RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 GMPR2Q9P2T1 348 aaKnown RBP10.11□□□□□ -0.79
NECTIN3-209ENST00000488016 TLL2Q9Y6L7 1015 aa10.11□□□□□ -0.79
NECTIN3-209ENST00000488016 CARMIL3Q8ND23 1372 aa10.11□□□□□ -0.79
NECTIN3-209ENST00000488016 AFDNP55196 1824 aaKnown RBP10.1□□□□□ -0.79
NECTIN3-209ENST00000488016 ATP10DQ9P241 1426 aa10.1□□□□□ -0.79
NECTIN3-209ENST00000488016 POLRMTO00411 1230 aaKnown RBP10.1□□□□□ -0.79
NECTIN3-209ENST00000488016 GNAI1P63096 354 aa10.1□□□□□ -0.79
NECTIN3-209ENST00000488016 CCDC27Q2M243 656 aa10.1□□□□□ -0.79
NECTIN3-209ENST00000488016 COL13A1Q5TAT6 717 aaPredicted RBP10.1□□□□□ -0.79
NECTIN3-209ENST00000488016 DUSP27Q5VZP5 1158 aa10.1□□□□□ -0.79
NECTIN3-209ENST00000488016 LRP10Q7Z4F1 713 aa10.1□□□□□ -0.79
NECTIN3-209ENST00000488016 ZNF775Q96BV0 537 aaPredicted RBP10.1□□□□□ -0.79
NECTIN3-209ENST00000488016 ATP13A2Q9NQ11 1180 aa10.1□□□□□ -0.79
NECTIN3-209ENST00000488016 CHPF2Q9P2E5 772 aa10.1□□□□□ -0.79
NECTIN3-209ENST00000488016 KIAA1551Q9HCM1 1747 aa10.1□□□□□ -0.79
NECTIN3-209ENST00000488016 FANCIQ9NVI1 1328 aa10.09□□□□□ -0.79
NECTIN3-209ENST00000488016 C10orf71Q711Q0 1435 aa10.09□□□□□ -0.79
NECTIN3-209ENST00000488016 N4BP2Q86UW6 1770 aaPredicted RBP10.09□□□□□ -0.79
NECTIN3-209ENST00000488016 FAM177BA6PVY3 158 aa10.09□□□□□ -0.79
NECTIN3-209ENST00000488016 HMGB2P26583 209 aaKnown RBP10.09□□□□□ -0.79
NECTIN3-209ENST00000488016 TM4SF1P30408 202 aa10.09□□□□□ -0.79
NECTIN3-209ENST00000488016 NLGN1Q8N2Q7 840 aa10.09□□□□□ -0.79
NECTIN3-209ENST00000488016 BABAM1Q9NWV8 329 aa10.09□□□□□ -0.79
NECTIN3-209ENST00000488016 PARP3Q9Y6F1 533 aa10.09□□□□□ -0.79
NECTIN3-209ENST00000488016 A0A087WZG4 1122 aa10.08□□□□□ -0.8
NECTIN3-209ENST00000488016 AIMP1Q12904 312 aaKnown RBP10.08□□□□□ -0.8
NECTIN3-209ENST00000488016 HDGFL1Q5TGJ6 251 aa10.08□□□□□ -0.8
NECTIN3-209ENST00000488016 FOXJ1Q92949 421 aa10.08□□□□□ -0.8
NECTIN3-209ENST00000488016 PXDNLA1KZ92 1463 aa10.07□□□□□ -0.8
NECTIN3-209ENST00000488016 SERPINB2P05120 415 aa10.07□□□□□ -0.8
NECTIN3-209ENST00000488016 GPTP24298 496 aa10.07□□□□□ -0.8
NECTIN3-209ENST00000488016 CHRNA5P30532 468 aa10.07□□□□□ -0.8
NECTIN3-209ENST00000488016 BPHLQ86WA6 291 aaPredicted RBP10.07□□□□□ -0.8
NECTIN3-209ENST00000488016 MPNDQ8N594 471 aa10.07□□□□□ -0.8
NECTIN3-209ENST00000488016 DNAJC5GQ8N7S2 189 aa10.07□□□□□ -0.8
NECTIN3-209ENST00000488016 XAGE3Q8WTP9 111 aa10.07□□□□□ -0.8
NECTIN3-209ENST00000488016 SENP2Q9HC62 589 aa10.07□□□□□ -0.8
NECTIN3-209ENST00000488016 NRXN2Q9P2S2 1712 aa10.07□□□□□ -0.8
NECTIN3-209ENST00000488016 ZNF521Q96K83 1311 aa10.07□□□□□ -0.8
NECTIN3-209ENST00000488016 KIF13BQ9NQT8 1826 aa10.06□□□□□ -0.8
NECTIN3-209ENST00000488016 A0A0G2JLW4 131 aa10.06□□□□□ -0.8
NECTIN3-209ENST00000488016 DPEP1P16444 411 aa10.06□□□□□ -0.8
NECTIN3-209ENST00000488016 CALD1Q05682 793 aaKnown RBP10.06□□□□□ -0.8
NECTIN3-209ENST00000488016 EXOSC9Q06265 439 aaKnown RBP10.06□□□□□ -0.8
NECTIN3-209ENST00000488016 COPS6Q7L5N1 327 aa10.06□□□□□ -0.8
NECTIN3-209ENST00000488016 NPM2Q86SE8 214 aaKnown RBP10.06□□□□□ -0.8
NECTIN3-209ENST00000488016 PHAXQ9H814 394 aaKnown RBP10.06□□□□□ -0.8
NECTIN3-209ENST00000488016 ANKRD31Q8N7Z5 1873 aa10.06□□□□□ -0.8
NECTIN3-209ENST00000488016 MAP3K15Q6ZN16 1313 aa10.06□□□□□ -0.8
NECTIN3-209ENST00000488016 UBN2Q6ZU65 1347 aa10.06□□□□□ -0.8
NECTIN3-209ENST00000488016 NUP98P52948 1817 aa10.05□□□□□ -0.8
NECTIN3-209ENST00000488016 CAPN5O15484 640 aaPredicted RBP10.05□□□□□ -0.8
NECTIN3-209ENST00000488016 ARID5BQ14865 1188 aa10.05□□□□□ -0.8
NECTIN3-209ENST00000488016 PRR5LQ6MZQ0 368 aa10.05□□□□□ -0.8
NECTIN3-209ENST00000488016 KIF6Q6ZMV9 814 aa10.05□□□□□ -0.8
NECTIN3-209ENST00000488016 WDR63Q8IWG1 891 aa10.05□□□□□ -0.8
NECTIN3-209ENST00000488016 PROCA1Q8NCQ7 364 aaPredicted RBP10.05□□□□□ -0.8
NECTIN3-209ENST00000488016 NIP7Q9Y221 180 aaKnown RBP eCLIP10.05□□□□□ -0.8
NECTIN3-209ENST00000488016 CD2APQ9Y5K6 639 aa10.05□□□□□ -0.8
NECTIN3-209ENST00000488016 IL16Q14005 1332 aa10.05□□□□□ -0.8
NECTIN3-209ENST00000488016 COL11A2P13942 1736 aaPredicted RBP10.04□□□□□ -0.8
NECTIN3-209ENST00000488016 TNRC6CQ9HCJ0 1690 aaKnown RBP10.04□□□□□ -0.8
NECTIN3-209ENST00000488016 GRIN3BO60391 1043 aa10.04□□□□□ -0.8
NECTIN3-209ENST00000488016 CTDSPL2Q05D32 466 aa10.04□□□□□ -0.8
NECTIN3-209ENST00000488016 NNTQ13423 1086 aa10.04□□□□□ -0.8
NECTIN3-209ENST00000488016 TWISTNBQ3B726 338 aaPredicted RBP10.04□□□□□ -0.8
NECTIN3-209ENST00000488016 G2E3Q7L622 706 aa10.04□□□□□ -0.8
NECTIN3-209ENST00000488016 KIFC2Q96AC6 838 aa10.04□□□□□ -0.8
NECTIN3-209ENST00000488016 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.04□□□□□ -0.8
NECTIN3-209ENST00000488016 DDX21Q9NR30 783 aaKnown RBP eCLIP10.04□□□□□ -0.8
NECTIN3-209ENST00000488016 ERBB4Q15303 1308 aa10.04□□□□□ -0.8
NECTIN3-209ENST00000488016 ABCC12Q96J65 1359 aa10.03□□□□□ -0.8
NECTIN3-209ENST00000488016 HOXB7P09629 217 aa10.03□□□□□ -0.8
NECTIN3-209ENST00000488016 KCNA3P22001 575 aa10.03□□□□□ -0.8
NECTIN3-209ENST00000488016 SLC51AQ86UW1 340 aa10.03□□□□□ -0.8
NECTIN3-209ENST00000488016 SETDB2Q96T68 719 aa10.03□□□□□ -0.8
NECTIN3-209ENST00000488016 GTF3C3Q9Y5Q9 886 aa10.03□□□□□ -0.8
NECTIN3-209ENST00000488016 ARFGEF2Q9Y6D5 1785 aa10.02□□□□□ -0.81
NECTIN3-209ENST00000488016 ADH1CP00326 375 aa10.02□□□□□ -0.81
NECTIN3-209ENST00000488016 PRELPP51888 382 aa10.02□□□□□ -0.81
NECTIN3-209ENST00000488016 PPP2R2DQ66LE6 453 aa10.02□□□□□ -0.81
NECTIN3-209ENST00000488016 NBPF5PQ86XG9 351 aaPredicted RBP10.02□□□□□ -0.81
NECTIN3-209ENST00000488016 SYNE4Q8N205 404 aa10.02□□□□□ -0.81
NECTIN3-209ENST00000488016 CNBD1Q8NA66 436 aa10.02□□□□□ -0.81
NECTIN3-209ENST00000488016 GPKOWQ92917 476 aaPredicted RBP eCLIP10.02□□□□□ -0.81
NECTIN3-209ENST00000488016 TRIM47Q96LD4 638 aa10.02□□□□□ -0.81
NECTIN3-209ENST00000488016 ZNF652Q9Y2D9 606 aa10.02□□□□□ -0.81
NECTIN3-209ENST00000488016 BRCA1P38398 1863 aaKnown RBP10.02□□□□□ -0.81
NECTIN3-209ENST00000488016 ERVV-1B6SEH8 477 aa10.01□□□□□ -0.81
NECTIN3-209ENST00000488016 ATP5J2-PTCD1G3V325 749 aa10.01□□□□□ -0.81
NECTIN3-209ENST00000488016 VAMP4O75379 141 aa10.01□□□□□ -0.81
NECTIN3-209ENST00000488016 AP1G2O75843 785 aa10.01□□□□□ -0.81
NECTIN3-209ENST00000488016 HTRA3P83110 453 aa10.01□□□□□ -0.81
NECTIN3-209ENST00000488016 ERFEQ4G0M1 354 aa10.01□□□□□ -0.81
NECTIN3-209ENST00000488016 SUSD4Q5VX71 490 aa10.01□□□□□ -0.81
NECTIN3-209ENST00000488016 CLEC4GQ6UXB4 293 aa10.01□□□□□ -0.81
NECTIN3-209ENST00000488016 C2CD5Q86YS7 1000 aa10.01□□□□□ -0.81
NECTIN3-209ENST00000488016 ZNF34Q8IZ26 560 aa10.01□□□□□ -0.81
NECTIN3-209ENST00000488016 CDK15Q96Q40 435 aa10.01□□□□□ -0.81
NECTIN3-209ENST00000488016 DBF4Q9UBU7 674 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms