RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 ADAMTSL4Q6UY14 1074 aa7□□□□□ -1.29
SSR1-209ENST00000488834 DNAJC14Q6Y2X3 702 aaPredicted RBP7□□□□□ -1.29
SSR1-209ENST00000488834 DTHD1Q6ZMT9 781 aa7□□□□□ -1.29
SSR1-209ENST00000488834 ILDR2Q71H61 639 aa7□□□□□ -1.29
SSR1-209ENST00000488834 KLHL23Q8NBE8 558 aa7□□□□□ -1.29
SSR1-209ENST00000488834 TCF12Q99081 682 aa7□□□□□ -1.29
SSR1-209ENST00000488834 BCO2Q9BYV7 579 aa7□□□□□ -1.29
SSR1-209ENST00000488834 SEC31BQ9NQW1 1179 aa7□□□□□ -1.29
SSR1-209ENST00000488834 SOX13Q9UN79 622 aa7□□□□□ -1.29
SSR1-209ENST00000488834 C9orf172C9J069 976 aa6.99□□□□□ -1.29
SSR1-209ENST00000488834 DEAF1O75398 565 aaPredicted RBP6.99□□□□□ -1.29
SSR1-209ENST00000488834 ITGB7P26010 798 aa6.99□□□□□ -1.29
SSR1-209ENST00000488834 GRIA4P48058 902 aa6.99□□□□□ -1.29
SSR1-209ENST00000488834 MFAP1P55081 439 aaKnown RBP6.99□□□□□ -1.29
SSR1-209ENST00000488834 FCGRTP55899 365 aa6.99□□□□□ -1.29
SSR1-209ENST00000488834 SETDB1Q15047 1291 aa6.99□□□□□ -1.29
SSR1-209ENST00000488834 SETDB2Q96T68 719 aa6.99□□□□□ -1.29
SSR1-209ENST00000488834 CLEC4MQ9H2X3 399 aaPredicted RBP6.99□□□□□ -1.29
SSR1-209ENST00000488834 LOC100996750A0A140TA64 210 aa6.98□□□□□ -1.29
SSR1-209ENST00000488834 TMEM238LA0A1B0GVL6 79 aa6.98□□□□□ -1.29
SSR1-209ENST00000488834 MSTNO14793 375 aa6.98□□□□□ -1.29
SSR1-209ENST00000488834 PRPF40AO75400 957 aaKnown RBP6.98□□□□□ -1.29
SSR1-209ENST00000488834 CD68P34810 354 aaPredicted RBP6.98□□□□□ -1.29
SSR1-209ENST00000488834 NRG1Q02297 640 aaPredicted RBP6.98□□□□□ -1.29
SSR1-209ENST00000488834 PCDH1Q08174 1060 aa6.98□□□□□ -1.29
SSR1-209ENST00000488834 C19orf57Q0VDD7 668 aa6.98□□□□□ -1.29
SSR1-209ENST00000488834 IGF2-ASQ6U949 168 aa6.98□□□□□ -1.29
SSR1-209ENST00000488834 NXPE4Q6UWF7 544 aa6.98□□□□□ -1.29
SSR1-209ENST00000488834 SHISA2Q6UWI4 295 aa6.98□□□□□ -1.29
SSR1-209ENST00000488834 VN1R5Q7Z5H4 357 aa6.98□□□□□ -1.29
SSR1-209ENST00000488834 NPAS4Q8IUM7 802 aa6.98□□□□□ -1.29
SSR1-209ENST00000488834 DDX54Q8TDD1 881 aaKnown RBP6.98□□□□□ -1.29
SSR1-209ENST00000488834 WNT8BQ93098 351 aa6.98□□□□□ -1.29
SSR1-209ENST00000488834 KRTAP4-6Q9BYQ5 205 aa6.98□□□□□ -1.29
SSR1-209ENST00000488834 BCL11AQ9H165 835 aa6.98□□□□□ -1.29
SSR1-209ENST00000488834 AKAP2Q9Y2D5 859 aa6.98□□□□□ -1.29
SSR1-209ENST00000488834 NLRP12P59046 1061 aa6.97□□□□□ -1.29
SSR1-209ENST00000488834 XPCQ01831 940 aaPredicted RBP6.97□□□□□ -1.29
SSR1-209ENST00000488834 PRPF40BQ6NWY9 871 aaKnown RBP6.97□□□□□ -1.29
SSR1-209ENST00000488834 MRPL18Q9H0U6 180 aaKnown RBP6.97□□□□□ -1.29
SSR1-209ENST00000488834 ZFYVE1Q9HBF4 777 aa6.97□□□□□ -1.29
SSR1-209ENST00000488834 ABCB6Q9NP58 842 aa6.97□□□□□ -1.29
SSR1-209ENST00000488834 OSGEPQ9NPF4 335 aa6.97□□□□□ -1.29
SSR1-209ENST00000488834 DLL1O00548 723 aa6.96□□□□□ -1.3
SSR1-209ENST00000488834 GIPC1O14908 333 aa6.96□□□□□ -1.3
SSR1-209ENST00000488834 EIF4EBP3O60516 100 aaPredicted RBP6.96□□□□□ -1.3
SSR1-209ENST00000488834 ESRRAP11474 423 aaPredicted RBP6.96□□□□□ -1.3
SSR1-209ENST00000488834 GSTM4Q03013 218 aa6.96□□□□□ -1.3
SSR1-209ENST00000488834 DUOXA2Q1HG44 320 aa6.96□□□□□ -1.3
SSR1-209ENST00000488834 GALNT11Q8NCW6 608 aa6.96□□□□□ -1.3
SSR1-209ENST00000488834 LENG1Q96BZ8 264 aaPredicted RBP6.96□□□□□ -1.3
SSR1-209ENST00000488834 KLHDC7BQ96G42 594 aa6.96□□□□□ -1.3
SSR1-209ENST00000488834 FRMD6Q96NE9 622 aa6.96□□□□□ -1.3
SSR1-209ENST00000488834 DUSP9Q99956 384 aaKnown RBP6.96□□□□□ -1.3
SSR1-209ENST00000488834 BCL2L13Q9BXK5 485 aa6.96□□□□□ -1.3
SSR1-209ENST00000488834 SRCIN1Q9C0H9 1055 aa6.96□□□□□ -1.3
SSR1-209ENST00000488834 SOX1O00570 391 aaPredicted RBP6.95□□□□□ -1.3
SSR1-209ENST00000488834 FURINP09958 794 aa6.95□□□□□ -1.3
SSR1-209ENST00000488834 XRCC5P13010 732 aaKnown RBP6.95□□□□□ -1.3
SSR1-209ENST00000488834 SELPP16109 830 aa6.95□□□□□ -1.3
SSR1-209ENST00000488834 ITPKAP23677 461 aa6.95□□□□□ -1.3
SSR1-209ENST00000488834 GNA15P30679 374 aa6.95□□□□□ -1.3
SSR1-209ENST00000488834 GSTT1P30711 240 aa6.95□□□□□ -1.3
SSR1-209ENST00000488834 PSMD2Q13200 908 aa6.95□□□□□ -1.3
SSR1-209ENST00000488834 ACAD11Q709F0 780 aa6.95□□□□□ -1.3
SSR1-209ENST00000488834 USP26Q9BXU7 913 aa6.95□□□□□ -1.3
SSR1-209ENST00000488834 ZNF576Q9H609 170 aa6.95□□□□□ -1.3
SSR1-209ENST00000488834 MRS2Q9HD23 443 aa6.95□□□□□ -1.3
SSR1-209ENST00000488834 DDX3YO15523 660 aaKnown RBP6.94□□□□□ -1.3
SSR1-209ENST00000488834 EIF4BP23588 611 aaKnown RBP6.94□□□□□ -1.3
SSR1-209ENST00000488834 GATA4P43694 442 aa6.94□□□□□ -1.3
SSR1-209ENST00000488834 PTPN12Q05209 780 aaKnown RBP6.94□□□□□ -1.3
SSR1-209ENST00000488834 FOXD4L6Q3SYB3 417 aaPredicted RBP6.94□□□□□ -1.3
SSR1-209ENST00000488834 FOXD4L3Q6VB84 417 aaPredicted RBP6.94□□□□□ -1.3
SSR1-209ENST00000488834 GLIS3Q8NEA6 775 aa6.94□□□□□ -1.3
SSR1-209ENST00000488834 GPN3Q9UHW5 284 aaPredicted RBP6.94□□□□□ -1.3
SSR1-209ENST00000488834 IGHA1P01876 353 aa6.93□□□□□ -1.3
SSR1-209ENST00000488834 ITGAEP38570 1179 aa6.93□□□□□ -1.3
SSR1-209ENST00000488834 ZNF157P51786 506 aaPredicted RBP6.93□□□□□ -1.3
SSR1-209ENST00000488834 PPP2R3AQ06190 1150 aa6.93□□□□□ -1.3
SSR1-209ENST00000488834 ZNF423Q2M1K9 1284 aa6.93□□□□□ -1.3
SSR1-209ENST00000488834 ZNF326Q5BKZ1 582 aaKnown RBP6.93□□□□□ -1.3
SSR1-209ENST00000488834 RPS26P11Q5JNZ5 115 aaPredicted RBP6.93□□□□□ -1.3
SSR1-209ENST00000488834 HGSNATQ68CP4 663 aa6.93□□□□□ -1.3
SSR1-209ENST00000488834 OSBPL7Q9BZF2 842 aa6.93□□□□□ -1.3
SSR1-209ENST00000488834 SOX17Q9H6I2 414 aaPredicted RBP6.93□□□□□ -1.3
SSR1-209ENST00000488834 C12orf49Q9H741 205 aa6.93□□□□□ -1.3
SSR1-209ENST00000488834 AKTIPQ9H8T0 292 aa6.93□□□□□ -1.3
SSR1-209ENST00000488834 FAM8A1Q9UBU6 413 aa6.93□□□□□ -1.3
SSR1-209ENST00000488834 CYP11A1P05108 521 aa6.92□□□□□ -1.3
SSR1-209ENST00000488834 USP17L7P0C7H9 530 aa6.92□□□□□ -1.3
SSR1-209ENST00000488834 MBTPS1Q14703 1052 aa6.92□□□□□ -1.3
SSR1-209ENST00000488834 TXNRD3Q86VQ6 643 aa6.92□□□□□ -1.3
SSR1-209ENST00000488834 UBASH3BQ8TF42 649 aa6.92□□□□□ -1.3
SSR1-209ENST00000488834 GIPC2Q8TF65 315 aa6.92□□□□□ -1.3
SSR1-209ENST00000488834 KCNK4Q9NYG8 393 aa6.92□□□□□ -1.3
SSR1-209ENST00000488834 PARP2Q9UGN5 583 aa6.92□□□□□ -1.3
SSR1-209ENST00000488834 ADAM23O75077 832 aa6.91□□□□□ -1.3
SSR1-209ENST00000488834 B3GALT4O96024 378 aa6.91□□□□□ -1.3
SSR1-209ENST00000488834 GLB1P16278 677 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms