RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-218ENST00000487565 CANXP27824 592 aaKnown RBP9.78□□□□□ -0.84
GARNL3-218ENST00000487565 RARSP54136 660 aaKnown RBP9.78□□□□□ -0.84
GARNL3-218ENST00000487565 RAB15P59190 212 aa9.78□□□□□ -0.84
GARNL3-218ENST00000487565 ALDH1L2Q3SY69 923 aa9.78□□□□□ -0.84
GARNL3-218ENST00000487565 CCDC30Q5VVM6 783 aa9.78□□□□□ -0.84
GARNL3-218ENST00000487565 BCL2L13Q9BXK5 485 aa9.78□□□□□ -0.84
GARNL3-218ENST00000487565 CCNL1Q9UK58 526 aaPredicted RBP9.78□□□□□ -0.84
GARNL3-218ENST00000487565 NDUFB9Q9Y6M9 179 aa9.78□□□□□ -0.84
GARNL3-218ENST00000487565 ERBB4Q15303 1308 aa9.78□□□□□ -0.84
GARNL3-218ENST00000487565 LY75O60449 1722 aa9.77□□□□□ -0.85
GARNL3-218ENST00000487565 PRAMEF22A3QJZ6 481 aa9.77□□□□□ -0.85
GARNL3-218ENST00000487565 SOCS7O14512 581 aa9.77□□□□□ -0.85
GARNL3-218ENST00000487565 STARD3NLO95772 234 aa9.77□□□□□ -0.85
GARNL3-218ENST00000487565 FBXO45P0C2W1 286 aa9.77□□□□□ -0.85
GARNL3-218ENST00000487565 BMP2P12643 396 aa9.77□□□□□ -0.85
GARNL3-218ENST00000487565 EIF2S2P20042 333 aaKnown RBP9.77□□□□□ -0.85
GARNL3-218ENST00000487565 TREML4Q6UXN2 200 aa9.77□□□□□ -0.85
GARNL3-218ENST00000487565 DNAJC10Q8IXB1 793 aa9.77□□□□□ -0.85
GARNL3-218ENST00000487565 LINC00528Q8N1L1 170 aa9.77□□□□□ -0.85
GARNL3-218ENST00000487565 SSH1Q8WYL5 1049 aa9.77□□□□□ -0.85
GARNL3-218ENST00000487565 TEX13AQ9BXU3 409 aaPredicted RBP9.77□□□□□ -0.85
GARNL3-218ENST00000487565 PCDHB9Q9Y5E1 797 aa9.77□□□□□ -0.85
GARNL3-218ENST00000487565 TCERG1O14776 1098 aaKnown RBP9.76□□□□□ -0.85
GARNL3-218ENST00000487565 APBA3O96018 575 aa9.76□□□□□ -0.85
GARNL3-218ENST00000487565 SF3B2Q13435 895 aaKnown RBP9.76□□□□□ -0.85
GARNL3-218ENST00000487565 CHPF2Q9P2E5 772 aa9.76□□□□□ -0.85
GARNL3-218ENST00000487565 EP400Q96L91 3159 aa9.76□□□□□ -0.85
GARNL3-218ENST00000487565 COL5A3P25940 1745 aaPredicted RBP9.76□□□□□ -0.85
GARNL3-218ENST00000487565 KAT6BQ8WYB5 2073 aa9.75□□□□□ -0.85
GARNL3-218ENST00000487565 RREB1Q92766 1687 aa9.75□□□□□ -0.85
GARNL3-218ENST00000487565 WFS1O76024 890 aa9.75□□□□□ -0.85
GARNL3-218ENST00000487565 CBLBQ13191 982 aa9.75□□□□□ -0.85
GARNL3-218ENST00000487565 ITPK1Q13572 414 aa9.75□□□□□ -0.85
GARNL3-218ENST00000487565 SLC27A3Q5K4L6 730 aa9.75□□□□□ -0.85
GARNL3-218ENST00000487565 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.75□□□□□ -0.85
GARNL3-218ENST00000487565 SLC4A9Q96Q91 983 aa9.75□□□□□ -0.85
GARNL3-218ENST00000487565 DBF4Q9UBU7 674 aaPredicted RBP9.75□□□□□ -0.85
GARNL3-218ENST00000487565 TERTO14746 1132 aaKnown RBP9.74□□□□□ -0.85
GARNL3-218ENST00000487565 BCAR3O75815 825 aa9.74□□□□□ -0.85
GARNL3-218ENST00000487565 CYP19A1P11511 503 aaPredicted RBP9.74□□□□□ -0.85
GARNL3-218ENST00000487565 BAG6P46379 1132 aa9.74□□□□□ -0.85
GARNL3-218ENST00000487565 RRP1P56182 461 aaKnown RBP9.74□□□□□ -0.85
GARNL3-218ENST00000487565 FRAT1Q92837 279 aaPredicted RBP9.74□□□□□ -0.85
GARNL3-218ENST00000487565 TSEN34Q9BSV6 310 aaKnown RBP9.74□□□□□ -0.85
GARNL3-218ENST00000487565 DDX21Q9NR30 783 aaKnown RBP eCLIP9.74□□□□□ -0.85
GARNL3-218ENST00000487565 CCDC87Q9NVE4 849 aa9.74□□□□□ -0.85
GARNL3-218ENST00000487565 USP16Q9Y5T5 823 aa9.74□□□□□ -0.85
GARNL3-218ENST00000487565 CNTNAP4Q9C0A0 1308 aa9.74□□□□□ -0.85
GARNL3-218ENST00000487565 PLSCR1O15162 318 aa9.73□□□□□ -0.85
GARNL3-218ENST00000487565 MYL6BP14649 208 aa9.73□□□□□ -0.85
GARNL3-218ENST00000487565 HMGB2P26583 209 aaKnown RBP9.73□□□□□ -0.85
GARNL3-218ENST00000487565 CRKLP46109 303 aaKnown RBP9.73□□□□□ -0.85
GARNL3-218ENST00000487565 NR1H3Q13133 447 aa9.73□□□□□ -0.85
GARNL3-218ENST00000487565 PROSER3Q2NL68 480 aa9.73□□□□□ -0.85
GARNL3-218ENST00000487565 LINC00116Q8NCU8 138 aa9.73□□□□□ -0.85
GARNL3-218ENST00000487565 HYPKQ9NX55 129 aa9.73□□□□□ -0.85
GARNL3-218ENST00000487565 ZNF330Q9Y3S2 320 aaPredicted RBP9.73□□□□□ -0.85
GARNL3-218ENST00000487565 C4BP0C0L5 1744 aa9.73□□□□□ -0.85
GARNL3-218ENST00000487565 SOBPA7XYQ1 873 aa9.72□□□□□ -0.85
GARNL3-218ENST00000487565 ESPNB1AK53 854 aa9.72□□□□□ -0.85
GARNL3-218ENST00000487565 IPO8O15397 1037 aaKnown RBP9.72□□□□□ -0.85
GARNL3-218ENST00000487565 MAN1A2O60476 641 aa9.72□□□□□ -0.85
GARNL3-218ENST00000487565 ANXA1P04083 346 aa9.72□□□□□ -0.85
GARNL3-218ENST00000487565 A1BGP04217 495 aa9.72□□□□□ -0.85
GARNL3-218ENST00000487565 NEFLP07196 543 aa9.72□□□□□ -0.85
GARNL3-218ENST00000487565 PIP4K2AP48426 406 aaPredicted RBP9.72□□□□□ -0.85
GARNL3-218ENST00000487565 KCNQ4P56696 695 aa9.72□□□□□ -0.85
GARNL3-218ENST00000487565 NFX1Q12986 1120 aaKnown RBP9.72□□□□□ -0.85
GARNL3-218ENST00000487565 FLIIQ13045 1269 aa9.72□□□□□ -0.85
GARNL3-218ENST00000487565 TXNRD1Q16881 649 aa9.72□□□□□ -0.85
GARNL3-218ENST00000487565 ZKSCAN2Q63HK3 967 aa9.72□□□□□ -0.85
GARNL3-218ENST00000487565 Q6ZVU0 165 aa9.72□□□□□ -0.85
GARNL3-218ENST00000487565 NPM2Q86SE8 214 aaKnown RBP9.72□□□□□ -0.85
GARNL3-218ENST00000487565 API5Q9BZZ5 524 aaKnown RBP9.72□□□□□ -0.85
GARNL3-218ENST00000487565 TMPRSS4Q9NRS4 437 aa9.72□□□□□ -0.85
GARNL3-218ENST00000487565 ZBTB1Q9Y2K1 713 aa9.72□□□□□ -0.85
GARNL3-218ENST00000487565 SUPT16HQ9Y5B9 1047 aaKnown RBP9.72□□□□□ -0.85
GARNL3-218ENST00000487565 PTPRCP08575 1304 aa9.72□□□□□ -0.85
GARNL3-218ENST00000487565 PXDNLA1KZ92 1463 aa9.72□□□□□ -0.85
GARNL3-218ENST00000487565 ERVH48-1M5A8F1 160 aa9.71□□□□□ -0.86
GARNL3-218ENST00000487565 GPR37L1O60883 481 aa9.71□□□□□ -0.86
GARNL3-218ENST00000487565 FKBP5Q13451 457 aaPredicted RBP9.71□□□□□ -0.86
GARNL3-218ENST00000487565 NBPF10Q6P3W6 841 aaKnown RBP9.71□□□□□ -0.86
GARNL3-218ENST00000487565 CCDC125Q86Z20 511 aa9.71□□□□□ -0.86
GARNL3-218ENST00000487565 FTSJ3Q8IY81 847 aaKnown RBP9.71□□□□□ -0.86
GARNL3-218ENST00000487565 NBPF15Q8N660 670 aa9.71□□□□□ -0.86
GARNL3-218ENST00000487565 PRM3Q9NNZ6 103 aa9.71□□□□□ -0.86
GARNL3-218ENST00000487565 NXF1Q9UBU9 619 aaKnown RBP9.71□□□□□ -0.86
GARNL3-218ENST00000487565 NOB1Q9ULX3 412 aaKnown RBP9.71□□□□□ -0.86
GARNL3-218ENST00000487565 RNF123Q5XPI4 1314 aa9.71□□□□□ -0.86
GARNL3-218ENST00000487565 COL15A1P39059 1388 aa9.71□□□□□ -0.86
GARNL3-218ENST00000487565 DDX58O95786 925 aaKnown RBP9.7□□□□□ -0.86
GARNL3-218ENST00000487565 IL6STP40189 918 aaPredicted RBP9.7□□□□□ -0.86
GARNL3-218ENST00000487565 INTS5Q6P9B9 1019 aaKnown RBP9.7□□□□□ -0.86
GARNL3-218ENST00000487565 ATF7IPQ6VMQ6 1270 aa9.7□□□□□ -0.86
GARNL3-218ENST00000487565 KIF6Q6ZMV9 814 aa9.7□□□□□ -0.86
GARNL3-218ENST00000487565 G2E3Q7L622 706 aa9.7□□□□□ -0.86
GARNL3-218ENST00000487565 ZNF784Q8NCA9 323 aaPredicted RBP9.7□□□□□ -0.86
GARNL3-218ENST00000487565 XAGE3Q8WTP9 111 aa9.7□□□□□ -0.86
GARNL3-218ENST00000487565 PHAXQ9H814 394 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms