RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 CHMP4BP1P59074 171 aa18.64■□□□□ 0.57
MCF2L-229ENST00000488765 TOB2Q14106 344 aaPredicted RBP18.64■□□□□ 0.57
MCF2L-229ENST00000488765 AXDND1Q5T1B0 1012 aaPredicted RBP18.64■□□□□ 0.57
MCF2L-229ENST00000488765 ZNF622Q969S3 477 aaKnown RBP eCLIP18.64■□□□□ 0.57
MCF2L-229ENST00000488765 EDC3Q96F86 508 aaKnown RBP18.64■□□□□ 0.57
MCF2L-229ENST00000488765 SAMM50Q9Y512 469 aa18.64■□□□□ 0.57
MCF2L-229ENST00000488765 MAP3K9P80192 1104 aa18.64■□□□□ 0.57
MCF2L-229ENST00000488765 FLIIQ13045 1269 aa18.64■□□□□ 0.57
MCF2L-229ENST00000488765 FKBP15Q5T1M5 1219 aa18.64■□□□□ 0.57
MCF2L-229ENST00000488765 FANCLQ9NW38 375 aa18.64■□□□□ 0.57
MCF2L-229ENST00000488765 CFAP45Q9UL16 551 aa18.64■□□□□ 0.57
MCF2L-229ENST00000488765 PA2G4Q9UQ80 394 aaKnown RBP18.64■□□□□ 0.57
MCF2L-229ENST00000488765 SLC27A2O14975 620 aa18.63■□□□□ 0.57
MCF2L-229ENST00000488765 HNRNPH1P31943 449 aaKnown RBP18.63■□□□□ 0.57
MCF2L-229ENST00000488765 BEND6Q5SZJ8 279 aaPredicted RBP18.63■□□□□ 0.57
MCF2L-229ENST00000488765 USP44Q9H0E7 712 aa18.63■□□□□ 0.57
MCF2L-229ENST00000488765 DONSONQ9NYP3 566 aa18.63■□□□□ 0.57
MCF2L-229ENST00000488765 MRFAP1Q9Y605 127 aa18.63■□□□□ 0.57
MCF2L-229ENST00000488765 ATP8B1O43520 1251 aa18.62■□□□□ 0.57
MCF2L-229ENST00000488765 NECTIN1Q15223 517 aa18.62■□□□□ 0.57
MCF2L-229ENST00000488765 HDXQ7Z353 690 aa18.62■□□□□ 0.57
MCF2L-229ENST00000488765 CPSF1Q10570 1443 aaKnown RBP18.62■□□□□ 0.57
MCF2L-229ENST00000488765 CHL1O00533 1208 aa18.62■□□□□ 0.57
MCF2L-229ENST00000488765 TOP1P11387 765 aaKnown RBP18.62■□□□□ 0.57
MCF2L-229ENST00000488765 VSNL1P62760 191 aa18.62■□□□□ 0.57
MCF2L-229ENST00000488765 NMIQ13287 307 aaPredicted RBP18.62■□□□□ 0.57
MCF2L-229ENST00000488765 CHST3Q7LGC8 479 aa18.62■□□□□ 0.57
MCF2L-229ENST00000488765 RAB11FIP4Q86YS3 637 aa18.62■□□□□ 0.57
MCF2L-229ENST00000488765 LRRC59Q96AG4 307 aaKnown RBP18.62■□□□□ 0.57
MCF2L-229ENST00000488765 CARD10Q9BWT7 1032 aa18.62■□□□□ 0.57
MCF2L-229ENST00000488765 PSD3Q9NYI0 1048 aa18.62■□□□□ 0.57
MCF2L-229ENST00000488765 IMPACTQ9P2X3 320 aa18.62■□□□□ 0.57
MCF2L-229ENST00000488765 MAP2P11137 1827 aaKnown RBP18.62■□□□□ 0.57
MCF2L-229ENST00000488765 ANXA1P04083 346 aa18.62■□□□□ 0.57
MCF2L-229ENST00000488765 RSRC2Q7L4I2 434 aaKnown RBP18.62■□□□□ 0.57
MCF2L-229ENST00000488765 DDX17Q92841 729 aaKnown RBP18.62■□□□□ 0.57
MCF2L-229ENST00000488765 ANKZF1Q9H8Y5 726 aa18.62■□□□□ 0.57
MCF2L-229ENST00000488765 GJB4Q9NTQ9 266 aa18.62■□□□□ 0.57
MCF2L-229ENST00000488765 TTC41PQ6P2S7 1318 aa18.61■□□□□ 0.57
MCF2L-229ENST00000488765 ADAMTS13Q76LX8 1427 aa18.61■□□□□ 0.57
MCF2L-229ENST00000488765 PTPRUQ92729 1446 aa18.61■□□□□ 0.57
MCF2L-229ENST00000488765 LRRIQ3A6PVS8 624 aaPredicted RBP18.61■□□□□ 0.57
MCF2L-229ENST00000488765 EXOC5O00471 708 aa18.61■□□□□ 0.57
MCF2L-229ENST00000488765 CAVIN2O95810 425 aa18.61■□□□□ 0.57
MCF2L-229ENST00000488765 NBPF7P0C2Y1 421 aaPredicted RBP18.61■□□□□ 0.57
MCF2L-229ENST00000488765 CASP8Q14790 479 aa18.61■□□□□ 0.57
MCF2L-229ENST00000488765 RABGGTAQ92696 567 aa18.61■□□□□ 0.57
MCF2L-229ENST00000488765 MAP2K7O14733 419 aa18.61■□□□□ 0.57
MCF2L-229ENST00000488765 FAM160A1Q05DH4 1040 aa18.61■□□□□ 0.57
MCF2L-229ENST00000488765 IQUBQ8NA54 791 aa18.61■□□□□ 0.57
MCF2L-229ENST00000488765 ORAI2Q96SN7 254 aa18.61■□□□□ 0.57
MCF2L-229ENST00000488765 CCDC8Q9H0W5 538 aaPredicted RBP18.61■□□□□ 0.57
MCF2L-229ENST00000488765 CENPHQ9H3R5 247 aa18.61■□□□□ 0.57
MCF2L-229ENST00000488765 RPAINQ86UA6 219 aa18.61■□□□□ 0.57
MCF2L-229ENST00000488765 BOLA2Q9H3K6 86 aa18.61■□□□□ 0.57
MCF2L-229ENST00000488765 PHAXQ9H814 394 aaKnown RBP18.61■□□□□ 0.57
MCF2L-229ENST00000488765 A1BGP04217 495 aa18.6■□□□□ 0.57
MCF2L-229ENST00000488765 TMED8Q6PL24 325 aaPredicted RBP18.6■□□□□ 0.57
MCF2L-229ENST00000488765 SAMD1Q6SPF0 538 aaPredicted RBP18.6■□□□□ 0.57
MCF2L-229ENST00000488765 PCDHA7Q9UN72 937 aa18.6■□□□□ 0.57
MCF2L-229ENST00000488765 KIF24Q5T7B8 1368 aa18.6■□□□□ 0.57
MCF2L-229ENST00000488765 PLEKHG3A1L390 1219 aa18.6■□□□□ 0.57
MCF2L-229ENST00000488765 CCDC151A5D8V7 595 aa18.6■□□□□ 0.57
MCF2L-229ENST00000488765 CD248Q9HCU0 757 aa18.6■□□□□ 0.57
MCF2L-229ENST00000488765 RNF40O75150 1001 aa18.59■□□□□ 0.57
MCF2L-229ENST00000488765 AKAP17AQ02040 695 aaKnown RBP18.59■□□□□ 0.57
MCF2L-229ENST00000488765 KCNV1Q6PIU1 500 aa18.59■□□□□ 0.57
MCF2L-229ENST00000488765 CPLX2Q6PUV4 134 aaKnown RBP18.59■□□□□ 0.57
MCF2L-229ENST00000488765 PRPF38AQ8NAV1 312 aaKnown RBP18.59■□□□□ 0.57
MCF2L-229ENST00000488765 RUFY2Q8WXA3 655 aa18.59■□□□□ 0.57
MCF2L-229ENST00000488765 A0A0D9SFI3 127 aa18.59■□□□□ 0.57
MCF2L-229ENST00000488765 H0YHG0 523 aa18.59■□□□□ 0.57
MCF2L-229ENST00000488765 MYO1FO00160 1098 aa18.59■□□□□ 0.57
MCF2L-229ENST00000488765 HAP1P54257 671 aaPredicted RBP18.59■□□□□ 0.57
MCF2L-229ENST00000488765 Q6ZUG5 572 aa18.59■□□□□ 0.57
MCF2L-229ENST00000488765 KIAA1468Q9P260 1216 aa18.59■□□□□ 0.57
MCF2L-229ENST00000488765 LONRF3Q496Y0 759 aa18.59■□□□□ 0.57
MCF2L-229ENST00000488765 FAM43BQ6ZT52 329 aaPredicted RBP18.59■□□□□ 0.57
MCF2L-229ENST00000488765 EFCAB13Q8IY85 973 aa18.59■□□□□ 0.57
MCF2L-229ENST00000488765 GSPT2Q8IYD1 628 aaKnown RBP18.59■□□□□ 0.57
MCF2L-229ENST00000488765 MRPL44Q9H9J2 332 aaKnown RBP18.59■□□□□ 0.57
MCF2L-229ENST00000488765 TBX22Q9Y458 520 aa18.59■□□□□ 0.57
MCF2L-229ENST00000488765 ZSCAN12O43309 604 aa18.58■□□□□ 0.57
MCF2L-229ENST00000488765 SLC3A2P08195 630 aaKnown RBP18.58■□□□□ 0.57
MCF2L-229ENST00000488765 MARCKSP29966 332 aaPredicted RBP18.58■□□□□ 0.57
MCF2L-229ENST00000488765 ADD1P35611 737 aaKnown RBP18.58■□□□□ 0.57
MCF2L-229ENST00000488765 ZC3H6P61129 1189 aaKnown RBP18.58■□□□□ 0.57
MCF2L-229ENST00000488765 KIF4BQ2VIQ3 1234 aa18.58■□□□□ 0.57
MCF2L-229ENST00000488765 ANKLE2Q86XL3 938 aa18.58■□□□□ 0.57
MCF2L-229ENST00000488765 BAG1Q99933 345 aaPredicted RBP18.58■□□□□ 0.57
MCF2L-229ENST00000488765 CTAGE5O15320 804 aa18.58■□□□□ 0.56
MCF2L-229ENST00000488765 EIF3JO75822 258 aaKnown RBP18.58■□□□□ 0.56
MCF2L-229ENST00000488765 ABL1P00519 1130 aa18.58■□□□□ 0.56
MCF2L-229ENST00000488765 ZNF589Q86UQ0 364 aaPredicted RBP18.58■□□□□ 0.56
MCF2L-229ENST00000488765 SPATA31D1Q6ZQQ2 1576 aa18.58■□□□□ 0.56
MCF2L-229ENST00000488765 ENGASEQ8NFI3 743 aa18.57■□□□□ 0.56
MCF2L-229ENST00000488765 L1RE1Q9UN81 338 aa18.57■□□□□ 0.56
MCF2L-229ENST00000488765 ATP7BP35670 1465 aa18.57■□□□□ 0.56
MCF2L-229ENST00000488765 RPS6KB1P23443 525 aa18.57■□□□□ 0.56
MCF2L-229ENST00000488765 GSCP56915 257 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms