RNA–Protein interactions for RNA: ENST00000488774.1

PTPRD-212, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 3

Gene PTPRD, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-212ENST00000488774 COA1Q9GZY4 146 aa8.13□□□□□ -1.11
PTPRD-212ENST00000488774 EXOC6BQ9Y2D4 811 aa8.13□□□□□ -1.11
PTPRD-212ENST00000488774 USP17L3A6NCW0 530 aa8.12□□□□□ -1.11
PTPRD-212ENST00000488774 USP17L4A6NCW7 530 aa8.12□□□□□ -1.11
PTPRD-212ENST00000488774 F8W031 263 aaPredicted RBP8.12□□□□□ -1.11
PTPRD-212ENST00000488774 CIAO1O76071 339 aa8.12□□□□□ -1.11
PTPRD-212ENST00000488774 ZNF280AP59817 542 aaPredicted RBP8.12□□□□□ -1.11
PTPRD-212ENST00000488774 TTLL5Q6EMB2 1281 aa8.12□□□□□ -1.11
PTPRD-212ENST00000488774 USP17L1Q7RTZ2 530 aa8.12□□□□□ -1.11
PTPRD-212ENST00000488774 KIAA0825Q8IV33 1275 aa8.12□□□□□ -1.11
PTPRD-212ENST00000488774 CDAN1Q8IWY9 1227 aa8.12□□□□□ -1.11
PTPRD-212ENST00000488774 RBM46Q8TBY0 533 aaKnown RBP8.12□□□□□ -1.11
PTPRD-212ENST00000488774 FBXW7Q969H0 707 aa8.12□□□□□ -1.11
PTPRD-212ENST00000488774 ZBED3Q96IU2 234 aaPredicted RBP8.12□□□□□ -1.11
PTPRD-212ENST00000488774 GLIS2Q9BZE0 524 aaPredicted RBP8.12□□□□□ -1.11
PTPRD-212ENST00000488774 NDUFB9Q9Y6M9 179 aa8.12□□□□□ -1.11
PTPRD-212ENST00000488774 SSC5DA1L4H1 1573 aa8.12□□□□□ -1.11
PTPRD-212ENST00000488774 BAZ2AQ9UIF9 1905 aaKnown RBP8.11□□□□□ -1.11
PTPRD-212ENST00000488774 FAM205AQ6ZU69 1335 aa8.11□□□□□ -1.11
PTPRD-212ENST00000488774 A0A1B0GUL7 405 aa8.11□□□□□ -1.11
PTPRD-212ENST00000488774 ADM5C9JUS6 153 aa8.11□□□□□ -1.11
PTPRD-212ENST00000488774 SMARCA5O60264 1052 aaPredicted RBP8.11□□□□□ -1.11
PTPRD-212ENST00000488774 HIBADHP31937 336 aaKnown RBP8.11□□□□□ -1.11
PTPRD-212ENST00000488774 KCNJ4P48050 445 aa8.11□□□□□ -1.11
PTPRD-212ENST00000488774 PDE3AQ14432 1141 aa8.11□□□□□ -1.11
PTPRD-212ENST00000488774 PUM3Q15397 648 aaKnown RBP8.11□□□□□ -1.11
PTPRD-212ENST00000488774 ATP2B3Q16720 1220 aa8.11□□□□□ -1.11
PTPRD-212ENST00000488774 STRIP1Q5VSL9 837 aa8.11□□□□□ -1.11
PTPRD-212ENST00000488774 PRAMEF18Q5VWM3 479 aa8.11□□□□□ -1.11
PTPRD-212ENST00000488774 CST9Q5W186 159 aa8.11□□□□□ -1.11
PTPRD-212ENST00000488774 CHADLQ6NUI6 762 aa8.11□□□□□ -1.11
PTPRD-212ENST00000488774 PODNQ7Z5L7 613 aa8.11□□□□□ -1.11
PTPRD-212ENST00000488774 DNAJC5GQ8N7S2 189 aa8.11□□□□□ -1.11
PTPRD-212ENST00000488774 EXOC6Q8TAG9 804 aa8.11□□□□□ -1.11
PTPRD-212ENST00000488774 EAF2Q96CJ1 260 aaPredicted RBP8.11□□□□□ -1.11
PTPRD-212ENST00000488774 DBNDD2Q9BQY9 259 aa8.11□□□□□ -1.11
PTPRD-212ENST00000488774 TMX4Q9H1E5 349 aaPredicted RBP8.11□□□□□ -1.11
PTPRD-212ENST00000488774 PGAP2Q9UHJ9 254 aa8.11□□□□□ -1.11
PTPRD-212ENST00000488774 FZD1Q9UP38 647 aa8.11□□□□□ -1.11
PTPRD-212ENST00000488774 NOP58Q9Y2X3 529 aaKnown RBP8.11□□□□□ -1.11
PTPRD-212ENST00000488774 SUPT16HQ9Y5B9 1047 aaKnown RBP8.11□□□□□ -1.11
PTPRD-212ENST00000488774 LAMB1P07942 1786 aa8.11□□□□□ -1.11
PTPRD-212ENST00000488774 MYH1P12882 1939 aa8.1□□□□□ -1.11
PTPRD-212ENST00000488774 APBB1O00213 710 aa8.1□□□□□ -1.11
PTPRD-212ENST00000488774 CHGBP05060 677 aa8.1□□□□□ -1.11
PTPRD-212ENST00000488774 SLURP2P0DP57 97 aa8.1□□□□□ -1.11
PTPRD-212ENST00000488774 IL15P40933 162 aaPredicted RBP8.1□□□□□ -1.11
PTPRD-212ENST00000488774 CHAF1AQ13111 956 aaPredicted RBP8.1□□□□□ -1.11
PTPRD-212ENST00000488774 RASGRF1Q13972 1273 aa8.1□□□□□ -1.11
PTPRD-212ENST00000488774 TNIP1Q15025 636 aa8.1□□□□□ -1.11
PTPRD-212ENST00000488774 CCDC102BQ68D86 513 aa8.1□□□□□ -1.11
PTPRD-212ENST00000488774 LDHDQ86WU2 507 aa8.1□□□□□ -1.11
PTPRD-212ENST00000488774 DPF2Q92785 391 aa8.1□□□□□ -1.11
PTPRD-212ENST00000488774 XAGE2Q96GT9 111 aa8.1□□□□□ -1.11
PTPRD-212ENST00000488774 PRMT6Q96LA8 375 aaPredicted RBP8.1□□□□□ -1.11
PTPRD-212ENST00000488774 CCDC8Q9H0W5 538 aaPredicted RBP8.1□□□□□ -1.11
PTPRD-212ENST00000488774 IL1RAPL2Q9NP60 686 aa8.1□□□□□ -1.11
PTPRD-212ENST00000488774 ADARB2Q9NS39 739 aaKnown RBP8.1□□□□□ -1.11
PTPRD-212ENST00000488774 DBNLQ9UJU6 430 aaKnown RBP8.1□□□□□ -1.11
PTPRD-212ENST00000488774 PHIPQ8WWQ0 1821 aa8.1□□□□□ -1.11
PTPRD-212ENST00000488774 ATAD5Q96QE3 1844 aa8.1□□□□□ -1.11
PTPRD-212ENST00000488774 DDX60LQ5H9U9 1706 aaKnown RBP8.09□□□□□ -1.11
PTPRD-212ENST00000488774 WNT10BO00744 389 aa8.09□□□□□ -1.11
PTPRD-212ENST00000488774 SURF6O75683 361 aaKnown RBP8.09□□□□□ -1.11
PTPRD-212ENST00000488774 HSPA6P17066 643 aa8.09□□□□□ -1.11
PTPRD-212ENST00000488774 PRDX5P30044 214 aa8.09□□□□□ -1.11
PTPRD-212ENST00000488774 MCAMP43121 646 aa8.09□□□□□ -1.11
PTPRD-212ENST00000488774 KIF4BQ2VIQ3 1234 aa8.09□□□□□ -1.11
PTPRD-212ENST00000488774 SLFNL1Q499Z3 407 aa8.09□□□□□ -1.11
PTPRD-212ENST00000488774 TNNI3KQ59H18 835 aa8.09□□□□□ -1.11
PTPRD-212ENST00000488774 TBC1D9Q6ZT07 1266 aa8.09□□□□□ -1.11
PTPRD-212ENST00000488774 MOB2Q70IA6 237 aa8.09□□□□□ -1.11
PTPRD-212ENST00000488774 USP48Q86UV5 1035 aa8.09□□□□□ -1.11
PTPRD-212ENST00000488774 CNTROBQ8N137 903 aa8.09□□□□□ -1.11
PTPRD-212ENST00000488774 AGBL3Q8NEM8 1001 aa8.09□□□□□ -1.11
PTPRD-212ENST00000488774 OTUD7AQ8TE49 926 aaPredicted RBP8.09□□□□□ -1.11
PTPRD-212ENST00000488774 LPIN2Q92539 896 aa8.09□□□□□ -1.11
PTPRD-212ENST00000488774 MYOZ2Q9NPC6 264 aa8.09□□□□□ -1.11
PTPRD-212ENST00000488774 CEP126Q9P2H0 1117 aa8.09□□□□□ -1.11
PTPRD-212ENST00000488774 DDX19BQ9UMR2 479 aa8.09□□□□□ -1.11
PTPRD-212ENST00000488774 CLEC11AQ9Y240 323 aa8.09□□□□□ -1.11
PTPRD-212ENST00000488774 FPGT-TNNI3KV9GXZ4 949 aa8.09□□□□□ -1.11
PTPRD-212ENST00000488774 THSD7BQ9C0I4 1608 aa8.09□□□□□ -1.11
PTPRD-212ENST00000488774 CENPFP49454 3210 aa8.08□□□□□ -1.12
PTPRD-212ENST00000488774 PTPRFP10586 1907 aa8.08□□□□□ -1.12
PTPRD-212ENST00000488774 IQCA1LA6NCM1 817 aa8.08□□□□□ -1.12
PTPRD-212ENST00000488774 G3V3G9 751 aa8.08□□□□□ -1.12
PTPRD-212ENST00000488774 USP17L8P0C7I0 530 aa8.08□□□□□ -1.12
PTPRD-212ENST00000488774 CACNB3P54284 484 aa8.08□□□□□ -1.12
PTPRD-212ENST00000488774 DIXDC1Q155Q3 683 aa8.08□□□□□ -1.12
PTPRD-212ENST00000488774 MFSD14BQ5SR56 506 aa8.08□□□□□ -1.12
PTPRD-212ENST00000488774 DCAF8Q5TAQ9 597 aa8.08□□□□□ -1.12
PTPRD-212ENST00000488774 ANGEL2Q5VTE6 544 aaKnown RBP8.08□□□□□ -1.12
PTPRD-212ENST00000488774 TSHZ3Q63HK5 1081 aa8.08□□□□□ -1.12
PTPRD-212ENST00000488774 USP50Q70EL3 339 aaPredicted RBP8.08□□□□□ -1.12
PTPRD-212ENST00000488774 ZNF804AQ7Z570 1209 aa8.08□□□□□ -1.12
PTPRD-212ENST00000488774 C16orf71Q8IYS4 520 aaPredicted RBP8.08□□□□□ -1.12
PTPRD-212ENST00000488774 SMC1BQ8NDV3 1235 aa8.08□□□□□ -1.12
PTPRD-212ENST00000488774 EDC3Q96F86 508 aaKnown RBP8.08□□□□□ -1.12
PTPRD-212ENST00000488774 SNRKQ9NRH2 765 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms