□ 1.04
POLR2J3-205ENST00000489144 ADCK5Q3MIX3 580 aa21.55■■□□□ 1.04
POLR2J3-205ENST00000489144 VPS53Q5VIR6 699 aa21.55■■□□□ 1.04
POLR2J3-205ENST00000489144 SNX21Q969T3 373 aa21.55■■□□□ 1.04
POLR2J3-205ENST00000489144 RBM8AQ9Y5S9 174 aaKnown RBP21.55■■□□□ 1.04
POLR2J3-205ENST00000489144 MROH5Q6ZUA9 1318 aa21.55■■□□□ 1.04
POLR2J3-205ENST00000489144 TULP2O00295 520 aa21.54■■□□□ 1.04
POLR2J3-205ENST00000489144 MSL1Q68DK7 614 aa21.54■■□□□ 1.04
POLR2J3-205ENST00000489144 TNPO1Q92973 898 aaKnown RBP21.54■■□□□ 1.04
POLR2J3-205ENST00000489144 NYXQ9GZU5 481 aa21.54■■□□□ 1.04
POLR2J3-205ENST00000489144 GEMIN8Q9NWZ8 242 aaKnown RBP21.54■■□□□ 1.04
POLR2J3-205ENST00000489144 PDCL2Q8N4E4 241 aa21.54■■□□□ 1.04
POLR2J3-205ENST00000489144 CNBD1Q8NA66 436 aa21.54■■□□□ 1.04
POLR2J3-205ENST00000489144 TSC1Q92574 1164 aa21.54■■□□□ 1.04
POLR2J3-205ENST00000489144 KLRK1P26718 216 aa21.53■■□□□ 1.04
POLR2J3-205ENST00000489144 CDC5LQ99459 802 aaKnown RBP21.53■■□□□ 1.04
POLR2J3-205ENST00000489144 TNRC6CQ9HCJ0 1690 aaKnown RBP21.53■■□□□ 1.04
POLR2J3-205ENST00000489144 LRP5O75197 1615 aa21.53■■□□□ 1.04
POLR2J3-205ENST00000489144 A0A0G2JLW4 131 aa21.53■■□□□ 1.04
POLR2J3-205ENST00000489144 FGFR2P21802 821 aa21.53■■□□□ 1.04
POLR2J3-205ENST00000489144 DDIT3P35638 169 aa21.53■■□□□ 1.04
POLR2J3-205ENST00000489144 LPIN2Q92539 896 aa21.53■■□□□ 1.04
POLR2J3-205ENST00000489144 TSPYL1Q9H0U9 437 aa21.53■■□□□ 1.04
POLR2J3-205ENST00000489144 KIF3AQ9Y496 699 aa21.53■■□□□ 1.04
POLR2J3-205ENST00000489144 LAMB2P55268 1798 aa21.53■■□□□ 1.04
POLR2J3-205ENST00000489144 SF3B3Q15393 1217 aaKnown RBP21.52■■□□□ 1.04
POLR2J3-205ENST00000489144 AXDND1Q5T1B0 1012 aaPredicted RBP21.52■■□□□ 1.04
POLR2J3-205ENST00000489144 HOMEZQ8IX15 550 aa21.52■■□□□ 1.04
POLR2J3-205ENST00000489144 FEZ1Q99689 392 aa21.52■■□□□ 1.04
POLR2J3-205ENST00000489144 CCDC39Q9UFE4 941 aa21.52■■□□□ 1.04
POLR2J3-205ENST00000489144 CARMIL3Q8ND23 1372 aa21.52■■□□□ 1.04
POLR2J3-205ENST00000489144 MED23Q9ULK4 1368 aa21.52■■□□□ 1.04
POLR2J3-205ENST00000489144 APPP05067 770 aa21.52■■□□□ 1.04
POLR2J3-205ENST00000489144 GYG1P46976 350 aa21.52■■□□□ 1.04
POLR2J3-205ENST00000489144 PRR5LQ6MZQ0 368 aa21.52■■□□□ 1.04
POLR2J3-205ENST00000489144 M0R2C6 588 aa21.51■■□□□ 1.03
POLR2J3-205ENST00000489144 HIP1O00291 1037 aa21.51■■□□□ 1.03
POLR2J3-205ENST00000489144 CYP2E1P05181 493 aaPredicted RBP21.51■■□□□ 1.03
POLR2J3-205ENST00000489144 DDR1Q08345 913 aa21.51■■□□□ 1.03
POLR2J3-205ENST00000489144 WASHC4Q2M389 1173 aa21.51■■□□□ 1.03
POLR2J3-205ENST00000489144 TCEANC2Q96MN5 208 aa21.51■■□□□ 1.03
POLR2J3-205ENST00000489144 PIH1D3Q9NQM4 214 aaKnown RBP21.51■■□□□ 1.03
POLR2J3-205ENST00000489144 IDH1O75874 414 aaKnown RBP21.51■■□□□ 1.03
POLR2J3-205ENST00000489144 SLC5A1P13866 664 aa21.51■■□□□ 1.03
POLR2J3-205ENST00000489144 TRIM34Q9BYJ4 488 aa21.51■■□□□ 1.03
POLR2J3-205ENST00000489144 MINPP1Q9UNW1 487 aa21.51■■□□□ 1.03
POLR2J3-205ENST00000489144 COL23A1Q86Y22 540 aaPredicted RBP21.5■■□□□ 1.03
POLR2J3-205ENST00000489144 MYO5AQ9Y4I1 1855 aaKnown RBP21.5■■□□□ 1.03
POLR2J3-205ENST00000489144 CAPN2P17655 700 aa21.5■■□□□ 1.03
POLR2J3-205ENST00000489144 EN1Q05925 392 aaPredicted RBP21.5■■□□□ 1.03
POLR2J3-205ENST00000489144 RASGRF1Q13972 1273 aa21.5■■□□□ 1.03
POLR2J3-205ENST00000489144 SLC10A5Q5PT55 438 aa21.5■■□□□ 1.03
POLR2J3-205ENST00000489144 OSBP2Q969R2 916 aa21.5■■□□□ 1.03
POLR2J3-205ENST00000489144 COL24A1Q17RW2 1714 aa21.5■■□□□ 1.03
POLR2J3-205ENST00000489144 ST18O60284 1047 aa21.49■■□□□ 1.03
POLR2J3-205ENST00000489144 SERPINB2P05120 415 aa21.49■■□□□ 1.03
POLR2J3-205ENST00000489144 HSP90B1P14625 803 aaKnown RBP21.49■■□□□ 1.03
POLR2J3-205ENST00000489144 CASTP20810 708 aaKnown RBP21.49■■□□□ 1.03
POLR2J3-205ENST00000489144 SSFA2P28290 1259 aa21.49■■□□□ 1.03
POLR2J3-205ENST00000489144 CIZ1Q9ULV3 898 aaPredicted RBP21.49■■□□□ 1.03
POLR2J3-205ENST00000489144 MCMDC2Q4G0Z9 681 aa21.49■■□□□ 1.03
POLR2J3-205ENST00000489144 CREB3L3Q68CJ9 461 aa21.49■■□□□ 1.03
POLR2J3-205ENST00000489144 ZNF622Q969S3 477 aaKnown RBP eCLIP21.49■■□□□ 1.03
POLR2J3-205ENST00000489144 JAKMIP1Q96N16 626 aaKnown RBP21.49■■□□□ 1.03
POLR2J3-205ENST00000489144 GPR101Q96P66 508 aaPredicted RBP21.49■■□□□ 1.03
POLR2J3-205ENST00000489144 HMG20BQ9P0W2 317 aa21.49■■□□□ 1.03
POLR2J3-205ENST00000489144 JAG2Q9Y219 1238 aa21.49■■□□□ 1.03
POLR2J3-205ENST00000489144 UTRNP46939 3433 aa21.48■■□□□ 1.03
POLR2J3-205ENST00000489144 TM4SF1P30408 202 aa21.48■■□□□ 1.03
POLR2J3-205ENST00000489144 RPS8P62241 208 aaKnown RBP21.48■■□□□ 1.03
POLR2J3-205ENST00000489144 EZH2Q15910 746 aaKnown RBP21.48■■□□□ 1.03
POLR2J3-205ENST00000489144 ZGPATQ8N5A5 531 aaKnown RBP21.48■■□□□ 1.03
POLR2J3-205ENST00000489144 MAST3O60307 1309 aa21.48■■□□□ 1.03
POLR2J3-205ENST00000489144 ADRA2BP18089 450 aa21.48■■□□□ 1.03
POLR2J3-205ENST00000489144 ZNF445P59923 1031 aa21.48■■□□□ 1.03
POLR2J3-205ENST00000489144 MAP4K1Q92918 833 aa21.48■■□□□ 1.03
POLR2J3-205ENST00000489144 RTL9Q8NET4 1388 aa21.48■■□□□ 1.03
POLR2J3-205ENST00000489144 SLC27A2O14975 620 aa21.47■■□□□ 1.03
POLR2J3-205ENST00000489144 RNF113AO15541 343 aaKnown RBP21.47■■□□□ 1.03
POLR2J3-205ENST00000489144 MYCNP04198 464 aaPredicted RBP21.47■■□□□ 1.03
POLR2J3-205ENST00000489144 NECTIN1Q15223 517 aa21.47■■□□□ 1.03
POLR2J3-205ENST00000489144 PUS7LQ9H0K6 701 aaKnown RBP21.47■■□□□ 1.03
POLR2J3-205ENST00000489144 OGFRQ9NZT2 677 aa21.47■■□□□ 1.03
POLR2J3-205ENST00000489144 AKAP11Q9UKA4 1901 aa21.47■■□□□ 1.03
POLR2J3-205ENST00000489144 BSDC1Q9NW68 430 aaPredicted RBP21.47■■□□□ 1.03
POLR2J3-205ENST00000489144 WWC3Q9ULE0 1092 aa21.47■■□□□ 1.03
POLR2J3-205ENST00000489144 KIAA2012Q0VF49 1180 aa21.46■■□□□ 1.03
POLR2J3-205ENST00000489144 ZMYM1Q5SVZ6 1142 aa21.46■■□□□ 1.03
POLR2J3-205ENST00000489144 PLSCR1O15162 318 aa21.45■■□□□ 1.03
POLR2J3-205ENST00000489144 SLFN14P0C7P3 912 aa21.45■■□□□ 1.03
POLR2J3-205ENST00000489144 U2AF2P26368 475 aaKnown RBP eCLIP21.45■■□□□ 1.03
POLR2J3-205ENST00000489144 KLHL40Q2TBA0 621 aa21.45■■□□□ 1.03
POLR2J3-205ENST00000489144 AKT1S1Q96B36 256 aa21.45■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms