RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 PGBD3Q8N328 593 aa8.4□□□□□ -1.06
PDCD4-209ENST00000489049 KLRG1Q96E93 195 aa8.4□□□□□ -1.06
PDCD4-209ENST00000489049 IGSF1Q8N6C5 1336 aa8.39□□□□□ -1.07
PDCD4-209ENST00000489049 SHISA8B8ZZ34 492 aa8.39□□□□□ -1.07
PDCD4-209ENST00000489049 ITGB2P05107 769 aa8.39□□□□□ -1.07
PDCD4-209ENST00000489049 PSME1Q06323 249 aa8.39□□□□□ -1.07
PDCD4-209ENST00000489049 MVPQ14764 893 aaKnown RBP8.39□□□□□ -1.07
PDCD4-209ENST00000489049 TLR1Q15399 786 aa8.39□□□□□ -1.07
PDCD4-209ENST00000489049 OXLD1Q5BKU9 147 aa8.39□□□□□ -1.07
PDCD4-209ENST00000489049 SULT6B1Q6IMI4 303 aa8.39□□□□□ -1.07
PDCD4-209ENST00000489049 ABTB2Q8N961 1025 aa8.39□□□□□ -1.07
PDCD4-209ENST00000489049 FRAT1Q92837 279 aaPredicted RBP8.39□□□□□ -1.07
PDCD4-209ENST00000489049 PHACTR3Q96KR7 559 aa8.39□□□□□ -1.07
PDCD4-209ENST00000489049 GDPD2Q9HCC8 539 aa8.39□□□□□ -1.07
PDCD4-209ENST00000489049 ATXN7L1Q9ULK2 861 aaPredicted RBP8.39□□□□□ -1.07
PDCD4-209ENST00000489049 CHL1O00533 1208 aa8.38□□□□□ -1.07
PDCD4-209ENST00000489049 MSTNO14793 375 aa8.38□□□□□ -1.07
PDCD4-209ENST00000489049 HMOX1P09601 288 aa8.38□□□□□ -1.07
PDCD4-209ENST00000489049 ANP32AP39687 249 aaKnown RBP8.38□□□□□ -1.07
PDCD4-209ENST00000489049 HDAC1Q13547 482 aaPredicted RBP8.38□□□□□ -1.07
PDCD4-209ENST00000489049 HSP90AB2PQ58FF8 381 aa8.38□□□□□ -1.07
PDCD4-209ENST00000489049 EFHC2Q5JST6 749 aa8.38□□□□□ -1.07
PDCD4-209ENST00000489049 C1orf229Q6ZS94 237 aaPredicted RBP8.38□□□□□ -1.07
PDCD4-209ENST00000489049 PROSER2Q86WR7 435 aaPredicted RBP8.38□□□□□ -1.07
PDCD4-209ENST00000489049 SSH1Q8WYL5 1049 aa8.38□□□□□ -1.07
PDCD4-209ENST00000489049 RTF1Q92541 710 aaKnown RBP8.38□□□□□ -1.07
PDCD4-209ENST00000489049 IP6K1Q92551 441 aa8.38□□□□□ -1.07
PDCD4-209ENST00000489049 API5Q9BZZ5 524 aaKnown RBP8.38□□□□□ -1.07
PDCD4-209ENST00000489049 GDF2Q9UK05 429 aaPredicted RBP8.38□□□□□ -1.07
PDCD4-209ENST00000489049 RGPD1P0DJD0 1748 aa8.37□□□□□ -1.07
PDCD4-209ENST00000489049 EIF5BO60841 1220 aaKnown RBP8.37□□□□□ -1.07
PDCD4-209ENST00000489049 SNRPNP63162 240 aaKnown RBP8.37□□□□□ -1.07
PDCD4-209ENST00000489049 VAC14Q08AM6 782 aa8.37□□□□□ -1.07
PDCD4-209ENST00000489049 GALNT6Q8NCL4 622 aa8.37□□□□□ -1.07
PDCD4-209ENST00000489049 ABHD17AQ96GS6 310 aa8.37□□□□□ -1.07
PDCD4-209ENST00000489049 SPOCK3Q9BQ16 436 aa8.37□□□□□ -1.07
PDCD4-209ENST00000489049 BACH2Q9BYV9 841 aa8.37□□□□□ -1.07
PDCD4-209ENST00000489049 CRISPLD1Q9H336 500 aa8.37□□□□□ -1.07
PDCD4-209ENST00000489049 KIF1AQ12756 1690 aa8.37□□□□□ -1.07
PDCD4-209ENST00000489049 VAMP4O75379 141 aa8.36□□□□□ -1.07
PDCD4-209ENST00000489049 HOXC9P31274 260 aa8.36□□□□□ -1.07
PDCD4-209ENST00000489049 ABL2P42684 1182 aa8.36□□□□□ -1.07
PDCD4-209ENST00000489049 SCNN1DP51172 638 aa8.36□□□□□ -1.07
PDCD4-209ENST00000489049 GOLGA6L1Q8N7Z2 621 aa8.36□□□□□ -1.07
PDCD4-209ENST00000489049 PANK1Q8TE04 598 aa8.36□□□□□ -1.07
PDCD4-209ENST00000489049 TSR2Q969E8 191 aaKnown RBP8.36□□□□□ -1.07
PDCD4-209ENST00000489049 NDFIP2Q9NV92 336 aa8.36□□□□□ -1.07
PDCD4-209ENST00000489049 COG6Q9Y2V7 657 aa8.36□□□□□ -1.07
PDCD4-209ENST00000489049 PIK3C2AO00443 1686 aa8.36□□□□□ -1.07
PDCD4-209ENST00000489049 PHRF1Q9P1Y6 1649 aaKnown RBP8.36□□□□□ -1.07
PDCD4-209ENST00000489049 PTPRCP08575 1304 aa8.35□□□□□ -1.07
PDCD4-209ENST00000489049 C2CD2LO14523 706 aa8.35□□□□□ -1.07
PDCD4-209ENST00000489049 BNIP3LO60238 219 aa8.35□□□□□ -1.07
PDCD4-209ENST00000489049 PROCP04070 461 aa8.35□□□□□ -1.07
PDCD4-209ENST00000489049 INHAP05111 366 aa8.35□□□□□ -1.07
PDCD4-209ENST00000489049 BMP4P12644 408 aa8.35□□□□□ -1.07
PDCD4-209ENST00000489049 TRIM27P14373 513 aa8.35□□□□□ -1.07
PDCD4-209ENST00000489049 ATF3P18847 181 aa8.35□□□□□ -1.07
PDCD4-209ENST00000489049 FGFR3P22607 806 aa8.35□□□□□ -1.07
PDCD4-209ENST00000489049 FBLN1P23142 703 aa8.35□□□□□ -1.07
PDCD4-209ENST00000489049 PLA2G4AP47712 749 aa8.35□□□□□ -1.07
PDCD4-209ENST00000489049 GDF10P55107 478 aa8.35□□□□□ -1.07
PDCD4-209ENST00000489049 TWISTNBQ3B726 338 aaPredicted RBP8.35□□□□□ -1.07
PDCD4-209ENST00000489049 AMOTQ4VCS5 1084 aa8.35□□□□□ -1.07
PDCD4-209ENST00000489049 TBC1D9Q6ZT07 1266 aa8.35□□□□□ -1.07
PDCD4-209ENST00000489049 EDARADDQ8WWZ3 215 aa8.35□□□□□ -1.07
PDCD4-209ENST00000489049 ZMYND15Q9H091 742 aa8.35□□□□□ -1.07
PDCD4-209ENST00000489049 MKL2Q9ULH7 1088 aa8.35□□□□□ -1.07
PDCD4-209ENST00000489049 USP19O94966 1318 aa8.34□□□□□ -1.07
PDCD4-209ENST00000489049 GNAT3A8MTJ3 354 aa8.34□□□□□ -1.07
PDCD4-209ENST00000489049 HOMEZQ8IX15 550 aa8.34□□□□□ -1.07
PDCD4-209ENST00000489049 ZBTB40Q9NUA8 1239 aa8.34□□□□□ -1.07
PDCD4-209ENST00000489049 DNAAF2Q9NVR5 837 aaKnown RBP8.34□□□□□ -1.07
PDCD4-209ENST00000489049 NOB1Q9ULX3 412 aaKnown RBP8.34□□□□□ -1.07
PDCD4-209ENST00000489049 RGPD8O14715 1765 aaPredicted RBP8.33□□□□□ -1.08
PDCD4-209ENST00000489049 ATP4AP20648 1035 aa8.33□□□□□ -1.08
PDCD4-209ENST00000489049 WASHC4Q2M389 1173 aa8.33□□□□□ -1.08
PDCD4-209ENST00000489049 MAP7D1Q3KQU3 841 aa8.33□□□□□ -1.08
PDCD4-209ENST00000489049 SLCO4C1Q6ZQN7 724 aa8.33□□□□□ -1.08
PDCD4-209ENST00000489049 PLPP7Q8NBV4 271 aa8.33□□□□□ -1.08
PDCD4-209ENST00000489049 PEAK1Q9H792 1746 aa8.33□□□□□ -1.08
PDCD4-209ENST00000489049 SLIT3O75094 1523 aa8.33□□□□□ -1.08
PDCD4-209ENST00000489049 ABCC6O95255 1503 aa8.33□□□□□ -1.08
PDCD4-209ENST00000489049 C1orf167Q5SNV9 1468 aa8.32□□□□□ -1.08
PDCD4-209ENST00000489049 OVOS2A0A0G2JMS6 1433 aa8.32□□□□□ -1.08
PDCD4-209ENST00000489049 CRB1P82279 1406 aa8.32□□□□□ -1.08
PDCD4-209ENST00000489049 HOXB7P09629 217 aa8.32□□□□□ -1.08
PDCD4-209ENST00000489049 RLBP1P12271 317 aa8.32□□□□□ -1.08
PDCD4-209ENST00000489049 CTBSQ01459 385 aa8.32□□□□□ -1.08
PDCD4-209ENST00000489049 PLEKHO1Q53GL0 409 aaPredicted RBP8.32□□□□□ -1.08
PDCD4-209ENST00000489049 FIGNL1Q6PIW4 674 aa8.32□□□□□ -1.08
PDCD4-209ENST00000489049 KRT28Q7Z3Y7 464 aa8.32□□□□□ -1.08
PDCD4-209ENST00000489049 AEBP1Q8IUX7 1158 aa8.32□□□□□ -1.08
PDCD4-209ENST00000489049 C1orf216Q8TAB5 229 aa8.32□□□□□ -1.08
PDCD4-209ENST00000489049 POM121Q96HA1 1249 aa8.32□□□□□ -1.08
PDCD4-209ENST00000489049 RRAGCQ9HB90 399 aa8.32□□□□□ -1.08
PDCD4-209ENST00000489049 LAS1LQ9Y4W2 734 aaKnown RBP8.32□□□□□ -1.08
PDCD4-209ENST00000489049 NFAT5O94916 1531 aa8.32□□□□□ -1.08
PDCD4-209ENST00000489049 MAP3K5Q99683 1374 aa8.32□□□□□ -1.08
PDCD4-209ENST00000489049 ABCC4O15439 1325 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms