RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 CIAPIN1Q6FI81 312 aa17.13■□□□□ 0.33
NUP188-207ENST00000487952 USP17L1Q7RTZ2 530 aa17.13■□□□□ 0.33
NUP188-207ENST00000487952 PLEKHM2Q8IWE5 1019 aa17.13■□□□□ 0.33
NUP188-207ENST00000487952 SPATA5Q8NB90 893 aa17.13■□□□□ 0.33
NUP188-207ENST00000487952 WDR66Q8TBY9 1149 aa17.13■□□□□ 0.33
NUP188-207ENST00000487952 DNAJC2Q99543 621 aaKnown RBP17.13■□□□□ 0.33
NUP188-207ENST00000487952 SNRKQ9NRH2 765 aa17.13■□□□□ 0.33
NUP188-207ENST00000487952 HMG20BQ9P0W2 317 aa17.13■□□□□ 0.33
NUP188-207ENST00000487952 STAP2Q9UGK3 403 aa17.13■□□□□ 0.33
NUP188-207ENST00000487952 JAG2Q9Y219 1238 aa17.13■□□□□ 0.33
NUP188-207ENST00000487952 AOX1Q06278 1338 aa17.13■□□□□ 0.33
NUP188-207ENST00000487952 COL4A5P29400 1685 aa17.13■□□□□ 0.33
NUP188-207ENST00000487952 FZD9O00144 591 aa17.12■□□□□ 0.33
NUP188-207ENST00000487952 ZBTB22O15209 634 aa17.12■□□□□ 0.33
NUP188-207ENST00000487952 RGS3P49796 1198 aa17.12■□□□□ 0.33
NUP188-207ENST00000487952 SCARF1Q14162 830 aa17.12■□□□□ 0.33
NUP188-207ENST00000487952 STRIP1Q5VSL9 837 aa17.12■□□□□ 0.33
NUP188-207ENST00000487952 TBC1D22AQ8WUA7 517 aa17.12■□□□□ 0.33
NUP188-207ENST00000487952 FAM205AQ6ZU69 1335 aa17.12■□□□□ 0.33
NUP188-207ENST00000487952 ZC3H4Q9UPT8 1303 aaKnown RBP17.12■□□□□ 0.33
NUP188-207ENST00000487952 ZAP70P43403 619 aa17.11■□□□□ 0.33
NUP188-207ENST00000487952 CXCL9Q07325 125 aa17.11■□□□□ 0.33
NUP188-207ENST00000487952 ZGPATQ8N5A5 531 aaKnown RBP17.11■□□□□ 0.33
NUP188-207ENST00000487952 PDS5AQ29RF7 1337 aaKnown RBP17.11■□□□□ 0.33
NUP188-207ENST00000487952 PSMD14O00487 310 aa17.1■□□□□ 0.33
NUP188-207ENST00000487952 DPY19L2Q6NUT2 758 aa17.1■□□□□ 0.33
NUP188-207ENST00000487952 PI16Q6UXB8 463 aa17.1■□□□□ 0.33
NUP188-207ENST00000487952 PI4K2BQ8TCG2 481 aa17.1■□□□□ 0.33
NUP188-207ENST00000487952 HAUS7Q99871 368 aa17.1■□□□□ 0.33
NUP188-207ENST00000487952 OSBPL3Q9H4L5 887 aa17.1■□□□□ 0.33
NUP188-207ENST00000487952 KCNQ5Q9NR82 932 aa17.1■□□□□ 0.33
NUP188-207ENST00000487952 GJA3Q9Y6H8 435 aa17.1■□□□□ 0.33
NUP188-207ENST00000487952 TTF1Q15361 905 aaPredicted RBP17.09■□□□□ 0.33
NUP188-207ENST00000487952 MFSD14BQ5SR56 506 aa17.09■□□□□ 0.33
NUP188-207ENST00000487952 SPTY2D1Q68D10 685 aaPredicted RBP17.09■□□□□ 0.33
NUP188-207ENST00000487952 RSBN1LQ6PCB5 846 aaPredicted RBP17.09■□□□□ 0.33
NUP188-207ENST00000487952 PAG1Q9NWQ8 432 aa17.09■□□□□ 0.33
NUP188-207ENST00000487952 ABCF2Q9UG63 623 aa17.09■□□□□ 0.33
NUP188-207ENST00000487952 MYO3BQ8WXR4 1341 aa17.09■□□□□ 0.33
NUP188-207ENST00000487952 ZNF541Q9H0D2 1346 aa17.09■□□□□ 0.33
NUP188-207ENST00000487952 COL1A1P02452 1464 aaPredicted RBP17.09■□□□□ 0.33
NUP188-207ENST00000487952 SBF1O95248 1867 aa17.09■□□□□ 0.33
NUP188-207ENST00000487952 CCDC88AQ3V6T2 1871 aa17.09■□□□□ 0.33
NUP188-207ENST00000487952 TRIM6-TRIM34B2RNG4 842 aa17.08■□□□□ 0.32
NUP188-207ENST00000487952 GOLIM4O00461 696 aa17.08■□□□□ 0.32
NUP188-207ENST00000487952 VIL1P09327 827 aaKnown RBP17.08■□□□□ 0.32
NUP188-207ENST00000487952 FKBP1AP62942 108 aaKnown RBP17.08■□□□□ 0.32
NUP188-207ENST00000487952 DACT2Q5SW24 774 aa17.08■□□□□ 0.32
NUP188-207ENST00000487952 SKAP1Q86WV1 359 aa17.08■□□□□ 0.32
NUP188-207ENST00000487952 LRP2BPQ9P2M1 347 aa17.08■□□□□ 0.32
NUP188-207ENST00000487952 NDUFB9Q9Y6M9 179 aa17.08■□□□□ 0.32
NUP188-207ENST00000487952 GOLGB1Q14789 3259 aaKnown RBP17.08■□□□□ 0.32
NUP188-207ENST00000487952 SALL1Q9NSC2 1324 aa17.07■□□□□ 0.32
NUP188-207ENST00000487952 MAP4K4O95819 1239 aaPredicted RBP17.07■□□□□ 0.32
NUP188-207ENST00000487952 LDHBP07195 334 aaKnown RBP17.07■□□□□ 0.32
NUP188-207ENST00000487952 ERICH6Q7L0X2 663 aa17.07■□□□□ 0.32
NUP188-207ENST00000487952 CHD4Q14839 1912 aa17.07■□□□□ 0.32
NUP188-207ENST00000487952 DICER1Q9UPY3 1922 aaKnown RBP17.07■□□□□ 0.32
NUP188-207ENST00000487952 TIAM2Q8IVF5 1701 aa17.07■□□□□ 0.32
NUP188-207ENST00000487952 CYP2E1P05181 493 aaPredicted RBP17.06■□□□□ 0.32
NUP188-207ENST00000487952 RPS12P25398 132 aaKnown RBP17.06■□□□□ 0.32
NUP188-207ENST00000487952 TTC22Q5TAA0 569 aa17.06■□□□□ 0.32
NUP188-207ENST00000487952 TBC1D9Q6ZT07 1266 aa17.06■□□□□ 0.32
NUP188-207ENST00000487952 CNTROBQ8N137 903 aa17.06■□□□□ 0.32
NUP188-207ENST00000487952 GPC2Q8N158 579 aa17.06■□□□□ 0.32
NUP188-207ENST00000487952 MXD3Q9BW11 206 aa17.06■□□□□ 0.32
NUP188-207ENST00000487952 RAI14Q9P0K7 980 aa17.06■□□□□ 0.32
NUP188-207ENST00000487952 SUGT1Q9Y2Z0 365 aa17.06■□□□□ 0.32
NUP188-207ENST00000487952 MYH13Q9UKX3 1938 aa17.06■□□□□ 0.32
NUP188-207ENST00000487952 MAST3O60307 1309 aa17.05■□□□□ 0.32
NUP188-207ENST00000487952 F8W031 263 aaPredicted RBP17.05■□□□□ 0.32
NUP188-207ENST00000487952 IDH1O75874 414 aaKnown RBP17.05■□□□□ 0.32
NUP188-207ENST00000487952 MAP3K12Q12852 859 aa17.05■□□□□ 0.32
NUP188-207ENST00000487952 LRRFIP1Q32MZ4 808 aaKnown RBP17.05■□□□□ 0.32
NUP188-207ENST00000487952 DZIP1Q86YF9 867 aaKnown RBP17.05■□□□□ 0.32
NUP188-207ENST00000487952 KIAA0825Q8IV33 1275 aa17.05■□□□□ 0.32
NUP188-207ENST00000487952 AGBL3Q8NEM8 1001 aa17.05■□□□□ 0.32
NUP188-207ENST00000487952 RILPL2Q969X0 211 aa17.05■□□□□ 0.32
NUP188-207ENST00000487952 EDC3Q96F86 508 aaKnown RBP17.05■□□□□ 0.32
NUP188-207ENST00000487952 ANTXR1Q9H6X2 564 aa17.05■□□□□ 0.32
NUP188-207ENST00000487952 HDAC9Q9UKV0 1011 aa17.05■□□□□ 0.32
NUP188-207ENST00000487952 ZBTB12Q9Y330 459 aaPredicted RBP17.05■□□□□ 0.32
NUP188-207ENST00000487952 SCN9AQ15858 1988 aa17.05■□□□□ 0.32
NUP188-207ENST00000487952 DDNO94850 711 aaPredicted RBP17.04■□□□□ 0.32
NUP188-207ENST00000487952 PRDX5P30044 214 aa17.04■□□□□ 0.32
NUP188-207ENST00000487952 GMPSP49915 693 aaPredicted RBP17.04■□□□□ 0.32
NUP188-207ENST00000487952 OGFOD1Q8N543 542 aa17.04■□□□□ 0.32
NUP188-207ENST00000487952 CERS5Q8N5B7 392 aa17.04■□□□□ 0.32
NUP188-207ENST00000487952 EVI5LQ96CN4 794 aa17.04■□□□□ 0.32
NUP188-207ENST00000487952 FSD1Q9BTV5 496 aa17.04■□□□□ 0.32
NUP188-207ENST00000487952 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.04■□□□□ 0.324e-8■■■■■ 27.9
NUP188-207ENST00000487952 PIH1D3Q9NQM4 214 aaKnown RBP17.04■□□□□ 0.32
NUP188-207ENST00000487952 TTF2Q9UNY4 1162 aaKnown RBP17.04■□□□□ 0.32
NUP188-207ENST00000487952 GLTPD2A6NH11 291 aa17.03■□□□□ 0.32
NUP188-207ENST00000487952 IGSF3O75054 1194 aa17.03■□□□□ 0.32
NUP188-207ENST00000487952 LMOD1P29536 600 aaPredicted RBP17.03■□□□□ 0.32
NUP188-207ENST00000487952 SLF2Q8IX21 1173 aa17.03■□□□□ 0.32
NUP188-207ENST00000487952 KBTBD3Q8NAB2 608 aa17.03■□□□□ 0.32
NUP188-207ENST00000487952 DPF2Q92785 391 aa17.03■□□□□ 0.32
NUP188-207ENST00000487952 USP17L8P0C7I0 530 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms