RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 HELBQ8NG08 1087 aaPredicted RBP24.81■■□□□ 1.56
SMPDL3A-202ENST00000487215 ALDH1A1P00352 501 aa24.8■■□□□ 1.56
SMPDL3A-202ENST00000487215 PPP2R3BQ9Y5P8 575 aa24.8■■□□□ 1.56
SMPDL3A-202ENST00000487215 A0A1B0GUL6 1792 aa24.8■■□□□ 1.56
SMPDL3A-202ENST00000487215 MANSC4A6NHS7 340 aaPredicted RBP24.79■■□□□ 1.56
SMPDL3A-202ENST00000487215 F8W031 263 aaPredicted RBP24.79■■□□□ 1.56
SMPDL3A-202ENST00000487215 FOXO4P98177 505 aa24.79■■□□□ 1.56
SMPDL3A-202ENST00000487215 SLC10A4Q96EP9 437 aa24.79■■□□□ 1.56
SMPDL3A-202ENST00000487215 CLMNQ96JQ2 1002 aa24.79■■□□□ 1.56
SMPDL3A-202ENST00000487215 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.79■■□□□ 1.56
SMPDL3A-202ENST00000487215 FANCIQ9NVI1 1328 aa24.79■■□□□ 1.56
SMPDL3A-202ENST00000487215 IL1R1P14778 569 aa24.78■■□□□ 1.56
SMPDL3A-202ENST00000487215 IFIT5Q13325 482 aaKnown RBP24.78■■□□□ 1.56
SMPDL3A-202ENST00000487215 CFAP100Q494V2 611 aa24.78■■□□□ 1.56
SMPDL3A-202ENST00000487215 IFNL1Q8IU54 200 aa24.78■■□□□ 1.56
SMPDL3A-202ENST00000487215 WNK4Q96J92 1243 aa24.78■■□□□ 1.56
SMPDL3A-202ENST00000487215 CLRN2A0PK11 232 aa24.77■■□□□ 1.56
SMPDL3A-202ENST00000487215 SPDYE2BA6NHP3 402 aa24.77■■□□□ 1.56
SMPDL3A-202ENST00000487215 PPP1R12BO60237 982 aaPredicted RBP24.77■■□□□ 1.56
SMPDL3A-202ENST00000487215 SPDYE6P0CI01 402 aa24.77■■□□□ 1.56
SMPDL3A-202ENST00000487215 ZBTB48P10074 688 aaPredicted RBP24.77■■□□□ 1.56
SMPDL3A-202ENST00000487215 INHBEP58166 350 aa24.77■■□□□ 1.56
SMPDL3A-202ENST00000487215 ZNF804AQ7Z570 1209 aa24.77■■□□□ 1.56
SMPDL3A-202ENST00000487215 CHMP3Q9Y3E7 222 aa24.77■■□□□ 1.56
SMPDL3A-202ENST00000487215 MYO1BO43795 1136 aa24.76■■□□□ 1.55
SMPDL3A-202ENST00000487215 FKBP1AP62942 108 aaKnown RBP24.76■■□□□ 1.55
SMPDL3A-202ENST00000487215 PRMT6Q96LA8 375 aaPredicted RBP24.76■■□□□ 1.55
SMPDL3A-202ENST00000487215 JAG2Q9Y219 1238 aa24.76■■□□□ 1.55
SMPDL3A-202ENST00000487215 ECM29Q5VYK3 1845 aa24.76■■□□□ 1.55
SMPDL3A-202ENST00000487215 AOX1Q06278 1338 aa24.76■■□□□ 1.55
SMPDL3A-202ENST00000487215 IGF2BP3O00425 579 aaKnown RBP eCLIP24.75■■□□□ 1.55
SMPDL3A-202ENST00000487215 VAMP4O75379 141 aa24.75■■□□□ 1.55
SMPDL3A-202ENST00000487215 VEZTQ9HBM0 779 aa24.75■■□□□ 1.55
SMPDL3A-202ENST00000487215 F6X3S4 739 aa24.74■■□□□ 1.55
SMPDL3A-202ENST00000487215 SUPT20HL1Q3ZLR7 823 aa24.74■■□□□ 1.55
SMPDL3A-202ENST00000487215 NCBP3Q53F19 620 aaKnown RBP24.74■■□□□ 1.55
SMPDL3A-202ENST00000487215 BEND3Q5T5X7 828 aa24.74■■□□□ 1.55
SMPDL3A-202ENST00000487215 NBPF12Q5TAG4 269 aaPredicted RBP24.74■■□□□ 1.55
SMPDL3A-202ENST00000487215 TRIM17Q9Y577 477 aa24.74■■□□□ 1.55
SMPDL3A-202ENST00000487215 LAMB1P07942 1786 aa24.74■■□□□ 1.55
SMPDL3A-202ENST00000487215 UNCXA6NJT0 531 aa24.73■■□□□ 1.55
SMPDL3A-202ENST00000487215 EPHA10Q5JZY3 1008 aa24.73■■□□□ 1.55
SMPDL3A-202ENST00000487215 LMBR1LQ6UX01 489 aa24.73■■□□□ 1.55
SMPDL3A-202ENST00000487215 OTOP1Q7RTM1 612 aa24.72■■□□□ 1.55
SMPDL3A-202ENST00000487215 ZNF594Q96JF6 807 aaPredicted RBP24.72■■□□□ 1.55
SMPDL3A-202ENST00000487215 GJA5P36382 358 aa24.71■■□□□ 1.55
SMPDL3A-202ENST00000487215 IREB2P48200 963 aaKnown RBP24.71■■□□□ 1.55
SMPDL3A-202ENST00000487215 RBM5P52756 815 aaKnown RBP eCLIP24.71■■□□□ 1.55
SMPDL3A-202ENST00000487215 EXOSC9Q06265 439 aaKnown RBP24.71■■□□□ 1.55
SMPDL3A-202ENST00000487215 RASA3Q14644 834 aa24.71■■□□□ 1.55
SMPDL3A-202ENST00000487215 CACNA1FO60840 1977 aa24.71■■□□□ 1.55
SMPDL3A-202ENST00000487215 PLIN1O60240 522 aa24.7■■□□□ 1.54
SMPDL3A-202ENST00000487215 USP2O75604 605 aaPredicted RBP24.7■■□□□ 1.54
SMPDL3A-202ENST00000487215 CCDC57Q2TAC2 916 aa24.7■■□□□ 1.54
SMPDL3A-202ENST00000487215 LDHAL6AQ6ZMR3 332 aa24.7■■□□□ 1.54
SMPDL3A-202ENST00000487215 FAM205AQ6ZU69 1335 aa24.69■■□□□ 1.54
SMPDL3A-202ENST00000487215 TAF7LQ5H9L4 462 aa24.69■■□□□ 1.54
SMPDL3A-202ENST00000487215 ANKRD13AQ8IZ07 590 aa24.69■■□□□ 1.54
SMPDL3A-202ENST00000487215 CNNM1Q9NRU3 951 aa24.69■■□□□ 1.54
SMPDL3A-202ENST00000487215 GRM8O00222 908 aa24.68■■□□□ 1.54
SMPDL3A-202ENST00000487215 CRHR2Q13324 411 aa24.68■■□□□ 1.54
SMPDL3A-202ENST00000487215 WDR63Q8IWG1 891 aa24.68■■□□□ 1.54
SMPDL3A-202ENST00000487215 SALL2Q9Y467 1007 aaPredicted RBP24.68■■□□□ 1.54
SMPDL3A-202ENST00000487215 HTTP42858 3142 aa24.68■■□□□ 1.54
SMPDL3A-202ENST00000487215 SPDYE2Q495Y8 402 aa24.67■■□□□ 1.54
SMPDL3A-202ENST00000487215 OTUD7BQ6GQQ9 843 aa24.67■■□□□ 1.54
SMPDL3A-202ENST00000487215 CD99L2Q8TCZ2 262 aa24.67■■□□□ 1.54
SMPDL3A-202ENST00000487215 ERO1AQ96HE7 468 aa24.67■■□□□ 1.54
SMPDL3A-202ENST00000487215 TESPA1A2RU30 521 aaPredicted RBP24.66■■□□□ 1.54
SMPDL3A-202ENST00000487215 POTEFA5A3E0 1075 aa24.66■■□□□ 1.54
SMPDL3A-202ENST00000487215 MFSD14BQ5SR56 506 aa24.66■■□□□ 1.54
SMPDL3A-202ENST00000487215 INTS3Q68E01 1043 aaKnown RBP24.66■■□□□ 1.54
SMPDL3A-202ENST00000487215 TDRD7Q8NHU6 1098 aaKnown RBP24.66■■□□□ 1.54
SMPDL3A-202ENST00000487215 PTPN18Q99952 460 aa24.66■■□□□ 1.54
SMPDL3A-202ENST00000487215 ZNF70Q9UC06 446 aaPredicted RBP24.66■■□□□ 1.54
SMPDL3A-202ENST00000487215 TNFAIP1Q13829 316 aa24.65■■□□□ 1.54
SMPDL3A-202ENST00000487215 ELP3Q9H9T3 547 aa24.65■■□□□ 1.54
SMPDL3A-202ENST00000487215 SERPINA10Q9UK55 444 aa24.65■■□□□ 1.54
SMPDL3A-202ENST00000487215 TTF2Q9UNY4 1162 aaKnown RBP24.65■■□□□ 1.54
SMPDL3A-202ENST00000487215 PTPN22Q9Y2R2 807 aa24.65■■□□□ 1.54
SMPDL3A-202ENST00000487215 OTOFQ9HC10 1997 aa24.65■■□□□ 1.54
SMPDL3A-202ENST00000487215 GYG1P46976 350 aa24.64■■□□□ 1.54
SMPDL3A-202ENST00000487215 UBE4AQ14139 1066 aa24.64■■□□□ 1.54
SMPDL3A-202ENST00000487215 CDAN1Q8IWY9 1227 aa24.64■■□□□ 1.54
SMPDL3A-202ENST00000487215 OPTNQ96CV9 577 aa24.64■■□□□ 1.54
SMPDL3A-202ENST00000487215 TDRD3Q9H7E2 651 aaKnown RBP24.64■■□□□ 1.54
SMPDL3A-202ENST00000487215 HIBADHP31937 336 aaKnown RBP24.63■■□□□ 1.53
SMPDL3A-202ENST00000487215 TEPSINQ96N21 525 aa24.63■■□□□ 1.53
SMPDL3A-202ENST00000487215 MRS2Q9HD23 443 aa24.63■■□□□ 1.53
SMPDL3A-202ENST00000487215 SPINK5Q9NQ38 1064 aaPredicted RBP24.63■■□□□ 1.53
SMPDL3A-202ENST00000487215 C9orf78Q9NZ63 289 aaPredicted RBP24.63■■□□□ 1.53
SMPDL3A-202ENST00000487215 ARAP2Q8WZ64 1704 aa24.62■■□□□ 1.53
SMPDL3A-202ENST00000487215 CAP1Q01518 475 aa24.62■■□□□ 1.53
SMPDL3A-202ENST00000487215 SP3Q02447 781 aa24.62■■□□□ 1.53
SMPDL3A-202ENST00000487215 DZIP1LQ8IYY4 767 aaKnown RBP24.62■■□□□ 1.53
SMPDL3A-202ENST00000487215 FAM84BQ96KN1 310 aaPredicted RBP24.62■■□□□ 1.53
SMPDL3A-202ENST00000487215 EFCC1Q9HA90 598 aa24.62■■□□□ 1.53
SMPDL3A-202ENST00000487215 ALDH1L1O75891 902 aa24.61■■□□□ 1.53
SMPDL3A-202ENST00000487215 MS4A4AQ96JQ5 239 aa24.61■■□□□ 1.53
SMPDL3A-202ENST00000487215 PUS3Q9BZE2 481 aaKnown RBP24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms