RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 TMED8Q6PL24 325 aaPredicted RBP24.26■■□□□ 1.47
PHF1-209ENST00000487667 VPS37DQ86XT2 251 aa24.26■■□□□ 1.47
PHF1-209ENST00000487667 NEK1Q96PY6 1258 aa24.26■■□□□ 1.47
PHF1-209ENST00000487667 PIH1D3Q9NQM4 214 aaKnown RBP24.26■■□□□ 1.47
PHF1-209ENST00000487667 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.26■■□□□ 1.47
PHF1-209ENST00000487667 PDS5AQ29RF7 1337 aaKnown RBP24.26■■□□□ 1.47
PHF1-209ENST00000487667 BCAMP50895 628 aa24.25■■□□□ 1.47
PHF1-209ENST00000487667 RPGRQ92834 1020 aaKnown RBP24.25■■□□□ 1.47
PHF1-209ENST00000487667 DENND2AQ9ULE3 1009 aa24.25■■□□□ 1.47
PHF1-209ENST00000487667 CYP21A2P08686 494 aa24.25■■□□□ 1.47
PHF1-209ENST00000487667 DOCK2Q92608 1830 aa24.24■■□□□ 1.47
PHF1-209ENST00000487667 CHGBP05060 677 aa24.24■■□□□ 1.47
PHF1-209ENST00000487667 PDE6AP16499 860 aa24.24■■□□□ 1.47
PHF1-209ENST00000487667 CRY2Q49AN0 593 aa24.24■■□□□ 1.47
PHF1-209ENST00000487667 DDX11L8A8MPP1 907 aa24.23■■□□□ 1.47
PHF1-209ENST00000487667 GPAA1O43292 621 aa24.23■■□□□ 1.47
PHF1-209ENST00000487667 RBM17Q96I25 401 aaKnown RBP24.23■■□□□ 1.47
PHF1-209ENST00000487667 TNRC6CQ9HCJ0 1690 aaKnown RBP24.23■■□□□ 1.47
PHF1-209ENST00000487667 PDIA4P13667 645 aaKnown RBP24.23■■□□□ 1.47
PHF1-209ENST00000487667 IMMTQ16891 758 aaKnown RBP24.23■■□□□ 1.47
PHF1-209ENST00000487667 CLEC17AQ6ZS10 378 aa24.23■■□□□ 1.47
PHF1-209ENST00000487667 LEMD3Q9Y2U8 911 aa24.23■■□□□ 1.47
PHF1-209ENST00000487667 TMC4Q7Z404 712 aa24.22■■□□□ 1.47
PHF1-209ENST00000487667 PUS7LQ9H0K6 701 aaKnown RBP24.22■■□□□ 1.47
PHF1-209ENST00000487667 COL4A1P02462 1669 aa24.22■■□□□ 1.47
PHF1-209ENST00000487667 ZNF532Q9HCE3 1301 aa24.22■■□□□ 1.47
PHF1-209ENST00000487667 MCM4P33991 863 aa24.22■■□□□ 1.47
PHF1-209ENST00000487667 FBXO33Q7Z6M2 555 aa24.22■■□□□ 1.47
PHF1-209ENST00000487667 COL23A1Q86Y22 540 aaPredicted RBP24.22■■□□□ 1.47
PHF1-209ENST00000487667 CCDC125Q86Z20 511 aa24.22■■□□□ 1.47
PHF1-209ENST00000487667 TNPO1Q92973 898 aaKnown RBP24.22■■□□□ 1.47
PHF1-209ENST00000487667 SNAP23O00161 211 aa24.21■■□□□ 1.47
PHF1-209ENST00000487667 POLRMTO00411 1230 aaKnown RBP24.21■■□□□ 1.47
PHF1-209ENST00000487667 NOL8Q76FK4 1167 aaKnown RBP24.21■■□□□ 1.47
PHF1-209ENST00000487667 TCRBV5S4A2TA0A5A2 114 aa24.2■■□□□ 1.46
PHF1-209ENST00000487667 GNAT2P19087 354 aa24.2■■□□□ 1.46
PHF1-209ENST00000487667 ZGPATQ8N5A5 531 aaKnown RBP24.2■■□□□ 1.46
PHF1-209ENST00000487667 AIDAQ96BJ3 306 aa24.2■■□□□ 1.46
PHF1-209ENST00000487667 FAM84BQ96KN1 310 aaPredicted RBP24.2■■□□□ 1.46
PHF1-209ENST00000487667 LRP2BPQ9P2M1 347 aa24.2■■□□□ 1.46
PHF1-209ENST00000487667 ZMYM6O95789 1325 aa24.2■■□□□ 1.46
PHF1-209ENST00000487667 KLRG2A4D1S0 409 aaPredicted RBP24.2■■□□□ 1.46
PHF1-209ENST00000487667 BBOX1O75936 387 aa24.2■■□□□ 1.46
PHF1-209ENST00000487667 HOXA10P31260 410 aaPredicted RBP24.2■■□□□ 1.46
PHF1-209ENST00000487667 SLFNL1Q499Z3 407 aa24.2■■□□□ 1.46
PHF1-209ENST00000487667 CCDC24Q8N4L8 307 aa24.2■■□□□ 1.46
PHF1-209ENST00000487667 CHMP4CQ96CF2 233 aa24.2■■□□□ 1.46
PHF1-209ENST00000487667 TAF1P21675 1872 aa24.19■■□□□ 1.46
PHF1-209ENST00000487667 GOLGA6L22H0YM25 854 aa24.19■■□□□ 1.46
PHF1-209ENST00000487667 HIBADHP31937 336 aaKnown RBP24.19■■□□□ 1.46
PHF1-209ENST00000487667 GSE1Q14687 1217 aa24.19■■□□□ 1.46
PHF1-209ENST00000487667 SLC15A2Q16348 729 aa24.19■■□□□ 1.46
PHF1-209ENST00000487667 ANO8Q9HCE9 1232 aaPredicted RBP24.19■■□□□ 1.46
PHF1-209ENST00000487667 STK32BQ9NY57 414 aa24.19■■□□□ 1.46
PHF1-209ENST00000487667 XDHP47989 1333 aa24.19■■□□□ 1.46
PHF1-209ENST00000487667 GYG1P46976 350 aa24.18■■□□□ 1.46
PHF1-209ENST00000487667 DHX32Q7L7V1 743 aaKnown RBP24.18■■□□□ 1.46
PHF1-209ENST00000487667 MAGEB6Q8N7X4 407 aa24.18■■□□□ 1.46
PHF1-209ENST00000487667 CRAMP1Q96RY5 1269 aa24.18■■□□□ 1.46
PHF1-209ENST00000487667 WWC3Q9ULE0 1092 aa24.18■■□□□ 1.46
PHF1-209ENST00000487667 CPA1P15085 419 aa24.18■■□□□ 1.46
PHF1-209ENST00000487667 ALX1Q15699 326 aa24.18■■□□□ 1.46
PHF1-209ENST00000487667 FGAP02671 866 aa24.17■■□□□ 1.46
PHF1-209ENST00000487667 DDR1Q08345 913 aa24.17■■□□□ 1.46
PHF1-209ENST00000487667 C15orf52Q6ZUT6 534 aaKnown RBP24.17■■□□□ 1.46
PHF1-209ENST00000487667 PNPLA7Q6ZV29 1317 aa24.17■■□□□ 1.46
PHF1-209ENST00000487667 BRIP1Q9BX63 1249 aa24.16■■□□□ 1.46
PHF1-209ENST00000487667 ANKIB1Q9P2G1 1089 aa24.16■■□□□ 1.46
PHF1-209ENST00000487667 E7EWF7 191 aa24.16■■□□□ 1.46
PHF1-209ENST00000487667 ZNF213O14771 459 aa24.16■■□□□ 1.46
PHF1-209ENST00000487667 STRBPQ96SI9 672 aaKnown RBP24.16■■□□□ 1.46
PHF1-209ENST00000487667 FBXL16Q8N461 479 aa24.15■■□□□ 1.46
PHF1-209ENST00000487667 SMC3Q9UQE7 1217 aa24.15■■□□□ 1.46
PHF1-209ENST00000487667 PATL2C9JE40 543 aaKnown RBP24.14■■□□□ 1.46
PHF1-209ENST00000487667 NACAP1Q9BZK3 213 aa24.14■■□□□ 1.46
PHF1-209ENST00000487667 TAF6LQ9Y6J9 622 aa24.14■■□□□ 1.46
PHF1-209ENST00000487667 WDR19Q8NEZ3 1342 aa24.14■■□□□ 1.45
PHF1-209ENST00000487667 ATP2B4P23634 1241 aa24.14■■□□□ 1.45
PHF1-209ENST00000487667 FGD1P98174 961 aa24.14■■□□□ 1.45
PHF1-209ENST00000487667 NRXN2Q9P2S2 1712 aa24.13■■□□□ 1.45
PHF1-209ENST00000487667 FOXP2O15409 715 aa24.13■■□□□ 1.45
PHF1-209ENST00000487667 TOB2Q14106 344 aaPredicted RBP24.13■■□□□ 1.45
PHF1-209ENST00000487667 TPCN1Q9ULQ1 816 aa24.13■■□□□ 1.45
PHF1-209ENST00000487667 MYO5AQ9Y4I1 1855 aaKnown RBP24.13■■□□□ 1.45
PHF1-209ENST00000487667 WDR33Q9C0J8 1336 aaKnown RBP24.12■■□□□ 1.45
PHF1-209ENST00000487667 SPTY2D1Q68D10 685 aaPredicted RBP24.12■■□□□ 1.45
PHF1-209ENST00000487667 RAI14Q9P0K7 980 aa24.12■■□□□ 1.45
PHF1-209ENST00000487667 PARP3Q9Y6F1 533 aa24.12■■□□□ 1.45
PHF1-209ENST00000487667 APPP05067 770 aa24.12■■□□□ 1.45
PHF1-209ENST00000487667 EXOSC10Q01780 885 aaKnown RBP24.12■■□□□ 1.45
PHF1-209ENST00000487667 TRDNQ13061 729 aa24.12■■□□□ 1.45
PHF1-209ENST00000487667 ME3Q16798 604 aa24.12■■□□□ 1.45
PHF1-209ENST00000487667 STOX1Q6ZVD7 989 aa24.12■■□□□ 1.45
PHF1-209ENST00000487667 ZNF804AQ7Z570 1209 aa24.12■■□□□ 1.45
PHF1-209ENST00000487667 NCOA7Q8NI08 942 aa24.12■■□□□ 1.45
PHF1-209ENST00000487667 AGXT2Q9BYV1 514 aa24.12■■□□□ 1.45
PHF1-209ENST00000487667 ABCF2Q9UG63 623 aa24.12■■□□□ 1.45
PHF1-209ENST00000487667 BRD1O95696 1058 aa24.11■■□□□ 1.45
PHF1-209ENST00000487667 PDE6BP35913 854 aa24.11■■□□□ 1.45
PHF1-209ENST00000487667 Q6ZUG5 572 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms