RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 MS4A1P11836 297 aa29.42■■■□□ 2.3
RHBDD3-205ENST00000488106 DNAJC5GQ8N7S2 189 aa29.42■■■□□ 2.3
RHBDD3-205ENST00000488106 ZBTB7BO15156 539 aaPredicted RBP29.41■■■□□ 2.3
RHBDD3-205ENST00000488106 ATP2B3Q16720 1220 aa29.41■■■□□ 2.3
RHBDD3-205ENST00000488106 LPIN2Q92539 896 aa29.41■■■□□ 2.3
RHBDD3-205ENST00000488106 SASH1O94885 1247 aa29.4■■■□□ 2.3
RHBDD3-205ENST00000488106 BCAMP50895 628 aa29.4■■■□□ 2.3
RHBDD3-205ENST00000488106 FBXO33Q7Z6M2 555 aa29.4■■■□□ 2.3
RHBDD3-205ENST00000488106 DCPSQ96C86 337 aaKnown RBP29.4■■■□□ 2.3
RHBDD3-205ENST00000488106 F8W031 263 aaPredicted RBP29.39■■■□□ 2.3
RHBDD3-205ENST00000488106 FRAT2O75474 233 aaPredicted RBP29.39■■■□□ 2.3
RHBDD3-205ENST00000488106 SCARF1Q14162 830 aa29.39■■■□□ 2.3
RHBDD3-205ENST00000488106 CDC37L1Q7L3B6 337 aa29.39■■■□□ 2.3
RHBDD3-205ENST00000488106 KRT26Q7Z3Y9 468 aa29.39■■■□□ 2.3
RHBDD3-205ENST00000488106 USP48Q86UV5 1035 aa29.39■■■□□ 2.3
RHBDD3-205ENST00000488106 KLRG1Q96E93 195 aa29.39■■■□□ 2.3
RHBDD3-205ENST00000488106 HDAC9Q9UKV0 1011 aa29.39■■■□□ 2.3
RHBDD3-205ENST00000488106 FAM205AQ6ZU69 1335 aa29.39■■■□□ 2.3
RHBDD3-205ENST00000488106 CHAF1AQ13111 956 aaPredicted RBP29.38■■■□□ 2.29
RHBDD3-205ENST00000488106 ADM5C9JUS6 153 aa29.37■■■□□ 2.29
RHBDD3-205ENST00000488106 MFSD14BQ5SR56 506 aa29.37■■■□□ 2.29
RHBDD3-205ENST00000488106 ANGEL2Q5VTE6 544 aaKnown RBP29.37■■■□□ 2.29
RHBDD3-205ENST00000488106 ZNF408Q9H9D4 720 aa29.37■■■□□ 2.29
RHBDD3-205ENST00000488106 MKRN1Q9UHC7 482 aaKnown RBP29.37■■■□□ 2.29
RHBDD3-205ENST00000488106 COG6Q9Y2V7 657 aa29.37■■■□□ 2.29
RHBDD3-205ENST00000488106 FKBP1AP62942 108 aaKnown RBP29.36■■■□□ 2.29
RHBDD3-205ENST00000488106 MVPQ14764 893 aaKnown RBP29.36■■■□□ 2.29
RHBDD3-205ENST00000488106 NBPF9Q3BBW0 867 aa29.36■■■□□ 2.29
RHBDD3-205ENST00000488106 DLK2Q6UY11 383 aa29.36■■■□□ 2.29
RHBDD3-205ENST00000488106 TFCP2Q12800 502 aa29.35■■■□□ 2.29
RHBDD3-205ENST00000488106 ABT1Q9ULW3 272 aaKnown RBP29.35■■■□□ 2.29
RHBDD3-205ENST00000488106 COL1A1P02452 1464 aaPredicted RBP29.35■■■□□ 2.29
RHBDD3-205ENST00000488106 CELF2O95319 508 aaKnown RBP29.34■■■□□ 2.29
RHBDD3-205ENST00000488106 ATP8B2P98198 1209 aa29.34■■■□□ 2.29
RHBDD3-205ENST00000488106 SULF1Q8IWU6 871 aa29.34■■■□□ 2.29
RHBDD3-205ENST00000488106 WNT10BO00744 389 aa29.33■■■□□ 2.29
RHBDD3-205ENST00000488106 MMP14P50281 582 aa29.33■■■□□ 2.29
RHBDD3-205ENST00000488106 POLA2Q14181 598 aa29.33■■■□□ 2.29
RHBDD3-205ENST00000488106 CST9Q5W186 159 aa29.33■■■□□ 2.29
RHBDD3-205ENST00000488106 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.33■■■□□ 2.29
RHBDD3-205ENST00000488106 SSH3Q8TE77 659 aa29.33■■■□□ 2.29
RHBDD3-205ENST00000488106 DDX19BQ9UMR2 479 aa29.33■■■□□ 2.29
RHBDD3-205ENST00000488106 MYH2Q9UKX2 1941 aa29.32■■■□□ 2.28
RHBDD3-205ENST00000488106 ADORA1P30542 326 aa29.32■■■□□ 2.28
RHBDD3-205ENST00000488106 G3BP1Q13283 466 aaKnown RBP eCLIP29.32■■■□□ 2.28
RHBDD3-205ENST00000488106 C20orf194Q5TEA3 1177 aa29.32■■■□□ 2.28
RHBDD3-205ENST00000488106 SCAF8Q9UPN6 1271 aaKnown RBP29.32■■■□□ 2.28
RHBDD3-205ENST00000488106 CNTNAP1P78357 1384 aa29.31■■■□□ 2.28
RHBDD3-205ENST00000488106 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.31■■■□□ 2.28
RHBDD3-205ENST00000488106 PITPNM2Q9BZ72 1349 aa29.3■■■□□ 2.28
RHBDD3-205ENST00000488106 OS9Q13438 667 aaPredicted RBP29.3■■■□□ 2.28
RHBDD3-205ENST00000488106 DLGAP5Q15398 846 aa29.3■■■□□ 2.28
RHBDD3-205ENST00000488106 CEP85Q6P2H3 762 aa29.3■■■□□ 2.28
RHBDD3-205ENST00000488106 TTF2Q9UNY4 1162 aaKnown RBP29.3■■■□□ 2.28
RHBDD3-205ENST00000488106 PCDHAC2Q9Y5I4 1007 aa29.3■■■□□ 2.28
RHBDD3-205ENST00000488106 A0A1B0GUL7 405 aa29.29■■■□□ 2.28
RHBDD3-205ENST00000488106 PHKA1P46020 1223 aa29.29■■■□□ 2.28
RHBDD3-205ENST00000488106 AKAP2Q9Y2D5 859 aa29.29■■■□□ 2.28
RHBDD3-205ENST00000488106 RBM5P52756 815 aaKnown RBP eCLIP29.28■■■□□ 2.28
RHBDD3-205ENST00000488106 TIMM10P62072 90 aa29.28■■■□□ 2.28
RHBDD3-205ENST00000488106 CFAP100Q494V2 611 aa29.28■■■□□ 2.28
RHBDD3-205ENST00000488106 TBC1D22AQ8WUA7 517 aa29.28■■■□□ 2.28
RHBDD3-205ENST00000488106 MYO5AQ9Y4I1 1855 aaKnown RBP29.27■■■□□ 2.28
RHBDD3-205ENST00000488106 SURF6O75683 361 aaKnown RBP29.27■■■□□ 2.28
RHBDD3-205ENST00000488106 GRIK5Q16478 980 aa29.27■■■□□ 2.28
RHBDD3-205ENST00000488106 ZBED3Q96IU2 234 aaPredicted RBP29.27■■■□□ 2.28
RHBDD3-205ENST00000488106 GNL3LQ9NVN8 582 aaKnown RBP29.27■■■□□ 2.28
RHBDD3-205ENST00000488106 AKAP11Q9UKA4 1901 aa29.26■■■□□ 2.27
RHBDD3-205ENST00000488106 PDE3AQ14432 1141 aa29.26■■■□□ 2.27
RHBDD3-205ENST00000488106 CDCA5Q96FF9 252 aa29.26■■■□□ 2.27
RHBDD3-205ENST00000488106 XAGE2Q96GT9 111 aa29.26■■■□□ 2.27
RHBDD3-205ENST00000488106 NEUROD6Q96NK8 337 aa29.26■■■□□ 2.27
RHBDD3-205ENST00000488106 PAPPA2Q9BXP8 1791 aa29.26■■■□□ 2.27
RHBDD3-205ENST00000488106 THSD7BQ9C0I4 1608 aa29.25■■■□□ 2.27
RHBDD3-205ENST00000488106 RASSF10A6NK89 507 aa29.25■■■□□ 2.27
RHBDD3-205ENST00000488106 CCDC102BQ68D86 513 aa29.25■■■□□ 2.27
RHBDD3-205ENST00000488106 PAXIP1Q6ZW49 1069 aaPredicted RBP29.25■■■□□ 2.27
RHBDD3-205ENST00000488106 MTMR14Q8NCE2 650 aa29.25■■■□□ 2.27
RHBDD3-205ENST00000488106 TLL2Q9Y6L7 1015 aa29.25■■■□□ 2.27
RHBDD3-205ENST00000488106 AK9Q5TCS8 1911 aa29.24■■■□□ 2.27
RHBDD3-205ENST00000488106 SPDYE2BA6NHP3 402 aa29.24■■■□□ 2.27
RHBDD3-205ENST00000488106 SPDYE6P0CI01 402 aa29.24■■■□□ 2.27
RHBDD3-205ENST00000488106 DEFB115Q30KQ5 88 aa29.24■■■□□ 2.27
RHBDD3-205ENST00000488106 ZBTB40Q9NUA8 1239 aa29.24■■■□□ 2.27
RHBDD3-205ENST00000488106 AOX1Q06278 1338 aa29.23■■■□□ 2.27
RHBDD3-205ENST00000488106 APOBEC3FQ8IUX4 373 aaKnown RBP29.23■■■□□ 2.27
RHBDD3-205ENST00000488106 JMYQ8N9B5 988 aa29.23■■■□□ 2.27
RHBDD3-205ENST00000488106 CLRN2A0PK11 232 aa29.22■■■□□ 2.27
RHBDD3-205ENST00000488106 MYO1BO43795 1136 aa29.22■■■□□ 2.27
RHBDD3-205ENST00000488106 VEGFBP49765 207 aa29.22■■■□□ 2.27
RHBDD3-205ENST00000488106 WDR66Q8TBY9 1149 aa29.22■■■□□ 2.27
RHBDD3-205ENST00000488106 PRMT6Q96LA8 375 aaPredicted RBP29.22■■■□□ 2.27
RHBDD3-205ENST00000488106 SERPINA10Q9UK55 444 aa29.22■■■□□ 2.27
RHBDD3-205ENST00000488106 CRKP46108 304 aa29.21■■■□□ 2.27
RHBDD3-205ENST00000488106 GRM1Q13255 1194 aa29.21■■■□□ 2.27
RHBDD3-205ENST00000488106 GORABQ5T7V8 394 aa29.21■■■□□ 2.27
RHBDD3-205ENST00000488106 PRAMEF18Q5VWM3 479 aa29.21■■■□□ 2.27
RHBDD3-205ENST00000488106 SAPCD2Q86UD0 394 aa29.21■■■□□ 2.27
RHBDD3-205ENST00000488106 CHMP4BQ9H444 224 aaKnown RBP29.21■■■□□ 2.27
RHBDD3-205ENST00000488106 GBA2Q9HCG7 927 aaPredicted RBP29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms