RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 CCL15-CCL14A0A0B4J2E2 113 aa7.79□□□□□ -1.16
COL4A3-206ENST00000487633 POTEB2H3BUK9 544 aa7.79□□□□□ -1.16
COL4A3-206ENST00000487633 GRK4P32298 578 aa7.79□□□□□ -1.16
COL4A3-206ENST00000487633 PLA2G5P39877 138 aa7.79□□□□□ -1.16
COL4A3-206ENST00000487633 MAGEA10P43363 369 aaPredicted RBP7.79□□□□□ -1.16
COL4A3-206ENST00000487633 CCL15Q16663 113 aa7.79□□□□□ -1.16
COL4A3-206ENST00000487633 C7orf61Q8IZ16 206 aa7.79□□□□□ -1.16
COL4A3-206ENST00000487633 PAWRQ96IZ0 340 aaKnown RBP7.79□□□□□ -1.16
COL4A3-206ENST00000487633 ISCA1Q9BUE6 129 aa7.79□□□□□ -1.16
COL4A3-206ENST00000487633 CPA4Q9UI42 421 aa7.79□□□□□ -1.16
COL4A3-206ENST00000487633 RIPOR2Q9Y4F9 1068 aa7.79□□□□□ -1.16
COL4A3-206ENST00000487633 IRS2Q9Y4H2 1338 aa7.78□□□□□ -1.16
COL4A3-206ENST00000487633 ARAP2Q8WZ64 1704 aa7.78□□□□□ -1.16
COL4A3-206ENST00000487633 BTBD19C9JJ37 291 aa7.78□□□□□ -1.16
COL4A3-206ENST00000487633 SNAP23O00161 211 aa7.78□□□□□ -1.16
COL4A3-206ENST00000487633 IRS4O14654 1257 aaPredicted RBP7.78□□□□□ -1.16
COL4A3-206ENST00000487633 TLR2O60603 784 aa7.78□□□□□ -1.16
COL4A3-206ENST00000487633 SGPL1O95470 568 aa7.78□□□□□ -1.16
COL4A3-206ENST00000487633 HOXD11P31277 338 aaPredicted RBP7.78□□□□□ -1.16
COL4A3-206ENST00000487633 PRKCZQ05513 592 aa7.78□□□□□ -1.16
COL4A3-206ENST00000487633 APOBEC3FQ8IUX4 373 aaKnown RBP7.78□□□□□ -1.16
COL4A3-206ENST00000487633 PRMT6Q96LA8 375 aaPredicted RBP7.78□□□□□ -1.16
COL4A3-206ENST00000487633 ZFYVE28Q9HCC9 887 aa7.78□□□□□ -1.16
COL4A3-206ENST00000487633 SRRDQ9UH36 339 aa7.78□□□□□ -1.16
COL4A3-206ENST00000487633 COL2A1P02458 1487 aaPredicted RBP7.78□□□□□ -1.16
COL4A3-206ENST00000487633 A0A1B0GUL6 1792 aa7.78□□□□□ -1.16
COL4A3-206ENST00000487633 ADGRA2Q96PE1 1338 aa7.78□□□□□ -1.16
COL4A3-206ENST00000487633 F8W031 263 aaPredicted RBP7.77□□□□□ -1.17
COL4A3-206ENST00000487633 ELNP15502 786 aa7.77□□□□□ -1.17
COL4A3-206ENST00000487633 PSMC4P43686 418 aa7.77□□□□□ -1.17
COL4A3-206ENST00000487633 VGLL4Q14135 290 aa7.77□□□□□ -1.17
COL4A3-206ENST00000487633 OTUD7BQ6GQQ9 843 aa7.77□□□□□ -1.17
COL4A3-206ENST00000487633 C17orf99Q6UX52 265 aa7.77□□□□□ -1.17
COL4A3-206ENST00000487633 TDHQ8IZJ6 230 aa7.77□□□□□ -1.17
COL4A3-206ENST00000487633 JAG2Q9Y219 1238 aa7.77□□□□□ -1.17
COL4A3-206ENST00000487633 AK9Q5TCS8 1911 aa7.77□□□□□ -1.17
COL4A3-206ENST00000487633 COL1A1P02452 1464 aaPredicted RBP7.76□□□□□ -1.17
COL4A3-206ENST00000487633 U2AF1L5P0DN76 240 aaPredicted RBP7.76□□□□□ -1.17
COL4A3-206ENST00000487633 GTF2IP78347 998 aa7.76□□□□□ -1.17
COL4A3-206ENST00000487633 U2AF1Q01081 240 aaKnown RBP eCLIP7.76□□□□□ -1.17
COL4A3-206ENST00000487633 RASA3Q14644 834 aa7.76□□□□□ -1.17
COL4A3-206ENST00000487633 STRIP1Q5VSL9 837 aa7.76□□□□□ -1.17
COL4A3-206ENST00000487633 ANKRD13AQ8IZ07 590 aa7.76□□□□□ -1.17
COL4A3-206ENST00000487633 USP38Q8NB14 1042 aa7.76□□□□□ -1.17
COL4A3-206ENST00000487633 TEPSINQ96N21 525 aa7.76□□□□□ -1.17
COL4A3-206ENST00000487633 DEFB118Q96PH6 123 aa7.76□□□□□ -1.17
COL4A3-206ENST00000487633 CDX2Q99626 313 aaPredicted RBP7.76□□□□□ -1.17
COL4A3-206ENST00000487633 VEZTQ9HBM0 779 aa7.76□□□□□ -1.17
COL4A3-206ENST00000487633 DNAH12Q6ZR08 3092 aa7.76□□□□□ -1.17
COL4A3-206ENST00000487633 MYH3P11055 1940 aa7.76□□□□□ -1.17
COL4A3-206ENST00000487633 ZNF804BA4D1E1 1349 aa7.76□□□□□ -1.17
COL4A3-206ENST00000487633 XDHP47989 1333 aa7.76□□□□□ -1.17
COL4A3-206ENST00000487633 MYPNQ86TC9 1320 aa7.76□□□□□ -1.17
COL4A3-206ENST00000487633 MED23Q9ULK4 1368 aa7.75□□□□□ -1.17
COL4A3-206ENST00000487633 HTATSF1O43719 755 aaKnown RBP7.75□□□□□ -1.17
COL4A3-206ENST00000487633 PPP1R12BO60237 982 aaPredicted RBP7.75□□□□□ -1.17
COL4A3-206ENST00000487633 TTLL5Q6EMB2 1281 aa7.75□□□□□ -1.17
COL4A3-206ENST00000487633 ANKRD13DQ6ZTN6 518 aa7.75□□□□□ -1.17
COL4A3-206ENST00000487633 OGFOD1Q8N543 542 aa7.75□□□□□ -1.17
COL4A3-206ENST00000487633 NKX2-3Q8TAU0 364 aa7.75□□□□□ -1.17
COL4A3-206ENST00000487633 RAET1EQ8TD07 263 aa7.75□□□□□ -1.17
COL4A3-206ENST00000487633 MINPP1Q9UNW1 487 aa7.75□□□□□ -1.17
COL4A3-206ENST00000487633 SNCAIPQ9Y6H5 919 aa7.75□□□□□ -1.17
COL4A3-206ENST00000487633 PLXNB2O15031 1838 aa7.75□□□□□ -1.17
COL4A3-206ENST00000487633 TCF20Q9UGU0 1960 aaKnown RBP7.75□□□□□ -1.17
COL4A3-206ENST00000487633 IRF6O14896 467 aa7.74□□□□□ -1.17
COL4A3-206ENST00000487633 TFRCP02786 760 aaKnown RBP7.74□□□□□ -1.17
COL4A3-206ENST00000487633 ATP2B4P23634 1241 aa7.74□□□□□ -1.17
COL4A3-206ENST00000487633 IREB2P48200 963 aaKnown RBP7.74□□□□□ -1.17
COL4A3-206ENST00000487633 MDM2Q00987 491 aaPredicted RBP7.74□□□□□ -1.17
COL4A3-206ENST00000487633 TRIM32Q13049 653 aa7.74□□□□□ -1.17
COL4A3-206ENST00000487633 MOGSQ13724 837 aa7.74□□□□□ -1.17
COL4A3-206ENST00000487633 CFAP100Q494V2 611 aa7.74□□□□□ -1.17
COL4A3-206ENST00000487633 HSP90AB3PQ58FF7 597 aa7.74□□□□□ -1.17
COL4A3-206ENST00000487633 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.74□□□□□ -1.17
COL4A3-206ENST00000487633 MYLIPQ8WY64 445 aa7.74□□□□□ -1.17
COL4A3-206ENST00000487633 UBE2OQ9C0C9 1292 aaKnown RBP7.74□□□□□ -1.17
COL4A3-206ENST00000487633 CRISPLD2Q9H0B8 497 aa7.74□□□□□ -1.17
COL4A3-206ENST00000487633 TTYH1Q9H313 450 aaPredicted RBP7.74□□□□□ -1.17
COL4A3-206ENST00000487633 CHPF2Q9P2E5 772 aa7.74□□□□□ -1.17
COL4A3-206ENST00000487633 BIN2Q9UBW5 565 aaPredicted RBP7.74□□□□□ -1.17
COL4A3-206ENST00000487633 LTBP2Q14767 1821 aa7.73□□□□□ -1.17
COL4A3-206ENST00000487633 REV3LO60673 3130 aa7.73□□□□□ -1.17
COL4A3-206ENST00000487633 TMEM265A0A087WTH1 108 aa7.73□□□□□ -1.17
COL4A3-206ENST00000487633 SPDYE2BA6NHP3 402 aa7.73□□□□□ -1.17
COL4A3-206ENST00000487633 FMNL1O95466 1100 aaPredicted RBP7.73□□□□□ -1.17
COL4A3-206ENST00000487633 INHAP05111 366 aa7.73□□□□□ -1.17
COL4A3-206ENST00000487633 SPDYE6P0CI01 402 aa7.73□□□□□ -1.17
COL4A3-206ENST00000487633 CCT4P50991 539 aaKnown RBP7.73□□□□□ -1.17
COL4A3-206ENST00000487633 GTF2A2P52657 109 aa7.73□□□□□ -1.17
COL4A3-206ENST00000487633 DLGAP5Q15398 846 aa7.73□□□□□ -1.17
COL4A3-206ENST00000487633 MAFAQ8NHW3 353 aaPredicted RBP7.73□□□□□ -1.17
COL4A3-206ENST00000487633 ZKSCAN4Q969J2 545 aaPredicted RBP7.73□□□□□ -1.17
COL4A3-206ENST00000487633 FAM122AQ96E09 287 aa7.73□□□□□ -1.17
COL4A3-206ENST00000487633 PLEKHF1Q96S99 279 aa7.73□□□□□ -1.17
COL4A3-206ENST00000487633 TMEM39BQ9GZU3 492 aa7.73□□□□□ -1.17
COL4A3-206ENST00000487633 PAK6Q9NQU5 681 aaPredicted RBP7.73□□□□□ -1.17
COL4A3-206ENST00000487633 PFASO15067 1338 aa7.73□□□□□ -1.17
COL4A3-206ENST00000487633 PTPRFP10586 1907 aa7.72□□□□□ -1.17
COL4A3-206ENST00000487633 TNFRSF10AO00220 468 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms