RNA–Protein interactions for RNA: ENST00000486758.5

SHROOM3-208, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 3,766 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-208ENST00000486758 TTC14Q96N46 770 aa14.28□□□□□ -0.12
SHROOM3-208ENST00000486758 ADCY9O60503 1353 aa14.28□□□□□ -0.12
SHROOM3-208ENST00000486758 SLC3A2P08195 630 aaKnown RBP14.27□□□□□ -0.12
SHROOM3-208ENST00000486758 PI16Q6UXB8 463 aa14.27□□□□□ -0.12
SHROOM3-208ENST00000486758 CCDC102AQ96A19 550 aa14.27□□□□□ -0.12
SHROOM3-208ENST00000486758 SALL3Q9BXA9 1300 aa14.27□□□□□ -0.12
SHROOM3-208ENST00000486758 ZCCHC17Q9NP64 241 aaKnown RBP14.27□□□□□ -0.13
SHROOM3-208ENST00000486758 TRMT112Q9UI30 125 aaKnown RBP14.27□□□□□ -0.13
SHROOM3-208ENST00000486758 KLF18A0A0U1RQI7 1052 aa14.27□□□□□ -0.13
SHROOM3-208ENST00000486758 A0A1B0GUL7 405 aa14.27□□□□□ -0.13
SHROOM3-208ENST00000486758 NEMFO60524 1076 aa14.27□□□□□ -0.13
SHROOM3-208ENST00000486758 KARSQ15046 597 aaKnown RBP14.27□□□□□ -0.13
SHROOM3-208ENST00000486758 ZCRB1Q8TBF4 217 aaKnown RBP14.27□□□□□ -0.13
SHROOM3-208ENST00000486758 XPO4Q9C0E2 1151 aaKnown RBP14.27□□□□□ -0.13
SHROOM3-208ENST00000486758 PTPDC1A2A3K4 754 aa14.26□□□□□ -0.13
SHROOM3-208ENST00000486758 IMMTQ16891 758 aaKnown RBP14.26□□□□□ -0.13
SHROOM3-208ENST00000486758 OLFM4Q6UX06 510 aa14.26□□□□□ -0.13
SHROOM3-208ENST00000486758 VPS37DQ86XT2 251 aa14.26□□□□□ -0.13
SHROOM3-208ENST00000486758 IPO4Q8TEX9 1081 aaKnown RBP14.26□□□□□ -0.13
SHROOM3-208ENST00000486758 C8orf76Q96K31 380 aa14.26□□□□□ -0.13
SHROOM3-208ENST00000486758 ZSWIM6Q9HCJ5 1215 aa14.26□□□□□ -0.13
SHROOM3-208ENST00000486758 NEURL4Q96JN8 1562 aa14.26□□□□□ -0.13
SHROOM3-208ENST00000486758 TOP1P11387 765 aaKnown RBP14.26□□□□□ -0.13
SHROOM3-208ENST00000486758 LEKR1Q6ZMV7 388 aa14.26□□□□□ -0.13
SHROOM3-208ENST00000486758 CCDC191Q8NCU4 936 aa14.26□□□□□ -0.13
SHROOM3-208ENST00000486758 RASSF8Q8NHQ8 419 aa14.26□□□□□ -0.13
SHROOM3-208ENST00000486758 PGBD1Q96JS3 809 aa14.26□□□□□ -0.13
SHROOM3-208ENST00000486758 QTRT2Q9H974 415 aaKnown RBP14.26□□□□□ -0.13
SHROOM3-208ENST00000486758 GPHNQ9NQX3 736 aaPredicted RBP14.26□□□□□ -0.13
SHROOM3-208ENST00000486758 KIF20BQ96Q89 1820 aa14.26□□□□□ -0.13
SHROOM3-208ENST00000486758 PHKG2P15735 406 aa14.26□□□□□ -0.13
SHROOM3-208ENST00000486758 GSDMDP57764 484 aa14.26□□□□□ -0.13
SHROOM3-208ENST00000486758 USP28Q96RU2 1077 aa14.26□□□□□ -0.13
SHROOM3-208ENST00000486758 ORC3Q9UBD5 711 aaPredicted RBP14.26□□□□□ -0.13
SHROOM3-208ENST00000486758 IRX5P78411 483 aaPredicted RBP14.25□□□□□ -0.13
SHROOM3-208ENST00000486758 LRRFIP1Q32MZ4 808 aaKnown RBP14.25□□□□□ -0.13
SHROOM3-208ENST00000486758 USP31Q70CQ4 1352 aa14.25□□□□□ -0.13
SHROOM3-208ENST00000486758 HOXB7P09629 217 aa14.25□□□□□ -0.13
SHROOM3-208ENST00000486758 FAM193AP78312 1265 aa14.25□□□□□ -0.13
SHROOM3-208ENST00000486758 HSP90B2PQ58FF3 399 aa14.25□□□□□ -0.13
SHROOM3-208ENST00000486758 KDRP35968 1356 aa14.25□□□□□ -0.13
SHROOM3-208ENST00000486758 UBASH3AP57075 661 aa14.25□□□□□ -0.13
SHROOM3-208ENST00000486758 EVCP57679 992 aa14.25□□□□□ -0.13
SHROOM3-208ENST00000486758 KLHL10Q6JEL2 608 aa14.25□□□□□ -0.13
SHROOM3-208ENST00000486758 AK7Q96M32 723 aa14.25□□□□□ -0.13
SHROOM3-208ENST00000486758 KIF2AO00139 706 aaPredicted RBP14.24□□□□□ -0.13
SHROOM3-208ENST00000486758 ZNF213O14771 459 aa14.24□□□□□ -0.13
SHROOM3-208ENST00000486758 HNRNPH2P55795 449 aaKnown RBP14.24□□□□□ -0.13
SHROOM3-208ENST00000486758 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.24□□□□□ -0.13
SHROOM3-208ENST00000486758 TDRD7Q8NHU6 1098 aaKnown RBP14.24□□□□□ -0.13
SHROOM3-208ENST00000486758 DCAF5Q96JK2 942 aa14.24□□□□□ -0.13
SHROOM3-208ENST00000486758 MPHOSPH8Q99549 860 aa14.24□□□□□ -0.13
SHROOM3-208ENST00000486758 GJB4Q9NTQ9 266 aa14.24□□□□□ -0.13
SHROOM3-208ENST00000486758 AOX1Q06278 1338 aa14.24□□□□□ -0.13
SHROOM3-208ENST00000486758 MINDY4BA8MYZ0 360 aa14.24□□□□□ -0.13
SHROOM3-208ENST00000486758 CTIFO43310 598 aaKnown RBP14.24□□□□□ -0.13
SHROOM3-208ENST00000486758 CYP21A2P08686 494 aa14.24□□□□□ -0.13
SHROOM3-208ENST00000486758 FUCA2Q9BTY2 467 aa14.24□□□□□ -0.13
SHROOM3-208ENST00000486758 PUF60Q9UHX1 559 aaKnown RBP14.24□□□□□ -0.13
SHROOM3-208ENST00000486758 CTAGE5O15320 804 aa14.24□□□□□ -0.13
SHROOM3-208ENST00000486758 SLFN14P0C7P3 912 aa14.24□□□□□ -0.13
SHROOM3-208ENST00000486758 MAP4K1Q92918 833 aa14.24□□□□□ -0.13
SHROOM3-208ENST00000486758 MYL10Q9BUA6 226 aa14.24□□□□□ -0.13
SHROOM3-208ENST00000486758 CASQ1P31415 396 aa14.23□□□□□ -0.13
SHROOM3-208ENST00000486758 AKAP17AQ02040 695 aaKnown RBP14.23□□□□□ -0.13
SHROOM3-208ENST00000486758 SYNE4Q8N205 404 aa14.23□□□□□ -0.13
SHROOM3-208ENST00000486758 MRPS27Q92552 414 aaKnown RBP14.23□□□□□ -0.13
SHROOM3-208ENST00000486758 AIDAQ96BJ3 306 aa14.23□□□□□ -0.13
SHROOM3-208ENST00000486758 ACSBG1Q96GR2 724 aa14.23□□□□□ -0.13
SHROOM3-208ENST00000486758 BABAM1Q9NWV8 329 aa14.23□□□□□ -0.13
SHROOM3-208ENST00000486758 CWC15Q9P013 229 aaKnown RBP14.23□□□□□ -0.13
SHROOM3-208ENST00000486758 TAF5LO75529 589 aa14.23□□□□□ -0.13
SHROOM3-208ENST00000486758 CLCN6P51797 869 aa14.23□□□□□ -0.13
SHROOM3-208ENST00000486758 SLC9C2Q5TAH2 1124 aa14.23□□□□□ -0.13
SHROOM3-208ENST00000486758 CCDC12Q8WUD4 166 aaPredicted RBP14.23□□□□□ -0.13
SHROOM3-208ENST00000486758 ZKSCAN3Q9BRR0 538 aa14.23□□□□□ -0.13
SHROOM3-208ENST00000486758 HMG20BQ9P0W2 317 aa14.23□□□□□ -0.13
SHROOM3-208ENST00000486758 ERBB3P21860 1342 aa14.23□□□□□ -0.13
SHROOM3-208ENST00000486758 SSH2Q76I76 1423 aa14.22□□□□□ -0.13
SHROOM3-208ENST00000486758 ANKRD65E5RJM6 399 aa14.22□□□□□ -0.13
SHROOM3-208ENST00000486758 TDO2P48775 406 aa14.22□□□□□ -0.13
SHROOM3-208ENST00000486758 NECTIN1Q15223 517 aa14.22□□□□□ -0.13
SHROOM3-208ENST00000486758 DLC1Q96QB1 1528 aa14.22□□□□□ -0.13
SHROOM3-208ENST00000486758 A0A0G2JLW4 131 aa14.22□□□□□ -0.13
SHROOM3-208ENST00000486758 CYP27B1O15528 508 aa14.22□□□□□ -0.13
SHROOM3-208ENST00000486758 IBSPP21815 317 aaPredicted RBP14.22□□□□□ -0.13
SHROOM3-208ENST00000486758 BRD2P25440 801 aaKnown RBP14.22□□□□□ -0.13
SHROOM3-208ENST00000486758 ADORA1P30542 326 aa14.22□□□□□ -0.13
SHROOM3-208ENST00000486758 ZSCAN16Q9H4T2 348 aaPredicted RBP14.22□□□□□ -0.13
SHROOM3-208ENST00000486758 LZTFL1Q9NQ48 299 aa14.22□□□□□ -0.13
SHROOM3-208ENST00000486758 OAS2P29728 719 aaKnown RBP14.22□□□□□ -0.13
SHROOM3-208ENST00000486758 PTPN12Q05209 780 aaKnown RBP14.22□□□□□ -0.13
SHROOM3-208ENST00000486758 DPCR1Q3MIW9 517 aa14.22□□□□□ -0.13
SHROOM3-208ENST00000486758 SNAP23O00161 211 aa14.21□□□□□ -0.13
SHROOM3-208ENST00000486758 DHX32Q7L7V1 743 aaKnown RBP14.21□□□□□ -0.13
SHROOM3-208ENST00000486758 PLA2G4DQ86XP0 818 aa14.21□□□□□ -0.13
SHROOM3-208ENST00000486758 DNAJC10Q8IXB1 793 aa14.21□□□□□ -0.13
SHROOM3-208ENST00000486758 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.21□□□□□ -0.13
SHROOM3-208ENST00000486758 ARFGAP3Q9NP61 516 aa14.21□□□□□ -0.13
SHROOM3-208ENST00000486758 VPS18Q9P253 973 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms