RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 NT5C1AQ9BXI3 368 aa4.8□□□□□ -1.64
GPNMB-212ENST00000487890 CNTNAP3Q9BZ76 1288 aa4.8□□□□□ -1.64
GPNMB-212ENST00000487890 KCNQ5Q9NR82 932 aa4.8□□□□□ -1.64
GPNMB-212ENST00000487890 UBP1Q9NZI7 540 aa4.8□□□□□ -1.64
GPNMB-212ENST00000487890 PPM1HQ9ULR3 514 aa4.8□□□□□ -1.64
GPNMB-212ENST00000487890 PRXQ9BXM0 1461 aa4.8□□□□□ -1.64
GPNMB-212ENST00000487890 SOS2Q07890 1332 aaPredicted RBP4.79□□□□□ -1.64
GPNMB-212ENST00000487890 A0A0G2JS52 829 aa4.79□□□□□ -1.64
GPNMB-212ENST00000487890 PHF20L1A8MW92 1017 aa4.79□□□□□ -1.64
GPNMB-212ENST00000487890 THBS1P07996 1170 aa4.79□□□□□ -1.64
GPNMB-212ENST00000487890 XRCC5P13010 732 aaKnown RBP4.79□□□□□ -1.64
GPNMB-212ENST00000487890 GRIA4P48058 902 aa4.79□□□□□ -1.64
GPNMB-212ENST00000487890 SPRED3Q2MJR0 410 aa4.79□□□□□ -1.64
GPNMB-212ENST00000487890 CCNJLQ8IV13 435 aa4.79□□□□□ -1.64
GPNMB-212ENST00000487890 MKL1Q969V6 931 aa4.79□□□□□ -1.64
GPNMB-212ENST00000487890 GAS2L1Q99501 681 aaPredicted RBP4.79□□□□□ -1.64
GPNMB-212ENST00000487890 OSMRQ99650 979 aa4.79□□□□□ -1.64
GPNMB-212ENST00000487890 ZKSCAN3Q9BRR0 538 aa4.79□□□□□ -1.64
GPNMB-212ENST00000487890 STRN4Q9NRL3 753 aa4.79□□□□□ -1.64
GPNMB-212ENST00000487890 HCN2Q9UL51 889 aa4.79□□□□□ -1.64
GPNMB-212ENST00000487890 DYRK1BQ9Y463 629 aa4.79□□□□□ -1.64
GPNMB-212ENST00000487890 MAP3K4Q9Y6R4 1608 aa4.79□□□□□ -1.64
GPNMB-212ENST00000487890 GLI2P10070 1586 aa4.78□□□□□ -1.64
GPNMB-212ENST00000487890 EPRSP07814 1512 aaKnown RBP4.78□□□□□ -1.64
GPNMB-212ENST00000487890 KDM5BQ9UGL1 1544 aa4.78□□□□□ -1.64
GPNMB-212ENST00000487890 WDR7Q9Y4E6 1490 aa4.78□□□□□ -1.64
GPNMB-212ENST00000487890 METTL12A8MUP2 240 aa4.78□□□□□ -1.64
GPNMB-212ENST00000487890 EFSO43281 561 aa4.78□□□□□ -1.64
GPNMB-212ENST00000487890 RARAP10276 462 aa4.78□□□□□ -1.64
GPNMB-212ENST00000487890 CRKP46108 304 aa4.78□□□□□ -1.64
GPNMB-212ENST00000487890 LIG3P49916 1009 aa4.78□□□□□ -1.64
GPNMB-212ENST00000487890 PRR20EP86478 221 aa4.78□□□□□ -1.64
GPNMB-212ENST00000487890 PRR20CP86479 221 aa4.78□□□□□ -1.64
GPNMB-212ENST00000487890 PRR20DP86480 221 aa4.78□□□□□ -1.64
GPNMB-212ENST00000487890 PRR20BP86481 221 aa4.78□□□□□ -1.64
GPNMB-212ENST00000487890 PRR20AP86496 221 aa4.78□□□□□ -1.64
GPNMB-212ENST00000487890 CAMK2GQ13555 558 aaPredicted RBP4.78□□□□□ -1.64
GPNMB-212ENST00000487890 RAB33AQ14088 237 aa4.78□□□□□ -1.64
GPNMB-212ENST00000487890 PGBD3Q8N328 593 aa4.78□□□□□ -1.64
GPNMB-212ENST00000487890 GOLM1Q8NBJ4 401 aa4.78□□□□□ -1.64
GPNMB-212ENST00000487890 HNRNPLLQ8WVV9 542 aaKnown RBP4.78□□□□□ -1.64
GPNMB-212ENST00000487890 RNPC3Q96LT9 517 aaKnown RBP4.78□□□□□ -1.64
GPNMB-212ENST00000487890 HHIPQ96QV1 700 aa4.78□□□□□ -1.64
GPNMB-212ENST00000487890 SIRPGQ9P1W8 387 aa4.78□□□□□ -1.64
GPNMB-212ENST00000487890 SUPT16HQ9Y5B9 1047 aaKnown RBP4.78□□□□□ -1.64
GPNMB-212ENST00000487890 EEA1Q15075 1411 aa4.78□□□□□ -1.64
GPNMB-212ENST00000487890 ABCA8O94911 1581 aa4.78□□□□□ -1.64
GPNMB-212ENST00000487890 CFAP43Q8NDM7 1665 aa4.77□□□□□ -1.65
GPNMB-212ENST00000487890 TEX14Q8IWB6 1497 aa4.77□□□□□ -1.65
GPNMB-212ENST00000487890 RAPGEF6Q8TEU7 1601 aa4.77□□□□□ -1.65
GPNMB-212ENST00000487890 FAM221BA6H8Z2 402 aa4.77□□□□□ -1.65
GPNMB-212ENST00000487890 ENC1O14682 589 aa4.77□□□□□ -1.65
GPNMB-212ENST00000487890 ATXN7O15265 892 aaPredicted RBP4.77□□□□□ -1.65
GPNMB-212ENST00000487890 PAGE1O75459 146 aa4.77□□□□□ -1.65
GPNMB-212ENST00000487890 KIF4AO95239 1232 aa4.77□□□□□ -1.65
GPNMB-212ENST00000487890 RLBP1P12271 317 aa4.77□□□□□ -1.65
GPNMB-212ENST00000487890 TFE3P19532 575 aaPredicted RBP4.77□□□□□ -1.65
GPNMB-212ENST00000487890 NFKB1P19838 968 aa4.77□□□□□ -1.65
GPNMB-212ENST00000487890 HSD3B2P26439 372 aa4.77□□□□□ -1.65
GPNMB-212ENST00000487890 LMNB2Q03252 620 aa4.77□□□□□ -1.65
GPNMB-212ENST00000487890 TNP2Q05952 138 aa4.77□□□□□ -1.65
GPNMB-212ENST00000487890 COL9A2Q14055 689 aaPredicted RBP4.77□□□□□ -1.65
GPNMB-212ENST00000487890 EFHC2Q5JST6 749 aa4.77□□□□□ -1.65
GPNMB-212ENST00000487890 SNAP47Q5SQN1 464 aa4.77□□□□□ -1.65
GPNMB-212ENST00000487890 PCNX4Q63HM2 1172 aa4.77□□□□□ -1.65
GPNMB-212ENST00000487890 NCAPG2Q86XI2 1143 aa4.77□□□□□ -1.65
GPNMB-212ENST00000487890 CEP120Q8N960 986 aa4.77□□□□□ -1.65
GPNMB-212ENST00000487890 CPLX3Q8WVH0 158 aa4.77□□□□□ -1.65
GPNMB-212ENST00000487890 NKD1Q969G9 470 aa4.77□□□□□ -1.65
GPNMB-212ENST00000487890 ANAPC16Q96DE5 110 aa4.77□□□□□ -1.65
GPNMB-212ENST00000487890 NECAB3Q96P71 396 aaPredicted RBP4.77□□□□□ -1.65
GPNMB-212ENST00000487890 SRPK1Q96SB4 655 aaKnown RBP4.77□□□□□ -1.65
GPNMB-212ENST00000487890 DZANK1Q9NVP4 752 aa4.77□□□□□ -1.65
GPNMB-212ENST00000487890 TLR7Q9NYK1 1049 aaKnown RBP4.77□□□□□ -1.65
GPNMB-212ENST00000487890 STRIP2Q9ULQ0 834 aa4.77□□□□□ -1.65
GPNMB-212ENST00000487890 SENP3-EIF4A1A0A087X0R7 540 aa4.76□□□□□ -1.65
GPNMB-212ENST00000487890 DCDC2BA2VCK2 349 aa4.76□□□□□ -1.65
GPNMB-212ENST00000487890 NFKBIEO00221 500 aa4.76□□□□□ -1.65
GPNMB-212ENST00000487890 KHNYNO15037 678 aaKnown RBP4.76□□□□□ -1.65
GPNMB-212ENST00000487890 TLR3O15455 904 aaKnown RBP4.76□□□□□ -1.65
GPNMB-212ENST00000487890 PSAPP07602 524 aa4.76□□□□□ -1.65
GPNMB-212ENST00000487890 FAM157BP0CG42 384 aa4.76□□□□□ -1.65
GPNMB-212ENST00000487890 BMP1P13497 986 aa4.76□□□□□ -1.65
GPNMB-212ENST00000487890 ITPKAP23677 461 aa4.76□□□□□ -1.65
GPNMB-212ENST00000487890 APOBRQ0VD83 1088 aa4.76□□□□□ -1.65
GPNMB-212ENST00000487890 FAAP100Q0VG06 881 aa4.76□□□□□ -1.65
GPNMB-212ENST00000487890 HYAL2Q12891 473 aa4.76□□□□□ -1.65
GPNMB-212ENST00000487890 UBAP2LQ14157 1087 aaKnown RBP4.76□□□□□ -1.65
GPNMB-212ENST00000487890 PTPROQ16827 1216 aa4.76□□□□□ -1.65
GPNMB-212ENST00000487890 FHOD3Q2V2M9 1422 aa4.76□□□□□ -1.65
GPNMB-212ENST00000487890 SAMD9Q5K651 1589 aa4.76□□□□□ -1.65
GPNMB-212ENST00000487890 TTBK2Q6IQ55 1244 aa4.76□□□□□ -1.65
GPNMB-212ENST00000487890 CCDC81Q6ZN84 652 aa4.76□□□□□ -1.65
GPNMB-212ENST00000487890 AGMOQ6ZNB7 445 aa4.76□□□□□ -1.65
GPNMB-212ENST00000487890 TRIM46Q7Z4K8 759 aa4.76□□□□□ -1.65
GPNMB-212ENST00000487890 SLITRK4Q8IW52 837 aa4.76□□□□□ -1.65
GPNMB-212ENST00000487890 FBXO27Q8NI29 283 aa4.76□□□□□ -1.65
GPNMB-212ENST00000487890 NXPE3Q969Y0 559 aa4.76□□□□□ -1.65
GPNMB-212ENST00000487890 SHDQ96IW2 340 aa4.76□□□□□ -1.65
GPNMB-212ENST00000487890 SRRTQ9BXP5 876 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms