RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 WNK3Q9BYP7 1800 aa7.04□□□□□ -1.28
SF3A3-207ENST00000488934 OVOS2A0A0J9YW53 1432 aa7.04□□□□□ -1.28
SF3A3-207ENST00000488934 CRB1P82279 1406 aa7.04□□□□□ -1.28
SF3A3-207ENST00000488934 OVOS2Q6IE36 1432 aa7.04□□□□□ -1.28
SF3A3-207ENST00000488934 LORP23490 312 aaPredicted RBP7.04□□□□□ -1.28
SF3A3-207ENST00000488934 MAP2K3P46734 347 aa7.04□□□□□ -1.28
SF3A3-207ENST00000488934 GAS6Q14393 721 aa7.04□□□□□ -1.28
SF3A3-207ENST00000488934 CHRNA2Q15822 529 aa7.04□□□□□ -1.28
SF3A3-207ENST00000488934 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.04□□□□□ -1.28
SF3A3-207ENST00000488934 COG3Q96JB2 828 aa7.04□□□□□ -1.28
SF3A3-207ENST00000488934 VRTNQ9H8Y1 702 aa7.04□□□□□ -1.28
SF3A3-207ENST00000488934 STRN4Q9NRL3 753 aa7.04□□□□□ -1.28
SF3A3-207ENST00000488934 ZNF232Q9UNY5 417 aa7.04□□□□□ -1.28
SF3A3-207ENST00000488934 THRAP3Q9Y2W1 955 aaKnown RBP7.04□□□□□ -1.28
SF3A3-207ENST00000488934 COL18A1P39060 1754 aa7.04□□□□□ -1.28
SF3A3-207ENST00000488934 RGPD5Q99666 1765 aa7.04□□□□□ -1.28
SF3A3-207ENST00000488934 BLMP54132 1417 aaPredicted RBP7.03□□□□□ -1.28
SF3A3-207ENST00000488934 RNF225M0QZC1 329 aaPredicted RBP7.03□□□□□ -1.28
SF3A3-207ENST00000488934 ZBTB7BO15156 539 aaPredicted RBP7.03□□□□□ -1.28
SF3A3-207ENST00000488934 LMOD1P29536 600 aaPredicted RBP7.03□□□□□ -1.28
SF3A3-207ENST00000488934 PSMA6P60900 246 aaKnown RBP7.03□□□□□ -1.28
SF3A3-207ENST00000488934 TEAD4Q15561 434 aa7.03□□□□□ -1.28
SF3A3-207ENST00000488934 BICDL1Q6ZP65 573 aa7.03□□□□□ -1.28
SF3A3-207ENST00000488934 SLC9A9Q8IVB4 645 aa7.03□□□□□ -1.28
SF3A3-207ENST00000488934 NEUROD4Q9HD90 331 aa7.03□□□□□ -1.28
SF3A3-207ENST00000488934 GTF3C3Q9Y5Q9 886 aa7.03□□□□□ -1.28
SF3A3-207ENST00000488934 GPC6Q9Y625 555 aaPredicted RBP7.03□□□□□ -1.28
SF3A3-207ENST00000488934 PARP4Q9UKK3 1724 aaKnown RBP7.03□□□□□ -1.28
SF3A3-207ENST00000488934 ANKRD26Q9UPS8 1709 aa7.03□□□□□ -1.28
SF3A3-207ENST00000488934 SPATA31A1Q5TZJ5 1347 aa7.02□□□□□ -1.28
SF3A3-207ENST00000488934 RGPD1P0DJD0 1748 aa7.02□□□□□ -1.29
SF3A3-207ENST00000488934 ZBTB7CA1YPR0 619 aa7.02□□□□□ -1.29
SF3A3-207ENST00000488934 SERTM1A2A2V5 107 aa7.02□□□□□ -1.29
SF3A3-207ENST00000488934 FAM196BA6NMK8 535 aa7.02□□□□□ -1.29
SF3A3-207ENST00000488934 HSPA5P11021 654 aaKnown RBP7.02□□□□□ -1.29
SF3A3-207ENST00000488934 ATP4AP20648 1035 aa7.02□□□□□ -1.29
SF3A3-207ENST00000488934 EPHA4P54764 986 aa7.02□□□□□ -1.29
SF3A3-207ENST00000488934 SEC13P55735 322 aa7.02□□□□□ -1.29
SF3A3-207ENST00000488934 FOXK2Q01167 660 aa7.02□□□□□ -1.29
SF3A3-207ENST00000488934 KRT27Q7Z3Y8 459 aa7.02□□□□□ -1.29
SF3A3-207ENST00000488934 ARHGEF25Q86VW2 580 aa7.02□□□□□ -1.29
SF3A3-207ENST00000488934 NME9Q86XW9 330 aa7.02□□□□□ -1.29
SF3A3-207ENST00000488934 TNS4Q8IZW8 715 aa7.02□□□□□ -1.29
SF3A3-207ENST00000488934 TCP11L2Q8N4U5 519 aa7.02□□□□□ -1.29
SF3A3-207ENST00000488934 ZMYND15Q9H091 742 aa7.02□□□□□ -1.29
SF3A3-207ENST00000488934 KIAA1024Q9UPX6 916 aa7.02□□□□□ -1.29
SF3A3-207ENST00000488934 RTL1A6NKG5 1358 aa7.02□□□□□ -1.29
SF3A3-207ENST00000488934 WDR17Q8IZU2 1322 aa7.01□□□□□ -1.29
SF3A3-207ENST00000488934 KIF24Q5T7B8 1368 aa7.01□□□□□ -1.29
SF3A3-207ENST00000488934 CCDC7Q96M83 1385 aa7.01□□□□□ -1.29
SF3A3-207ENST00000488934 NOS2P35228 1153 aa7.01□□□□□ -1.29
SF3A3-207ENST00000488934 SF3B2Q13435 895 aaKnown RBP7.01□□□□□ -1.29
SF3A3-207ENST00000488934 ZNF385CQ66K41 422 aaPredicted RBP7.01□□□□□ -1.29
SF3A3-207ENST00000488934 TOM1L2Q6ZVM7 507 aa7.01□□□□□ -1.29
SF3A3-207ENST00000488934 GAS2L2Q8NHY3 880 aa7.01□□□□□ -1.29
SF3A3-207ENST00000488934 PCDHGC4Q9Y5F7 938 aa7.01□□□□□ -1.29
SF3A3-207ENST00000488934 SMG6Q86US8 1419 aaKnown RBP7.01□□□□□ -1.29
SF3A3-207ENST00000488934 NSD3Q9BZ95 1437 aa7.01□□□□□ -1.29
SF3A3-207ENST00000488934 CGNL1Q0VF96 1302 aa7.01□□□□□ -1.29
SF3A3-207ENST00000488934 NSD2O96028 1365 aa7□□□□□ -1.29
SF3A3-207ENST00000488934 A0A1W2PNR3 127 aa7□□□□□ -1.29
SF3A3-207ENST00000488934 ATXN7O15265 892 aaPredicted RBP7□□□□□ -1.29
SF3A3-207ENST00000488934 FGFR3P22607 806 aa7□□□□□ -1.29
SF3A3-207ENST00000488934 ZNF295-AS1Q8N0V1 137 aa7□□□□□ -1.29
SF3A3-207ENST00000488934 LRRC4BQ9NT99 713 aa7□□□□□ -1.29
SF3A3-207ENST00000488934 USP35Q9P2H5 1018 aa7□□□□□ -1.29
SF3A3-207ENST00000488934 LRRC37A3O60309 1634 aa7□□□□□ -1.29
SF3A3-207ENST00000488934 SFI1A8K8P3 1242 aa6.99□□□□□ -1.29
SF3A3-207ENST00000488934 USP17L15C9J2P7 530 aa6.99□□□□□ -1.29
SF3A3-207ENST00000488934 USP17L10C9JJH3 530 aa6.99□□□□□ -1.29
SF3A3-207ENST00000488934 USP17L13C9JLJ4 530 aa6.99□□□□□ -1.29
SF3A3-207ENST00000488934 USP17L12C9JPN9 530 aa6.99□□□□□ -1.29
SF3A3-207ENST00000488934 USP17L11C9JVI0 530 aa6.99□□□□□ -1.29
SF3A3-207ENST00000488934 USP17L21D6R901 530 aa6.99□□□□□ -1.29
SF3A3-207ENST00000488934 USP17L18D6R9N7 530 aa6.99□□□□□ -1.29
SF3A3-207ENST00000488934 USP17L22D6RA61 530 aa6.99□□□□□ -1.29
SF3A3-207ENST00000488934 USP17L17D6RBQ6 530 aa6.99□□□□□ -1.29
SF3A3-207ENST00000488934 USP17L19D6RCP7 530 aa6.99□□□□□ -1.29
SF3A3-207ENST00000488934 USP17L20D6RJB6 530 aa6.99□□□□□ -1.29
SF3A3-207ENST00000488934 BMP4P12644 408 aa6.99□□□□□ -1.29
SF3A3-207ENST00000488934 MARSP56192 900 aaKnown RBP6.99□□□□□ -1.29
SF3A3-207ENST00000488934 USP17L24Q0WX57 530 aa6.99□□□□□ -1.29
SF3A3-207ENST00000488934 PDE3BQ13370 1112 aa6.99□□□□□ -1.29
SF3A3-207ENST00000488934 TSEN2Q8NCE0 465 aaKnown RBP6.99□□□□□ -1.29
SF3A3-207ENST00000488934 ABHD17AQ96GS6 310 aa6.99□□□□□ -1.29
SF3A3-207ENST00000488934 HINFPQ9BQA5 517 aa6.99□□□□□ -1.29
SF3A3-207ENST00000488934 POLR3GLQ9BT43 218 aa6.99□□□□□ -1.29
SF3A3-207ENST00000488934 ZCCHC2Q9C0B9 1178 aaKnown RBP6.99□□□□□ -1.29
SF3A3-207ENST00000488934 TSPAN10Q9H1Z9 355 aaPredicted RBP6.99□□□□□ -1.29
SF3A3-207ENST00000488934 GDF2Q9UK05 429 aaPredicted RBP6.99□□□□□ -1.29
SF3A3-207ENST00000488934 PARP3Q9Y6F1 533 aa6.99□□□□□ -1.29
SF3A3-207ENST00000488934 USP3Q9Y6I4 520 aa6.99□□□□□ -1.29
SF3A3-207ENST00000488934 FYB1O15117 783 aa6.98□□□□□ -1.29
SF3A3-207ENST00000488934 PPP1R12BO60237 982 aaPredicted RBP6.98□□□□□ -1.29
SF3A3-207ENST00000488934 THBS1P07996 1170 aa6.98□□□□□ -1.29
SF3A3-207ENST00000488934 CELA2BP08218 269 aaPredicted RBP6.98□□□□□ -1.29
SF3A3-207ENST00000488934 BCRP11274 1271 aa6.98□□□□□ -1.29
SF3A3-207ENST00000488934 AMPHP49418 695 aa6.98□□□□□ -1.29
SF3A3-207ENST00000488934 HIRAP54198 1017 aaPredicted RBP6.98□□□□□ -1.29
SF3A3-207ENST00000488934 DPYDQ12882 1025 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms