RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 TNFAIP1Q13829 316 aa9.86□□□□□ -0.83
PDPN-205ENST00000487038 TAF1CQ15572 869 aaPredicted RBP9.86□□□□□ -0.83
PDPN-205ENST00000487038 DUSP27Q5VZP5 1158 aa9.86□□□□□ -0.83
PDPN-205ENST00000487038 MTMR14Q8NCE2 650 aa9.86□□□□□ -0.83
PDPN-205ENST00000487038 OTUD5Q96G74 571 aa9.86□□□□□ -0.83
PDPN-205ENST00000487038 VEZTQ9HBM0 779 aa9.86□□□□□ -0.83
PDPN-205ENST00000487038 PTCH2Q9Y6C5 1203 aa9.86□□□□□ -0.83
PDPN-205ENST00000487038 CACNA1FO60840 1977 aa9.85□□□□□ -0.83
PDPN-205ENST00000487038 GNRH1P01148 92 aa9.85□□□□□ -0.83
PDPN-205ENST00000487038 PRMT2P55345 433 aa9.85□□□□□ -0.83
PDPN-205ENST00000487038 NEXNQ0ZGT2 675 aa9.85□□□□□ -0.83
PDPN-205ENST00000487038 SLC17A8Q8NDX2 589 aa9.85□□□□□ -0.83
PDPN-205ENST00000487038 OPTNQ96CV9 577 aa9.85□□□□□ -0.83
PDPN-205ENST00000487038 MPHOSPH8Q99549 860 aa9.85□□□□□ -0.83
PDPN-205ENST00000487038 HTATIP2Q9BUP3 242 aa9.85□□□□□ -0.83
PDPN-205ENST00000487038 METTL22Q9BUU2 404 aaPredicted RBP9.85□□□□□ -0.83
PDPN-205ENST00000487038 GREM2Q9H772 168 aa9.85□□□□□ -0.83
PDPN-205ENST00000487038 PHAXQ9H814 394 aaKnown RBP9.85□□□□□ -0.83
PDPN-205ENST00000487038 CCL15-CCL14A0A0B4J2E2 113 aa9.84□□□□□ -0.83
PDPN-205ENST00000487038 GTF2A2P52657 109 aa9.84□□□□□ -0.83
PDPN-205ENST00000487038 CCL15Q16663 113 aa9.84□□□□□ -0.83
PDPN-205ENST00000487038 CFAP100Q494V2 611 aa9.84□□□□□ -0.83
PDPN-205ENST00000487038 TTLL11Q8NHH1 800 aa9.84□□□□□ -0.83
PDPN-205ENST00000487038 NKX2-3Q8TAU0 364 aa9.84□□□□□ -0.83
PDPN-205ENST00000487038 DPF3Q92784 378 aa9.84□□□□□ -0.83
PDPN-205ENST00000487038 ELP3Q9H9T3 547 aa9.84□□□□□ -0.83
PDPN-205ENST00000487038 MYH13Q9UKX3 1938 aa9.84□□□□□ -0.83
PDPN-205ENST00000487038 CLRN2A0PK11 232 aa9.83□□□□□ -0.84
PDPN-205ENST00000487038 SPDYE2BA6NHP3 402 aa9.83□□□□□ -0.84
PDPN-205ENST00000487038 USP2O75604 605 aaPredicted RBP9.83□□□□□ -0.84
PDPN-205ENST00000487038 MYCP01106 439 aaPredicted RBP9.83□□□□□ -0.84
PDPN-205ENST00000487038 SPDYE6P0CI01 402 aa9.83□□□□□ -0.84
PDPN-205ENST00000487038 GJA5P36382 358 aa9.83□□□□□ -0.84
PDPN-205ENST00000487038 RBM5P52756 815 aaKnown RBP eCLIP9.83□□□□□ -0.84
PDPN-205ENST00000487038 FKBP1AP62942 108 aaKnown RBP9.83□□□□□ -0.84
PDPN-205ENST00000487038 NBPF12Q5TAG4 269 aaPredicted RBP9.83□□□□□ -0.84
PDPN-205ENST00000487038 ZNF804AQ7Z570 1209 aa9.83□□□□□ -0.84
PDPN-205ENST00000487038 TXNRD3Q86VQ6 643 aa9.83□□□□□ -0.84
PDPN-205ENST00000487038 CCDC146Q8IYE0 955 aa9.83□□□□□ -0.84
PDPN-205ENST00000487038 JARID2Q92833 1246 aaPredicted RBP9.83□□□□□ -0.84
PDPN-205ENST00000487038 RUNDC1Q96C34 613 aa9.83□□□□□ -0.84
PDPN-205ENST00000487038 PTPN18Q99952 460 aa9.83□□□□□ -0.84
PDPN-205ENST00000487038 CD209Q9NNX6 404 aa9.83□□□□□ -0.84
PDPN-205ENST00000487038 ZCCHC17Q9NP64 241 aaKnown RBP9.83□□□□□ -0.84
PDPN-205ENST00000487038 MBIPQ9NS73 344 aa9.83□□□□□ -0.84
PDPN-205ENST00000487038 RBM27Q9P2N5 1060 aaKnown RBP9.83□□□□□ -0.84
PDPN-205ENST00000487038 TRIM35Q9UPQ4 493 aa9.83□□□□□ -0.84
PDPN-205ENST00000487038 MAP3K2Q9Y2U5 619 aa9.83□□□□□ -0.84
PDPN-205ENST00000487038 CSADQ9Y600 493 aa9.83□□□□□ -0.84
PDPN-205ENST00000487038 A0A1W2PPC1 479 aa9.82□□□□□ -0.84
PDPN-205ENST00000487038 WTIPA6NIX2 430 aaPredicted RBP9.82□□□□□ -0.84
PDPN-205ENST00000487038 F8W031 263 aaPredicted RBP9.82□□□□□ -0.84
PDPN-205ENST00000487038 TNNI2P48788 182 aa9.82□□□□□ -0.84
PDPN-205ENST00000487038 CALD1Q05682 793 aaKnown RBP9.82□□□□□ -0.84
PDPN-205ENST00000487038 RASA3Q14644 834 aa9.82□□□□□ -0.84
PDPN-205ENST00000487038 WDR43Q15061 677 aaKnown RBP eCLIP9.82□□□□□ -0.84
PDPN-205ENST00000487038 CCDC30Q5VVM6 783 aa9.82□□□□□ -0.84
PDPN-205ENST00000487038 SH3TC2Q8TF17 1288 aa9.82□□□□□ -0.84
PDPN-205ENST00000487038 NR2E3Q9Y5X4 410 aa9.82□□□□□ -0.84
PDPN-205ENST00000487038 TLR2O60603 784 aa9.81□□□□□ -0.84
PDPN-205ENST00000487038 ITGA6P23229 1130 aa9.81□□□□□ -0.84
PDPN-205ENST00000487038 KLRK1P26718 216 aa9.81□□□□□ -0.84
PDPN-205ENST00000487038 GNAI1P63096 354 aa9.81□□□□□ -0.84
PDPN-205ENST00000487038 LACTBP83111 547 aaPredicted RBP9.81□□□□□ -0.84
PDPN-205ENST00000487038 CAP1Q01518 475 aa9.81□□□□□ -0.84
PDPN-205ENST00000487038 RALBP1Q15311 655 aa9.81□□□□□ -0.84
PDPN-205ENST00000487038 BRI3BPQ8WY22 251 aa9.81□□□□□ -0.84
PDPN-205ENST00000487038 MS4A4AQ96JQ5 239 aa9.81□□□□□ -0.84
PDPN-205ENST00000487038 AK9Q5TCS8 1911 aa9.8□□□□□ -0.84
PDPN-205ENST00000487038 CETPP11597 493 aa9.8□□□□□ -0.84
PDPN-205ENST00000487038 HOXD10P28358 340 aa9.8□□□□□ -0.84
PDPN-205ENST00000487038 CHRNDQ07001 517 aa9.8□□□□□ -0.84
PDPN-205ENST00000487038 VGLL4Q14135 290 aa9.8□□□□□ -0.84
PDPN-205ENST00000487038 KSR2Q6VAB6 950 aa9.8□□□□□ -0.84
PDPN-205ENST00000487038 CERS5Q8N5B7 392 aa9.8□□□□□ -0.84
PDPN-205ENST00000487038 PRMT6Q96LA8 375 aaPredicted RBP9.8□□□□□ -0.84
PDPN-205ENST00000487038 IFT57Q9NWB7 429 aa9.8□□□□□ -0.84
PDPN-205ENST00000487038 UNC80Q8N2C7 3258 aa9.8□□□□□ -0.84
PDPN-205ENST00000487038 ANKRD18BA2A2Z9 1011 aa9.79□□□□□ -0.84
PDPN-205ENST00000487038 PI4KAP2A4QPH2 592 aa9.79□□□□□ -0.84
PDPN-205ENST00000487038 SPDYE5A6NIY4 337 aa9.79□□□□□ -0.84
PDPN-205ENST00000487038 NEURL1BA8MQ27 555 aa9.79□□□□□ -0.84
PDPN-205ENST00000487038 ELL2O00472 640 aaPredicted RBP9.79□□□□□ -0.84
PDPN-205ENST00000487038 IGKV5-2P06315 115 aa9.79□□□□□ -0.84
PDPN-205ENST00000487038 IL1R1P14778 569 aa9.79□□□□□ -0.84
PDPN-205ENST00000487038 MNX1P50219 401 aaPredicted RBP9.79□□□□□ -0.84
PDPN-205ENST00000487038 UBXN2AP68543 259 aa9.79□□□□□ -0.84
PDPN-205ENST00000487038 MAP3K9P80192 1104 aa9.79□□□□□ -0.84
PDPN-205ENST00000487038 SPDYE2Q495Y8 402 aa9.79□□□□□ -0.84
PDPN-205ENST00000487038 C15orf52Q6ZUT6 534 aaKnown RBP9.79□□□□□ -0.84
PDPN-205ENST00000487038 UBE3BQ7Z3V4 1068 aa9.79□□□□□ -0.84
PDPN-205ENST00000487038 FAM43AQ8N2R8 423 aa9.79□□□□□ -0.84
PDPN-205ENST00000487038 PI4KAP1Q8N8J0 262 aa9.79□□□□□ -0.84
PDPN-205ENST00000487038 HELBQ8NG08 1087 aaPredicted RBP9.79□□□□□ -0.84
PDPN-205ENST00000487038 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.79□□□□□ -0.84
PDPN-205ENST00000487038 RAET1EQ8TD07 263 aa9.79□□□□□ -0.84
PDPN-205ENST00000487038 SHISA4Q96DD7 197 aa9.79□□□□□ -0.84
PDPN-205ENST00000487038 HOOK2Q96ED9 719 aa9.79□□□□□ -0.84
PDPN-205ENST00000487038 PLA2G12BQ9BX93 195 aa9.79□□□□□ -0.84
PDPN-205ENST00000487038 STK31Q9BXU1 1019 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms