RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 FAM84BQ96KN1 310 aaPredicted RBP13.87□□□□□ -0.19
PRKCB-207ENST00000486868 NEK1Q96PY6 1258 aa13.87□□□□□ -0.19
PRKCB-207ENST00000486868 GPAA1O43292 621 aa13.86□□□□□ -0.19
PRKCB-207ENST00000486868 GNAT2P19087 354 aa13.86□□□□□ -0.19
PRKCB-207ENST00000486868 ZNF827Q17R98 1081 aa13.86□□□□□ -0.19
PRKCB-207ENST00000486868 POTEAQ6S8J7 498 aa13.86□□□□□ -0.19
PRKCB-207ENST00000486868 PI16Q6UXB8 463 aa13.86□□□□□ -0.19
PRKCB-207ENST00000486868 SPRYD3Q8NCJ5 442 aa13.86□□□□□ -0.19
PRKCB-207ENST00000486868 RPGRQ92834 1020 aaKnown RBP13.86□□□□□ -0.19
PRKCB-207ENST00000486868 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.86□□□□□ -0.19
PRKCB-207ENST00000486868 IRS2Q9Y4H2 1338 aa13.86□□□□□ -0.19
PRKCB-207ENST00000486868 AKAP11Q9UKA4 1901 aa13.86□□□□□ -0.19
PRKCB-207ENST00000486868 IDH1O75874 414 aaKnown RBP13.85□□□□□ -0.19
PRKCB-207ENST00000486868 HIBADHP31937 336 aaKnown RBP13.85□□□□□ -0.19
PRKCB-207ENST00000486868 DDR1Q08345 913 aa13.85□□□□□ -0.19
PRKCB-207ENST00000486868 CHMP4CQ96CF2 233 aa13.85□□□□□ -0.19
PRKCB-207ENST00000486868 GBP4Q96PP9 640 aa13.85□□□□□ -0.19
PRKCB-207ENST00000486868 BRIP1Q9BX63 1249 aa13.85□□□□□ -0.19
PRKCB-207ENST00000486868 PUS7LQ9H0K6 701 aaKnown RBP13.85□□□□□ -0.19
PRKCB-207ENST00000486868 XDHP47989 1333 aa13.85□□□□□ -0.19
PRKCB-207ENST00000486868 PNPLA7Q6ZV29 1317 aa13.85□□□□□ -0.19
PRKCB-207ENST00000486868 ZNF532Q9HCE3 1301 aa13.85□□□□□ -0.19
PRKCB-207ENST00000486868 SNAP23O00161 211 aa13.84□□□□□ -0.19
PRKCB-207ENST00000486868 CHGBP05060 677 aa13.84□□□□□ -0.19
PRKCB-207ENST00000486868 ATP2B4P23634 1241 aa13.84□□□□□ -0.19
PRKCB-207ENST00000486868 IMMTQ16891 758 aaKnown RBP13.84□□□□□ -0.19
PRKCB-207ENST00000486868 DHX32Q7L7V1 743 aaKnown RBP13.84□□□□□ -0.19
PRKCB-207ENST00000486868 VPS37DQ86XT2 251 aa13.84□□□□□ -0.19
PRKCB-207ENST00000486868 COL23A1Q86Y22 540 aaPredicted RBP13.84□□□□□ -0.19
PRKCB-207ENST00000486868 AGXT2Q9BYV1 514 aa13.84□□□□□ -0.19
PRKCB-207ENST00000486868 PODXL2Q9NZ53 605 aa13.84□□□□□ -0.19
PRKCB-207ENST00000486868 WDR19Q8NEZ3 1342 aa13.84□□□□□ -0.19
PRKCB-207ENST00000486868 DDX11L8A8MPP1 907 aa13.83□□□□□ -0.2
PRKCB-207ENST00000486868 FOXP2O15409 715 aa13.83□□□□□ -0.2
PRKCB-207ENST00000486868 FGAP02671 866 aa13.83□□□□□ -0.2
PRKCB-207ENST00000486868 MCM4P33991 863 aa13.83□□□□□ -0.2
PRKCB-207ENST00000486868 NBR1Q14596 966 aa13.83□□□□□ -0.2
PRKCB-207ENST00000486868 CAMKK2Q96RR4 588 aa13.83□□□□□ -0.2
PRKCB-207ENST00000486868 STRBPQ96SI9 672 aaKnown RBP13.83□□□□□ -0.2
PRKCB-207ENST00000486868 WWC3Q9ULE0 1092 aa13.83□□□□□ -0.2
PRKCB-207ENST00000486868 SALL1Q9NSC2 1324 aa13.83□□□□□ -0.2
PRKCB-207ENST00000486868 COL4A1P02462 1669 aa13.82□□□□□ -0.2
PRKCB-207ENST00000486868 PATL2C9JE40 543 aaKnown RBP13.82□□□□□ -0.2
PRKCB-207ENST00000486868 FRAT2O75474 233 aaPredicted RBP13.82□□□□□ -0.2
PRKCB-207ENST00000486868 GYG1P46976 350 aa13.82□□□□□ -0.2
PRKCB-207ENST00000486868 EXOSC10Q01780 885 aaKnown RBP13.82□□□□□ -0.2
PRKCB-207ENST00000486868 ZGPATQ8N5A5 531 aaKnown RBP13.82□□□□□ -0.2
PRKCB-207ENST00000486868 TNPO1Q92973 898 aaKnown RBP13.82□□□□□ -0.2
PRKCB-207ENST00000486868 AIDAQ96BJ3 306 aa13.82□□□□□ -0.2
PRKCB-207ENST00000486868 LRP2BPQ9P2M1 347 aa13.82□□□□□ -0.2
PRKCB-207ENST00000486868 E7EWF7 191 aa13.81□□□□□ -0.2
PRKCB-207ENST00000486868 PDE6BP35913 854 aa13.81□□□□□ -0.2
PRKCB-207ENST00000486868 SLFNL1Q499Z3 407 aa13.81□□□□□ -0.2
PRKCB-207ENST00000486868 SPTY2D1Q68D10 685 aaPredicted RBP13.81□□□□□ -0.2
PRKCB-207ENST00000486868 SP8Q8IXZ3 490 aa13.81□□□□□ -0.2
PRKCB-207ENST00000486868 MAGEB6Q8N7X4 407 aa13.81□□□□□ -0.2
PRKCB-207ENST00000486868 TNRC6CQ9HCJ0 1690 aaKnown RBP13.8□□□□□ -0.2
PRKCB-207ENST00000486868 ZNF213O14771 459 aa13.8□□□□□ -0.2
PRKCB-207ENST00000486868 BRD1O95696 1058 aa13.8□□□□□ -0.2
PRKCB-207ENST00000486868 NPR1P16066 1061 aa13.8□□□□□ -0.2
PRKCB-207ENST00000486868 ALDH1B1P30837 517 aa13.8□□□□□ -0.2
PRKCB-207ENST00000486868 EVCP57679 992 aa13.8□□□□□ -0.2
PRKCB-207ENST00000486868 TOB2Q14106 344 aaPredicted RBP13.8□□□□□ -0.2
PRKCB-207ENST00000486868 GIMAP6Q6P9H5 292 aa13.8□□□□□ -0.2
PRKCB-207ENST00000486868 STOX1Q6ZVD7 989 aa13.8□□□□□ -0.2
PRKCB-207ENST00000486868 CCDC24Q8N4L8 307 aa13.8□□□□□ -0.2
PRKCB-207ENST00000486868 TDRD7Q8NHU6 1098 aaKnown RBP13.8□□□□□ -0.2
PRKCB-207ENST00000486868 WDR66Q8TBY9 1149 aa13.8□□□□□ -0.2
PRKCB-207ENST00000486868 MTA3Q9BTC8 594 aa13.8□□□□□ -0.2
PRKCB-207ENST00000486868 NACAP1Q9BZK3 213 aa13.8□□□□□ -0.2
PRKCB-207ENST00000486868 PARP3Q9Y6F1 533 aa13.8□□□□□ -0.2
PRKCB-207ENST00000486868 NRXN2Q9P2S2 1712 aa13.8□□□□□ -0.2
PRKCB-207ENST00000486868 TNS1Q9HBL0 1735 aaKnown RBP13.79□□□□□ -0.2
PRKCB-207ENST00000486868 A0A1B0GUL6 1792 aa13.79□□□□□ -0.2
PRKCB-207ENST00000486868 NT5C2P49902 561 aa13.79□□□□□ -0.2
PRKCB-207ENST00000486868 SLC15A2Q16348 729 aa13.79□□□□□ -0.2
PRKCB-207ENST00000486868 ME3Q16798 604 aa13.79□□□□□ -0.2
PRKCB-207ENST00000486868 ZNF804AQ7Z570 1209 aa13.79□□□□□ -0.2
PRKCB-207ENST00000486868 ILDR1Q86SU0 546 aaPredicted RBP13.79□□□□□ -0.2
PRKCB-207ENST00000486868 CERS3Q8IU89 383 aa13.79□□□□□ -0.2
PRKCB-207ENST00000486868 FOXD4L1Q9NU39 408 aa13.79□□□□□ -0.2
PRKCB-207ENST00000486868 STK32BQ9NY57 414 aa13.79□□□□□ -0.2
PRKCB-207ENST00000486868 ANKIB1Q9P2G1 1089 aa13.79□□□□□ -0.2
PRKCB-207ENST00000486868 GGA1Q9UJY5 639 aa13.79□□□□□ -0.2
PRKCB-207ENST00000486868 TPCN1Q9ULQ1 816 aa13.79□□□□□ -0.2
PRKCB-207ENST00000486868 TAF6LQ9Y6J9 622 aa13.79□□□□□ -0.2
PRKCB-207ENST00000486868 DOCK2Q92608 1830 aa13.78□□□□□ -0.2
PRKCB-207ENST00000486868 GOLGA6L22H0YM25 854 aa13.78□□□□□ -0.2
PRKCB-207ENST00000486868 SRGNP10124 158 aa13.78□□□□□ -0.2
PRKCB-207ENST00000486868 CPA1P15085 419 aa13.78□□□□□ -0.2
PRKCB-207ENST00000486868 CYP7A1P22680 504 aa13.78□□□□□ -0.2
PRKCB-207ENST00000486868 NCOA7Q8NI08 942 aa13.78□□□□□ -0.2
PRKCB-207ENST00000486868 ZNF274Q96GC6 653 aaPredicted RBP13.78□□□□□ -0.2
PRKCB-207ENST00000486868 LLPHQ9BRT6 129 aaKnown RBP13.78□□□□□ -0.2
PRKCB-207ENST00000486868 SMC3Q9UQE7 1217 aa13.78□□□□□ -0.2
PRKCB-207ENST00000486868 ATP6V0A2Q9Y487 856 aa13.78□□□□□ -0.2
PRKCB-207ENST00000486868 WDR33Q9C0J8 1336 aaKnown RBP13.78□□□□□ -0.2
PRKCB-207ENST00000486868 GSG1L2A8MUP6 293 aa13.77□□□□□ -0.21
PRKCB-207ENST00000486868 MBD4O95243 580 aa13.77□□□□□ -0.21
PRKCB-207ENST00000486868 COL1A1P02452 1464 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms