RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 GGNBP2Q9H3C7 697 aa6.82□□□□□ -1.32
R3HDM1-217ENST00000486532 SOX17Q9H6I2 414 aaPredicted RBP6.82□□□□□ -1.32
R3HDM1-217ENST00000486532 CYP4F12Q9HCS2 524 aa6.82□□□□□ -1.32
R3HDM1-217ENST00000486532 SLAIN2Q9P270 581 aa6.82□□□□□ -1.32
R3HDM1-217ENST00000486532 SOX13Q9UN79 622 aa6.82□□□□□ -1.32
R3HDM1-217ENST00000486532 NFKBIEO00221 500 aa6.81□□□□□ -1.32
R3HDM1-217ENST00000486532 ADAM11O75078 769 aa6.81□□□□□ -1.32
R3HDM1-217ENST00000486532 BMP3P12645 472 aa6.81□□□□□ -1.32
R3HDM1-217ENST00000486532 SSFA2P28290 1259 aa6.81□□□□□ -1.32
R3HDM1-217ENST00000486532 IRAK1P51617 712 aa6.81□□□□□ -1.32
R3HDM1-217ENST00000486532 NLRP12P59046 1061 aa6.81□□□□□ -1.32
R3HDM1-217ENST00000486532 IKBKEQ14164 716 aa6.81□□□□□ -1.32
R3HDM1-217ENST00000486532 CPSF6Q16630 551 aaKnown RBP eCLIP6.81□□□□□ -1.32
R3HDM1-217ENST00000486532 HP1BP3Q5SSJ5 553 aaPredicted RBP6.81□□□□□ -1.32
R3HDM1-217ENST00000486532 NUTM2GQ5VZR2 741 aa6.81□□□□□ -1.32
R3HDM1-217ENST00000486532 BEND4Q6ZU67 534 aa6.81□□□□□ -1.32
R3HDM1-217ENST00000486532 ZDHHC13Q8IUH4 622 aa6.81□□□□□ -1.32
R3HDM1-217ENST00000486532 TRIM42Q8IWZ5 723 aa6.81□□□□□ -1.32
R3HDM1-217ENST00000486532 ZFYVE1Q9HBF4 777 aa6.81□□□□□ -1.32
R3HDM1-217ENST00000486532 DDX3YO15523 660 aaKnown RBP6.8□□□□□ -1.32
R3HDM1-217ENST00000486532 TGFB1P01137 390 aa6.8□□□□□ -1.32
R3HDM1-217ENST00000486532 NEFLP07196 543 aa6.8□□□□□ -1.32
R3HDM1-217ENST00000486532 NXPE3Q969Y0 559 aa6.8□□□□□ -1.32
R3HDM1-217ENST00000486532 YIPF2Q9BWQ6 316 aa6.8□□□□□ -1.32
R3HDM1-217ENST00000486532 POLIQ9UNA4 740 aa6.8□□□□□ -1.32
R3HDM1-217ENST00000486532 AMOTL2Q9Y2J4 779 aa6.8□□□□□ -1.32
R3HDM1-217ENST00000486532 COL17A1Q9UMD9 1497 aaPredicted RBP6.79□□□□□ -1.32
R3HDM1-217ENST00000486532 HMX2A2RU54 273 aa6.79□□□□□ -1.32
R3HDM1-217ENST00000486532 TNFRSF21O75509 655 aa6.79□□□□□ -1.32
R3HDM1-217ENST00000486532 FKBP4Q02790 459 aaKnown RBP eCLIP6.79□□□□□ -1.32
R3HDM1-217ENST00000486532 CHRDQ9H2X0 955 aa6.79□□□□□ -1.32
R3HDM1-217ENST00000486532 GTF3C3Q9Y5Q9 886 aa6.79□□□□□ -1.32
R3HDM1-217ENST00000486532 TMEM88BA6NKF7 163 aa6.78□□□□□ -1.32
R3HDM1-217ENST00000486532 TXKP42681 527 aa6.78□□□□□ -1.32
R3HDM1-217ENST00000486532 PREPP48147 710 aa6.78□□□□□ -1.32
R3HDM1-217ENST00000486532 ADAMTSL4Q6UY14 1074 aa6.78□□□□□ -1.32
R3HDM1-217ENST00000486532 SMG8Q8ND04 991 aaKnown RBP6.78□□□□□ -1.32
R3HDM1-217ENST00000486532 ZKSCAN3Q9BRR0 538 aa6.78□□□□□ -1.32
R3HDM1-217ENST00000486532 KRTAP4-7Q9BYR0 210 aa6.78□□□□□ -1.32
R3HDM1-217ENST00000486532 BHLHE41Q9C0J9 482 aaPredicted RBP6.78□□□□□ -1.32
R3HDM1-217ENST00000486532 SUGCTQ9HAC7 445 aa6.78□□□□□ -1.32
R3HDM1-217ENST00000486532 ATG3Q9NT62 314 aa6.78□□□□□ -1.32
R3HDM1-217ENST00000486532 SOX1O00570 391 aaPredicted RBP6.77□□□□□ -1.33
R3HDM1-217ENST00000486532 EREGO14944 169 aa6.77□□□□□ -1.33
R3HDM1-217ENST00000486532 YBX3P16989 372 aaKnown RBP eCLIP6.77□□□□□ -1.33
R3HDM1-217ENST00000486532 RXRBP28702 533 aa6.77□□□□□ -1.33
R3HDM1-217ENST00000486532 GP2P55259 537 aaKnown RBP6.77□□□□□ -1.33
R3HDM1-217ENST00000486532 EXOSC6Q5RKV6 272 aaKnown RBP6.77□□□□□ -1.33
R3HDM1-217ENST00000486532 CCDC82Q8N4S0 544 aa6.77□□□□□ -1.33
R3HDM1-217ENST00000486532 C12orf50Q8NA57 414 aaPredicted RBP6.77□□□□□ -1.33
R3HDM1-217ENST00000486532 DDX54Q8TDD1 881 aaKnown RBP6.77□□□□□ -1.33
R3HDM1-217ENST00000486532 A6NHS1 94 aa6.76□□□□□ -1.33
R3HDM1-217ENST00000486532 ARID3CA6NKF2 412 aa6.76□□□□□ -1.33
R3HDM1-217ENST00000486532 EIF5BO60841 1220 aaKnown RBP6.76□□□□□ -1.33
R3HDM1-217ENST00000486532 WNT11O96014 354 aa6.76□□□□□ -1.33
R3HDM1-217ENST00000486532 ACPPP15309 386 aa6.76□□□□□ -1.33
R3HDM1-217ENST00000486532 MAP4P27816 1152 aaKnown RBP6.76□□□□□ -1.33
R3HDM1-217ENST00000486532 DTX1Q86Y01 620 aa6.76□□□□□ -1.33
R3HDM1-217ENST00000486532 SHKBP1Q8TBC3 707 aa6.76□□□□□ -1.33
R3HDM1-217ENST00000486532 ASAP3Q8TDY4 903 aa6.76□□□□□ -1.33
R3HDM1-217ENST00000486532 METTL22Q9BUU2 404 aaPredicted RBP6.76□□□□□ -1.33
R3HDM1-217ENST00000486532 USP26Q9BXU7 913 aa6.76□□□□□ -1.33
R3HDM1-217ENST00000486532 TMPRSS13Q9BYE2 586 aa6.76□□□□□ -1.33
R3HDM1-217ENST00000486532 SPINK2P20155 84 aa6.75□□□□□ -1.33
R3HDM1-217ENST00000486532 USP11P51784 963 aa6.75□□□□□ -1.33
R3HDM1-217ENST00000486532 LCE1DQ5T752 114 aa6.75□□□□□ -1.33
R3HDM1-217ENST00000486532 PAOXQ6QHF9 649 aa6.75□□□□□ -1.33
R3HDM1-217ENST00000486532 VN1R5Q7Z5H4 357 aa6.75□□□□□ -1.33
R3HDM1-217ENST00000486532 PODXL2Q9NZ53 605 aa6.75□□□□□ -1.33
R3HDM1-217ENST00000486532 PIM2Q9P1W9 311 aa6.75□□□□□ -1.33
R3HDM1-217ENST00000486532 EGFL7Q9UHF1 273 aa6.75□□□□□ -1.33
R3HDM1-217ENST00000486532 PRR19A6NJB7 356 aa6.74□□□□□ -1.33
R3HDM1-217ENST00000486532 WDR64B1ANS9 1081 aa6.74□□□□□ -1.33
R3HDM1-217ENST00000486532 TRPA1O75762 1119 aa6.74□□□□□ -1.33
R3HDM1-217ENST00000486532 ABL1P00519 1130 aa6.74□□□□□ -1.33
R3HDM1-217ENST00000486532 ESRRAP11474 423 aaPredicted RBP6.74□□□□□ -1.33
R3HDM1-217ENST00000486532 HNRNPUQ00839 825 aaKnown RBP eCLIP6.74□□□□□ -1.33
R3HDM1-217ENST00000486532 GJD3Q8N144 294 aa6.74□□□□□ -1.33
R3HDM1-217ENST00000486532 OSBPL1AQ9BXW6 950 aa6.74□□□□□ -1.33
R3HDM1-217ENST00000486532 ZFYVE28Q9HCC9 887 aa6.74□□□□□ -1.33
R3HDM1-217ENST00000486532 USTQ9Y2C2 406 aa6.74□□□□□ -1.33
R3HDM1-217ENST00000486532 LEMD3Q9Y2U8 911 aa6.74□□□□□ -1.33
R3HDM1-217ENST00000486532 LOC100289279A0A1B0GTE1 492 aa6.73□□□□□ -1.33
R3HDM1-217ENST00000486532 FZD6O60353 706 aa6.73□□□□□ -1.33
R3HDM1-217ENST00000486532 CYP11A1P05108 521 aa6.73□□□□□ -1.33
R3HDM1-217ENST00000486532 GSTM4Q03013 218 aa6.73□□□□□ -1.33
R3HDM1-217ENST00000486532 MTMR3Q13615 1198 aa6.73□□□□□ -1.33
R3HDM1-217ENST00000486532 FMNL2Q96PY5 1086 aa6.73□□□□□ -1.33
R3HDM1-217ENST00000486532 HHIPQ96QV1 700 aa6.73□□□□□ -1.33
R3HDM1-217ENST00000486532 FOXD3Q9UJU5 478 aaPredicted RBP6.73□□□□□ -1.33
R3HDM1-217ENST00000486532 FAM95CA0A1B0GW59 222 aa6.72□□□□□ -1.33
R3HDM1-217ENST00000486532 MED26O95402 600 aa6.72□□□□□ -1.33
R3HDM1-217ENST00000486532 TIAF1O95411 115 aa6.72□□□□□ -1.33
R3HDM1-217ENST00000486532 PDE3BQ13370 1112 aa6.72□□□□□ -1.33
R3HDM1-217ENST00000486532 MFSD14AQ96MC6 490 aa6.72□□□□□ -1.33
R3HDM1-217ENST00000486532 CLEC4MQ9H2X3 399 aaPredicted RBP6.72□□□□□ -1.33
R3HDM1-217ENST00000486532 BRPF3Q9ULD4 1205 aa6.72□□□□□ -1.33
R3HDM1-217ENST00000486532 ANGEL1Q9UNK9 670 aaKnown RBP6.72□□□□□ -1.33
R3HDM1-217ENST00000486532 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.72□□□□□ -1.33
R3HDM1-217ENST00000486532 PDE4CQ08493 712 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms