RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 ADAM11O75078 769 aa9.69□□□□□ -0.86
LTN1-206ENST00000486427 WISP1O95388 367 aa9.69□□□□□ -0.86
LTN1-206ENST00000486427 CD68P34810 354 aaPredicted RBP9.69□□□□□ -0.86
LTN1-206ENST00000486427 MAPK8P45983 427 aa9.69□□□□□ -0.86
LTN1-206ENST00000486427 PIP4K2BP78356 416 aa9.69□□□□□ -0.86
LTN1-206ENST00000486427 NRG1Q02297 640 aaPredicted RBP9.69□□□□□ -0.86
LTN1-206ENST00000486427 SLC7A3Q8WY07 619 aa9.69□□□□□ -0.86
LTN1-206ENST00000486427 GZF1Q9H116 711 aaPredicted RBP9.69□□□□□ -0.86
LTN1-206ENST00000486427 SEC31BQ9NQW1 1179 aa9.69□□□□□ -0.86
LTN1-206ENST00000486427 SOX1O00570 391 aaPredicted RBP9.68□□□□□ -0.86
LTN1-206ENST00000486427 GADD45BO75293 160 aaPredicted RBP9.68□□□□□ -0.86
LTN1-206ENST00000486427 IKBKEQ14164 716 aa9.68□□□□□ -0.86
LTN1-206ENST00000486427 GRM2Q14416 872 aa9.68□□□□□ -0.86
LTN1-206ENST00000486427 KLHL23Q8NBE8 558 aa9.68□□□□□ -0.86
LTN1-206ENST00000486427 GLIS3Q8NEA6 775 aa9.68□□□□□ -0.86
LTN1-206ENST00000486427 FOXD4L4Q8WXT5 416 aaPredicted RBP9.68□□□□□ -0.86
LTN1-206ENST00000486427 ABCB6Q9NP58 842 aa9.68□□□□□ -0.86
LTN1-206ENST00000486427 WWC3Q9ULE0 1092 aa9.68□□□□□ -0.86
LTN1-206ENST00000486427 ALX3O95076 343 aa9.67□□□□□ -0.86
LTN1-206ENST00000486427 P4HBP07237 508 aaKnown RBP9.67□□□□□ -0.86
LTN1-206ENST00000486427 ESRRAP11474 423 aaPredicted RBP9.67□□□□□ -0.86
LTN1-206ENST00000486427 NOS3P29474 1203 aa9.67□□□□□ -0.86
LTN1-206ENST00000486427 TXNRD3Q86VQ6 643 aa9.67□□□□□ -0.86
LTN1-206ENST00000486427 HOMEZQ8IX15 550 aa9.67□□□□□ -0.86
LTN1-206ENST00000486427 WFDC12Q8WWY7 111 aa9.67□□□□□ -0.86
LTN1-206ENST00000486427 WNT8BQ93098 351 aa9.67□□□□□ -0.86
LTN1-206ENST00000486427 MRPL18Q9H0U6 180 aaKnown RBP9.67□□□□□ -0.86
LTN1-206ENST00000486427 F8W735 103 aaPredicted RBP9.66□□□□□ -0.86
LTN1-206ENST00000486427 IREB2P48200 963 aaKnown RBP9.66□□□□□ -0.86
LTN1-206ENST00000486427 DOC2BQ14184 412 aa9.66□□□□□ -0.86
LTN1-206ENST00000486427 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.66□□□□□ -0.86
LTN1-206ENST00000486427 PRPF40BQ6NWY9 871 aaKnown RBP9.66□□□□□ -0.86
LTN1-206ENST00000486427 DCAF11Q8TEB1 546 aa9.66□□□□□ -0.86
LTN1-206ENST00000486427 UBASH3BQ8TF42 649 aa9.66□□□□□ -0.86
LTN1-206ENST00000486427 OSGEPQ9NPF4 335 aa9.66□□□□□ -0.86
LTN1-206ENST00000486427 ZNF423Q2M1K9 1284 aa9.65□□□□□ -0.86
LTN1-206ENST00000486427 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.65□□□□□ -0.86
LTN1-206ENST00000486427 AGGF1Q8N302 714 aaeCLIP9.65□□□□□ -0.86
LTN1-206ENST00000486427 TPSG1Q9NRR2 321 aa9.65□□□□□ -0.86
LTN1-206ENST00000486427 ANKRD33BA6NCL7 494 aa9.64□□□□□ -0.87
LTN1-206ENST00000486427 ITPKAP23677 461 aa9.64□□□□□ -0.87
LTN1-206ENST00000486427 NLRP12P59046 1061 aa9.64□□□□□ -0.87
LTN1-206ENST00000486427 PCDH1Q08174 1060 aa9.64□□□□□ -0.87
LTN1-206ENST00000486427 C19orf57Q0VDD7 668 aa9.64□□□□□ -0.87
LTN1-206ENST00000486427 DNAJC14Q6Y2X3 702 aaPredicted RBP9.64□□□□□ -0.87
LTN1-206ENST00000486427 TMEM130Q8N3G9 435 aa9.64□□□□□ -0.87
LTN1-206ENST00000486427 CLEC4MQ9H2X3 399 aaPredicted RBP9.64□□□□□ -0.87
LTN1-206ENST00000486427 ZNF576Q9H609 170 aa9.64□□□□□ -0.87
LTN1-206ENST00000486427 AKTIPQ9H8T0 292 aa9.64□□□□□ -0.87
LTN1-206ENST00000486427 NLRP2Q9NX02 1062 aa9.64□□□□□ -0.87
LTN1-206ENST00000486427 TMEM238LA0A1B0GVL6 79 aa9.63□□□□□ -0.87
LTN1-206ENST00000486427 ACAD11Q709F0 780 aa9.63□□□□□ -0.87
LTN1-206ENST00000486427 MEGF10Q96KG7 1140 aa9.63□□□□□ -0.87
LTN1-206ENST00000486427 SSBP4Q9BWG4 385 aaPredicted RBP9.63□□□□□ -0.87
LTN1-206ENST00000486427 BCO2Q9BYV7 579 aa9.63□□□□□ -0.87
LTN1-206ENST00000486427 FURINP09958 794 aa9.62□□□□□ -0.87
LTN1-206ENST00000486427 ARL4DP49703 201 aa9.62□□□□□ -0.87
LTN1-206ENST00000486427 KIAA1211Q6ZU35 1233 aa9.62□□□□□ -0.87
LTN1-206ENST00000486427 SOX17Q9H6I2 414 aaPredicted RBP9.62□□□□□ -0.87
LTN1-206ENST00000486427 TRAK1Q9UPV9 953 aa9.62□□□□□ -0.87
LTN1-206ENST00000486427 DUOXA2Q1HG44 320 aa9.61□□□□□ -0.87
LTN1-206ENST00000486427 NXPE4Q6UWF7 544 aa9.61□□□□□ -0.87
LTN1-206ENST00000486427 LDHBP07195 334 aaKnown RBP9.6□□□□□ -0.87
LTN1-206ENST00000486427 FCGRTP55899 365 aa9.6□□□□□ -0.87
LTN1-206ENST00000486427 GSTM4Q03013 218 aa9.6□□□□□ -0.87
LTN1-206ENST00000486427 ALG1LQ6GMV1 187 aa9.6□□□□□ -0.87
LTN1-206ENST00000486427 Q6ZS46 218 aa9.6□□□□□ -0.87
LTN1-206ENST00000486427 NPAS4Q8IUM7 802 aa9.6□□□□□ -0.87
LTN1-206ENST00000486427 FBF1Q8TES7 1133 aa9.6□□□□□ -0.87
LTN1-206ENST00000486427 B3GALT4O96024 378 aa9.59□□□□□ -0.87
LTN1-206ENST00000486427 PTPN12Q05209 780 aaKnown RBP9.59□□□□□ -0.87
LTN1-206ENST00000486427 FAAP100Q0VG06 881 aa9.59□□□□□ -0.87
LTN1-206ENST00000486427 OSBPL7Q9BZF2 842 aa9.59□□□□□ -0.87
LTN1-206ENST00000486427 NRSN2Q9GZP1 204 aa9.59□□□□□ -0.87
LTN1-206ENST00000486427 DLGAP3O95886 979 aa9.58□□□□□ -0.88
LTN1-206ENST00000486427 ATP2B2Q01814 1243 aa9.58□□□□□ -0.88
LTN1-206ENST00000486427 RSPO4Q2I0M5 234 aaPredicted RBP9.58□□□□□ -0.88
LTN1-206ENST00000486427 CCDC27Q2M243 656 aa9.58□□□□□ -0.88
LTN1-206ENST00000486427 NKAPLQ5M9Q1 402 aa9.58□□□□□ -0.88
LTN1-206ENST00000486427 DZIP1LQ8IYY4 767 aaKnown RBP9.58□□□□□ -0.88
LTN1-206ENST00000486427 USP26Q9BXU7 913 aa9.58□□□□□ -0.88
LTN1-206ENST00000486427 RNF19AQ9NV58 838 aa9.58□□□□□ -0.88
LTN1-206ENST00000486427 LOC100289279A0A1B0GTE1 492 aa9.57□□□□□ -0.88
LTN1-206ENST00000486427 DTHD1Q6ZMT9 781 aa9.57□□□□□ -0.88
LTN1-206ENST00000486427 TP53INP1Q96A56 240 aa9.57□□□□□ -0.88
LTN1-206ENST00000486427 UBL7Q96S82 380 aaPredicted RBP9.57□□□□□ -0.88
LTN1-206ENST00000486427 GLB1P16278 677 aa9.56□□□□□ -0.88
LTN1-206ENST00000486427 ZNF157P51786 506 aaPredicted RBP9.56□□□□□ -0.88
LTN1-206ENST00000486427 COL19A1Q14993 1142 aa9.56□□□□□ -0.88
LTN1-206ENST00000486427 C3orf58Q8NDZ4 430 aa9.56□□□□□ -0.88
LTN1-206ENST00000486427 TRIM56Q9BRZ2 755 aaKnown RBP9.56□□□□□ -0.88
LTN1-206ENST00000486427 CTSBP07858 339 aa9.55□□□□□ -0.88
LTN1-206ENST00000486427 EAPPQ56P03 285 aaPredicted RBP9.55□□□□□ -0.88
LTN1-206ENST00000486427 RPS26P11Q5JNZ5 115 aaPredicted RBP9.55□□□□□ -0.88
LTN1-206ENST00000486427 RUSC1Q9BVN2 902 aa9.55□□□□□ -0.88
LTN1-206ENST00000486427 PPP4R2Q9NY27 417 aa9.55□□□□□ -0.88
LTN1-206ENST00000486427 PRPF40AO75400 957 aaKnown RBP9.54□□□□□ -0.88
LTN1-206ENST00000486427 ECEL1O95672 775 aa9.54□□□□□ -0.88
LTN1-206ENST00000486427 AKAP2Q9Y2D5 859 aa9.54□□□□□ -0.88
LTN1-206ENST00000486427 ZBTB7CA1YPR0 619 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms