RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 CAVIN4Q5BKX8 364 aa11.31□□□□□ -0.6
SF3B1-211ENST00000487698 SLC9C2Q5TAH2 1124 aa11.31□□□□□ -0.6
SF3B1-211ENST00000487698 SPRYD3Q8NCJ5 442 aa11.31□□□□□ -0.6
SF3B1-211ENST00000487698 PUS7LQ9H0K6 701 aaKnown RBP11.31□□□□□ -0.6
SF3B1-211ENST00000487698 ZSWIM6Q9HCJ5 1215 aa11.31□□□□□ -0.6
SF3B1-211ENST00000487698 GNL3LQ9NVN8 582 aaKnown RBP11.31□□□□□ -0.6
SF3B1-211ENST00000487698 WWC3Q9ULE0 1092 aa11.31□□□□□ -0.6
SF3B1-211ENST00000487698 TAF6LQ9Y6J9 622 aa11.31□□□□□ -0.6
SF3B1-211ENST00000487698 CCDC88AQ3V6T2 1871 aa11.31□□□□□ -0.6
SF3B1-211ENST00000487698 XDHP47989 1333 aa11.3□□□□□ -0.6
SF3B1-211ENST00000487698 SEMA3EO15041 775 aa11.3□□□□□ -0.6
SF3B1-211ENST00000487698 IDH1O75874 414 aaKnown RBP11.3□□□□□ -0.6
SF3B1-211ENST00000487698 WASHC4Q2M389 1173 aa11.3□□□□□ -0.6
SF3B1-211ENST00000487698 JAKMIP1Q96N16 626 aaKnown RBP11.3□□□□□ -0.6
SF3B1-211ENST00000487698 STK32BQ9NY57 414 aa11.3□□□□□ -0.6
SF3B1-211ENST00000487698 ZNF532Q9HCE3 1301 aa11.3□□□□□ -0.6
SF3B1-211ENST00000487698 BBOX1O75936 387 aa11.3□□□□□ -0.6
SF3B1-211ENST00000487698 CASTP20810 708 aaKnown RBP11.3□□□□□ -0.6
SF3B1-211ENST00000487698 BAG6P46379 1132 aa11.3□□□□□ -0.6
SF3B1-211ENST00000487698 C15orf52Q6ZUT6 534 aaKnown RBP11.3□□□□□ -0.6
SF3B1-211ENST00000487698 LEMD3Q9Y2U8 911 aa11.3□□□□□ -0.6
SF3B1-211ENST00000487698 PARP3Q9Y6F1 533 aa11.3□□□□□ -0.6
SF3B1-211ENST00000487698 CHD4Q14839 1912 aa11.29□□□□□ -0.6
SF3B1-211ENST00000487698 GPAA1O43292 621 aa11.29□□□□□ -0.6
SF3B1-211ENST00000487698 CYP21A2P08686 494 aa11.29□□□□□ -0.6
SF3B1-211ENST00000487698 SRGNP10124 158 aa11.29□□□□□ -0.6
SF3B1-211ENST00000487698 MAP3K12Q12852 859 aa11.29□□□□□ -0.6
SF3B1-211ENST00000487698 MSL1Q68DK7 614 aa11.29□□□□□ -0.6
SF3B1-211ENST00000487698 DENND2AQ9ULE3 1009 aa11.29□□□□□ -0.6
SF3B1-211ENST00000487698 IQSEC3Q9UPP2 1182 aaPredicted RBP11.29□□□□□ -0.6
SF3B1-211ENST00000487698 DUOX1Q9NRD9 1551 aa11.29□□□□□ -0.6
SF3B1-211ENST00000487698 DLEC1Q9Y238 1755 aa11.29□□□□□ -0.6
SF3B1-211ENST00000487698 HIBADHP31937 336 aaKnown RBP11.29□□□□□ -0.6
SF3B1-211ENST00000487698 RUFY3Q7L099 469 aa11.29□□□□□ -0.6
SF3B1-211ENST00000487698 TMC4Q7Z404 712 aa11.29□□□□□ -0.6
SF3B1-211ENST00000487698 TXNRD3Q86VQ6 643 aa11.29□□□□□ -0.6
SF3B1-211ENST00000487698 TMX3Q96JJ7 454 aa11.29□□□□□ -0.6
SF3B1-211ENST00000487698 PODXL2Q9NZ53 605 aa11.29□□□□□ -0.6
SF3B1-211ENST00000487698 ANKIB1Q9P2G1 1089 aa11.29□□□□□ -0.6
SF3B1-211ENST00000487698 CPA1P15085 419 aa11.28□□□□□ -0.6
SF3B1-211ENST00000487698 PSMA5P28066 241 aa11.28□□□□□ -0.6
SF3B1-211ENST00000487698 AK2P54819 239 aa11.28□□□□□ -0.6
SF3B1-211ENST00000487698 GPSM2P81274 684 aa11.28□□□□□ -0.6
SF3B1-211ENST00000487698 SF3B2Q13435 895 aaKnown RBP11.28□□□□□ -0.6
SF3B1-211ENST00000487698 COL9A3Q14050 684 aaPredicted RBP11.28□□□□□ -0.6
SF3B1-211ENST00000487698 KRT32Q14532 448 aa11.28□□□□□ -0.6
SF3B1-211ENST00000487698 DEFB132Q7Z7B7 95 aa11.28□□□□□ -0.6
SF3B1-211ENST00000487698 VPS37DQ86XT2 251 aa11.28□□□□□ -0.6
SF3B1-211ENST00000487698 CHMP5Q9NZZ3 219 aa11.28□□□□□ -0.6
SF3B1-211ENST00000487698 CIZ1Q9ULV3 898 aaPredicted RBP11.28□□□□□ -0.6
SF3B1-211ENST00000487698 CYP46A1Q9Y6A2 500 aa11.28□□□□□ -0.6
SF3B1-211ENST00000487698 NPR1P16066 1061 aa11.27□□□□□ -0.6
SF3B1-211ENST00000487698 PDE6BP35913 854 aa11.27□□□□□ -0.6
SF3B1-211ENST00000487698 CUL4AQ13619 759 aa11.27□□□□□ -0.6
SF3B1-211ENST00000487698 MAGEB6Q8N7X4 407 aa11.27□□□□□ -0.6
SF3B1-211ENST00000487698 TIAM2Q8IVF5 1701 aa11.27□□□□□ -0.61
SF3B1-211ENST00000487698 HSP90AA1P07900 732 aaKnown RBP11.27□□□□□ -0.61
SF3B1-211ENST00000487698 STOX1Q6ZVD7 989 aa11.27□□□□□ -0.61
SF3B1-211ENST00000487698 ALDH8A1Q9H2A2 487 aaPredicted RBP11.27□□□□□ -0.61
SF3B1-211ENST00000487698 PPEF1O14829 653 aaPredicted RBP11.26□□□□□ -0.61
SF3B1-211ENST00000487698 RPS6KB1P23443 525 aa11.26□□□□□ -0.61
SF3B1-211ENST00000487698 ATP2B4P23634 1241 aa11.26□□□□□ -0.61
SF3B1-211ENST00000487698 SP8Q8IXZ3 490 aa11.26□□□□□ -0.61
SF3B1-211ENST00000487698 STRBPQ96SI9 672 aaKnown RBP11.26□□□□□ -0.61
SF3B1-211ENST00000487698 ANP32EQ9BTT0 268 aa11.26□□□□□ -0.61
SF3B1-211ENST00000487698 PDRG1Q9NUG6 133 aa11.26□□□□□ -0.61
SF3B1-211ENST00000487698 LRP2BPQ9P2M1 347 aa11.26□□□□□ -0.61
SF3B1-211ENST00000487698 KIF13BQ9NQT8 1826 aa11.26□□□□□ -0.61
SF3B1-211ENST00000487698 ZMYM6O95789 1325 aa11.26□□□□□ -0.61
SF3B1-211ENST00000487698 A0A0G2JLW4 131 aa11.26□□□□□ -0.61
SF3B1-211ENST00000487698 TTLL5Q6EMB2 1281 aa11.26□□□□□ -0.61
SF3B1-211ENST00000487698 BLOC1S2Q6QNY1 142 aa11.26□□□□□ -0.61
SF3B1-211ENST00000487698 FOXD4L1Q9NU39 408 aa11.26□□□□□ -0.61
SF3B1-211ENST00000487698 CTNNA3Q9UI47 895 aa11.26□□□□□ -0.61
SF3B1-211ENST00000487698 ATP6V0A2Q9Y487 856 aa11.26□□□□□ -0.61
SF3B1-211ENST00000487698 SLX4Q8IY92 1834 aa11.25□□□□□ -0.61
SF3B1-211ENST00000487698 SALL1Q9NSC2 1324 aa11.25□□□□□ -0.61
SF3B1-211ENST00000487698 UFL1O94874 794 aa11.25□□□□□ -0.61
SF3B1-211ENST00000487698 FGAP02671 866 aa11.25□□□□□ -0.61
SF3B1-211ENST00000487698 TDRD7Q8NHU6 1098 aaKnown RBP11.25□□□□□ -0.61
SF3B1-211ENST00000487698 ZNF384Q8TF68 577 aa11.25□□□□□ -0.61
SF3B1-211ENST00000487698 AIDAQ96BJ3 306 aa11.25□□□□□ -0.61
SF3B1-211ENST00000487698 MASTLQ96GX5 879 aa11.25□□□□□ -0.61
SF3B1-211ENST00000487698 INTS4Q96HW7 963 aaKnown RBP11.25□□□□□ -0.61
SF3B1-211ENST00000487698 NEK1Q96PY6 1258 aa11.25□□□□□ -0.61
SF3B1-211ENST00000487698 GGA1Q9UJY5 639 aa11.25□□□□□ -0.61
SF3B1-211ENST00000487698 NSFL1CQ9UNZ2 370 aaKnown RBP11.25□□□□□ -0.61
SF3B1-211ENST00000487698 LIMCH1Q9UPQ0 1083 aa11.25□□□□□ -0.61
SF3B1-211ENST00000487698 MBD4O95243 580 aa11.24□□□□□ -0.61
SF3B1-211ENST00000487698 ALDH1B1P30837 517 aa11.24□□□□□ -0.61
SF3B1-211ENST00000487698 NOL8Q76FK4 1167 aaKnown RBP11.24□□□□□ -0.61
SF3B1-211ENST00000487698 ZNF804AQ7Z570 1209 aa11.24□□□□□ -0.61
SF3B1-211ENST00000487698 ADGRA1Q86SQ6 560 aa11.24□□□□□ -0.61
SF3B1-211ENST00000487698 ZGPATQ8N5A5 531 aaKnown RBP11.24□□□□□ -0.61
SF3B1-211ENST00000487698 TBC1D16Q8TBP0 767 aa11.24□□□□□ -0.61
SF3B1-211ENST00000487698 PDGFDQ9GZP0 370 aaPredicted RBP11.24□□□□□ -0.61
SF3B1-211ENST00000487698 ABCF2Q9UG63 623 aa11.24□□□□□ -0.61
SF3B1-211ENST00000487698 POLLQ9UGP5 575 aa11.24□□□□□ -0.61
SF3B1-211ENST00000487698 C10orf71Q711Q0 1435 aa11.24□□□□□ -0.61
SF3B1-211ENST00000487698 E7EWF7 191 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms