RNA–Protein interactions for RNA: ENST00000488946.1

RPL13A-212, Transcript of ribosomal protein L13a, humanhuman

TSL 2

Gene RPL13A, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-212ENST00000488946 SYCE3A1L190 88 aa16.8■□□□□ 0.28
RPL13A-212ENST00000488946 RGL2O15211 777 aa16.8■□□□□ 0.28
RPL13A-212ENST00000488946 TOB2Q14106 344 aaPredicted RBP16.8■□□□□ 0.28
RPL13A-212ENST00000488946 DEFB132Q7Z7B7 95 aa16.8■□□□□ 0.28
RPL13A-212ENST00000488946 CCDC83Q8IWF9 413 aa16.8■□□□□ 0.28
RPL13A-212ENST00000488946 CHAMP1Q96JM3 812 aa16.8■□□□□ 0.28
RPL13A-212ENST00000488946 NSFL1CQ9UNZ2 370 aaKnown RBP16.8■□□□□ 0.28
RPL13A-212ENST00000488946 SMC3Q9UQE7 1217 aa16.8■□□□□ 0.28
RPL13A-212ENST00000488946 MROH5Q6ZUA9 1318 aa16.8■□□□□ 0.28
RPL13A-212ENST00000488946 CNTNAP4Q9C0A0 1308 aa16.8■□□□□ 0.28
RPL13A-212ENST00000488946 PLSCR1O15162 318 aa16.79■□□□□ 0.28
RPL13A-212ENST00000488946 PDE8BO95263 885 aa16.79■□□□□ 0.28
RPL13A-212ENST00000488946 A0A1B0GUL6 1792 aa16.79■□□□□ 0.28
RPL13A-212ENST00000488946 MCM5P33992 734 aa16.79■□□□□ 0.28
RPL13A-212ENST00000488946 EN1Q05925 392 aaPredicted RBP16.79■□□□□ 0.28
RPL13A-212ENST00000488946 SLFNL1Q499Z3 407 aa16.79■□□□□ 0.28
RPL13A-212ENST00000488946 DOCK2Q92608 1830 aa16.78■□□□□ 0.28
RPL13A-212ENST00000488946 RGPD3A6NKT7 1758 aaPredicted RBP16.78■□□□□ 0.28
RPL13A-212ENST00000488946 HSP90B1P14625 803 aaKnown RBP16.78■□□□□ 0.28
RPL13A-212ENST00000488946 FGFR2P21802 821 aa16.78■□□□□ 0.28
RPL13A-212ENST00000488946 FKBP4Q02790 459 aaKnown RBP eCLIP16.78■□□□□ 0.28
RPL13A-212ENST00000488946 COL24A1Q17RW2 1714 aa16.78■□□□□ 0.28
RPL13A-212ENST00000488946 RGPD4Q7Z3J3 1758 aa16.78■□□□□ 0.28
RPL13A-212ENST00000488946 LINC00116Q8NCU8 138 aa16.78■□□□□ 0.28
RPL13A-212ENST00000488946 NEK1Q96PY6 1258 aa16.78■□□□□ 0.28
RPL13A-212ENST00000488946 M0R2C6 588 aa16.78■□□□□ 0.28
RPL13A-212ENST00000488946 MBD3O95983 291 aa16.78■□□□□ 0.28
RPL13A-212ENST00000488946 HSPD1P10809 573 aaKnown RBP16.78■□□□□ 0.28
RPL13A-212ENST00000488946 SYT1P21579 422 aa16.78■□□□□ 0.28
RPL13A-212ENST00000488946 ZAP70P43403 619 aa16.78■□□□□ 0.28
RPL13A-212ENST00000488946 CLEC4GQ6UXB4 293 aa16.78■□□□□ 0.28
RPL13A-212ENST00000488946 ZNF652Q9Y2D9 606 aa16.78■□□□□ 0.28
RPL13A-212ENST00000488946 STX6O43752 255 aa16.77■□□□□ 0.28
RPL13A-212ENST00000488946 ZSCAN22P10073 491 aaPredicted RBP16.77■□□□□ 0.28
RPL13A-212ENST00000488946 HCLS1P14317 486 aaPredicted RBP16.77■□□□□ 0.28
RPL13A-212ENST00000488946 ARID4AP29374 1257 aaPredicted RBP16.77■□□□□ 0.28
RPL13A-212ENST00000488946 MCAMP43121 646 aa16.77■□□□□ 0.28
RPL13A-212ENST00000488946 PUM3Q15397 648 aaKnown RBP16.77■□□□□ 0.28
RPL13A-212ENST00000488946 FOXD4L5Q5VV16 416 aaPredicted RBP16.77■□□□□ 0.28
RPL13A-212ENST00000488946 FOXD4L4Q8WXT5 416 aaPredicted RBP16.77■□□□□ 0.28
RPL13A-212ENST00000488946 OSBP2Q969R2 916 aa16.77■□□□□ 0.28
RPL13A-212ENST00000488946 LY75O60449 1722 aa16.77■□□□□ 0.27
RPL13A-212ENST00000488946 STOX1Q6ZVD7 989 aa16.76■□□□□ 0.27
RPL13A-212ENST00000488946 CAMKK2Q96RR4 588 aa16.76■□□□□ 0.27
RPL13A-212ENST00000488946 CCDC39Q9UFE4 941 aa16.76■□□□□ 0.27
RPL13A-212ENST00000488946 NIP7Q9Y221 180 aaKnown RBP eCLIP16.76■□□□□ 0.276e-75■□□□□ 10.1
RPL13A-212ENST00000488946 GJB2P29033 226 aa16.76■□□□□ 0.27
RPL13A-212ENST00000488946 CSPP1Q1MSJ5 1256 aa16.76■□□□□ 0.27
RPL13A-212ENST00000488946 SASS6Q6UVJ0 657 aa16.76■□□□□ 0.27
RPL13A-212ENST00000488946 LPIN2Q92539 896 aa16.76■□□□□ 0.27
RPL13A-212ENST00000488946 APPBP2Q92624 585 aa16.76■□□□□ 0.27
RPL13A-212ENST00000488946 HMGB1P09429 215 aaKnown RBP16.75■□□□□ 0.27
RPL13A-212ENST00000488946 CCDC152Q4G0S7 254 aa16.75■□□□□ 0.27
RPL13A-212ENST00000488946 TMEM87AQ8NBN3 555 aa16.75■□□□□ 0.27
RPL13A-212ENST00000488946 ZFP91Q96JP5 570 aaPredicted RBP16.75■□□□□ 0.27
RPL13A-212ENST00000488946 TCEANC2Q96MN5 208 aa16.75■□□□□ 0.27
RPL13A-212ENST00000488946 UQCRFS1P1P0C7P4 283 aa16.75■□□□□ 0.27
RPL13A-212ENST00000488946 EZH2Q15910 746 aaKnown RBP16.75■□□□□ 0.27
RPL13A-212ENST00000488946 NECAB1Q8N987 351 aa16.75■□□□□ 0.27
RPL13A-212ENST00000488946 MYO5AQ9Y4I1 1855 aaKnown RBP16.75■□□□□ 0.27
RPL13A-212ENST00000488946 COL4A1P02462 1669 aa16.74■□□□□ 0.27
RPL13A-212ENST00000488946 TAF1LQ8IZX4 1826 aa16.74■□□□□ 0.27
RPL13A-212ENST00000488946 FOXP2O15409 715 aa16.74■□□□□ 0.27
RPL13A-212ENST00000488946 PI16Q6UXB8 463 aa16.74■□□□□ 0.27
RPL13A-212ENST00000488946 F13A1P00488 732 aa16.74■□□□□ 0.27
RPL13A-212ENST00000488946 TTF1Q15361 905 aaPredicted RBP16.74■□□□□ 0.27
RPL13A-212ENST00000488946 CCDC102BQ68D86 513 aa16.74■□□□□ 0.27
RPL13A-212ENST00000488946 MTMR6Q9Y217 621 aa16.74■□□□□ 0.27
RPL13A-212ENST00000488946 RC3H1Q5TC82 1133 aaKnown RBP16.73■□□□□ 0.27
RPL13A-212ENST00000488946 TEX2Q8IWB9 1127 aa16.73■□□□□ 0.27
RPL13A-212ENST00000488946 AGXT2Q9BYV1 514 aa16.73■□□□□ 0.27
RPL13A-212ENST00000488946 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.73■□□□□ 0.27
RPL13A-212ENST00000488946 TCHHQ07283 1943 aa16.73■□□□□ 0.27
RPL13A-212ENST00000488946 PHKA1P46020 1223 aa16.73■□□□□ 0.27
RPL13A-212ENST00000488946 ZSCAN25Q6NSZ9 544 aa16.73■□□□□ 0.27
RPL13A-212ENST00000488946 CHRM1P11229 460 aaPredicted RBP16.72■□□□□ 0.27
RPL13A-212ENST00000488946 SLC5A1P13866 664 aa16.72■□□□□ 0.27
RPL13A-212ENST00000488946 ADD2P35612 726 aa16.72■□□□□ 0.27
RPL13A-212ENST00000488946 DHX32Q7L7V1 743 aaKnown RBP16.72■□□□□ 0.27
RPL13A-212ENST00000488946 RNF214Q8ND24 703 aa16.72■□□□□ 0.27
RPL13A-212ENST00000488946 GTF3C6Q969F1 213 aa16.72■□□□□ 0.27
RPL13A-212ENST00000488946 SEC31BQ9NQW1 1179 aa16.72■□□□□ 0.27
RPL13A-212ENST00000488946 FAM177BA6PVY3 158 aa16.71■□□□□ 0.27
RPL13A-212ENST00000488946 CBX1P83916 185 aa16.71■□□□□ 0.27
RPL13A-212ENST00000488946 EXOSC10Q01780 885 aaKnown RBP16.71■□□□□ 0.27
RPL13A-212ENST00000488946 TXNRD1Q16881 649 aa16.71■□□□□ 0.27
RPL13A-212ENST00000488946 Q6ZUG5 572 aa16.71■□□□□ 0.27
RPL13A-212ENST00000488946 MPHOSPH8Q99549 860 aa16.71■□□□□ 0.27
RPL13A-212ENST00000488946 CTNNA3Q9UI47 895 aa16.71■□□□□ 0.27
RPL13A-212ENST00000488946 ATP6V1DQ9Y5K8 247 aa16.71■□□□□ 0.27
RPL13A-212ENST00000488946 E7EWF7 191 aa16.71■□□□□ 0.27
RPL13A-212ENST00000488946 WASHC4Q2M389 1173 aa16.71■□□□□ 0.27
RPL13A-212ENST00000488946 PIH1D3Q9NQM4 214 aaKnown RBP16.71■□□□□ 0.27
RPL13A-212ENST00000488946 CDK11BP21127 795 aaKnown RBP16.7■□□□□ 0.26
RPL13A-212ENST00000488946 UBE3CQ15386 1083 aa16.7■□□□□ 0.26
RPL13A-212ENST00000488946 FBXL16Q8N461 479 aa16.7■□□□□ 0.26
RPL13A-212ENST00000488946 PUS7LQ9H0K6 701 aaKnown RBP16.7■□□□□ 0.26
RPL13A-212ENST00000488946 TSPY26PQ9H489 355 aa16.7■□□□□ 0.26
RPL13A-212ENST00000488946 C4AP0C0L4 1744 aa16.7■□□□□ 0.26
RPL13A-212ENST00000488946 C4BP0C0L5 1744 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms