RNA–Protein interactions for RNA: ENST00000486361.5

LIMK1-206, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 569 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-206ENST00000486361 TRAF5O00463 557 aa24.55■■□□□ 1.52
LIMK1-206ENST00000486361 TIMM10P62072 90 aa24.55■■□□□ 1.52
LIMK1-206ENST00000486361 CHAF1AQ13111 956 aaPredicted RBP24.55■■□□□ 1.52
LIMK1-206ENST00000486361 PDE3AQ14432 1141 aa24.55■■□□□ 1.52
LIMK1-206ENST00000486361 CEP85Q6P2H3 762 aa24.55■■□□□ 1.52
LIMK1-206ENST00000486361 MYOZ2Q9NPC6 264 aa24.55■■□□□ 1.52
LIMK1-206ENST00000486361 PGAP2Q9UHJ9 254 aa24.55■■□□□ 1.52
LIMK1-206ENST00000486361 MYO3BQ8WXR4 1341 aa24.55■■□□□ 1.52
LIMK1-206ENST00000486361 ZNF646O15015 1829 aaPredicted RBP24.54■■□□□ 1.52
LIMK1-206ENST00000486361 ZNF609O15014 1411 aa24.54■■□□□ 1.52
LIMK1-206ENST00000486361 FRAT2O75474 233 aaPredicted RBP24.54■■□□□ 1.52
LIMK1-206ENST00000486361 ADORA1P30542 326 aa24.54■■□□□ 1.52
LIMK1-206ENST00000486361 DLK2Q6UY11 383 aa24.54■■□□□ 1.52
LIMK1-206ENST00000486361 GLIS2Q9BZE0 524 aaPredicted RBP24.54■■□□□ 1.52
LIMK1-206ENST00000486361 ZBTB40Q9NUA8 1239 aa24.54■■□□□ 1.52
LIMK1-206ENST00000486361 SURF6O75683 361 aaKnown RBP24.53■■□□□ 1.52
LIMK1-206ENST00000486361 SCARF1Q14162 830 aa24.53■■□□□ 1.52
LIMK1-206ENST00000486361 OGFOD1Q8N543 542 aa24.53■■□□□ 1.52
LIMK1-206ENST00000486361 ZC3H15Q8WU90 426 aaKnown RBP24.53■■□□□ 1.52
LIMK1-206ENST00000486361 FAM205AQ6ZU69 1335 aa24.53■■□□□ 1.52
LIMK1-206ENST00000486361 USP48Q86UV5 1035 aa24.52■■□□□ 1.52
LIMK1-206ENST00000486361 OS9Q13438 667 aaPredicted RBP24.51■■□□□ 1.51
LIMK1-206ENST00000486361 NBPF9Q3BBW0 867 aa24.51■■□□□ 1.51
LIMK1-206ENST00000486361 MFSD14BQ5SR56 506 aa24.51■■□□□ 1.51
LIMK1-206ENST00000486361 A0A1B0GUL7 405 aa24.5■■□□□ 1.51
LIMK1-206ENST00000486361 GRIK5Q16478 980 aa24.5■■□□□ 1.51
LIMK1-206ENST00000486361 NEUROD6Q96NK8 337 aa24.5■■□□□ 1.51
LIMK1-206ENST00000486361 HDAC9Q9UKV0 1011 aa24.5■■□□□ 1.51
LIMK1-206ENST00000486361 SCAF8Q9UPN6 1271 aaKnown RBP24.5■■□□□ 1.51
LIMK1-206ENST00000486361 PCDHAC2Q9Y5I4 1007 aa24.5■■□□□ 1.51
LIMK1-206ENST00000486361 PHKA1P46020 1223 aa24.49■■□□□ 1.51
LIMK1-206ENST00000486361 RRP1P56182 461 aaKnown RBP24.49■■□□□ 1.51
LIMK1-206ENST00000486361 FKBP1AP62942 108 aaKnown RBP24.49■■□□□ 1.51
LIMK1-206ENST00000486361 GGA3Q9NZ52 723 aa24.49■■□□□ 1.51
LIMK1-206ENST00000486361 AKAP2Q9Y2D5 859 aa24.49■■□□□ 1.51
LIMK1-206ENST00000486361 ANGEL2Q5VTE6 544 aaKnown RBP24.48■■□□□ 1.51
LIMK1-206ENST00000486361 CDC37L1Q7L3B6 337 aa24.48■■□□□ 1.51
LIMK1-206ENST00000486361 DCPSQ96C86 337 aaKnown RBP24.48■■□□□ 1.51
LIMK1-206ENST00000486361 XAGE2Q96GT9 111 aa24.48■■□□□ 1.51
LIMK1-206ENST00000486361 ADM5C9JUS6 153 aa24.47■■□□□ 1.51
LIMK1-206ENST00000486361 WNT10BO00744 389 aa24.47■■□□□ 1.51
LIMK1-206ENST00000486361 SIRT2Q8IXJ6 389 aa24.47■■□□□ 1.51
LIMK1-206ENST00000486361 NOP58Q9Y2X3 529 aaKnown RBP24.47■■□□□ 1.51
LIMK1-206ENST00000486361 CCDC102BQ68D86 513 aa24.46■■□□□ 1.51
LIMK1-206ENST00000486361 KRT26Q7Z3Y9 468 aa24.46■■□□□ 1.51
LIMK1-206ENST00000486361 DNAJC5GQ8N7S2 189 aa24.46■■□□□ 1.51
LIMK1-206ENST00000486361 CHMP4BQ9H444 224 aaKnown RBP24.46■■□□□ 1.51
LIMK1-206ENST00000486361 TTF2Q9UNY4 1162 aaKnown RBP24.46■■□□□ 1.51
LIMK1-206ENST00000486361 EXOC6BQ9Y2D4 811 aa24.46■■□□□ 1.51
LIMK1-206ENST00000486361 TMEM88BA6NKF7 163 aa24.45■■□□□ 1.5
LIMK1-206ENST00000486361 CFAP100Q494V2 611 aa24.45■■□□□ 1.5
LIMK1-206ENST00000486361 CST9Q5W186 159 aa24.45■■□□□ 1.5
LIMK1-206ENST00000486361 RPAP2Q8IXW5 612 aaPredicted RBP24.45■■□□□ 1.5
LIMK1-206ENST00000486361 ZNF408Q9H9D4 720 aa24.45■■□□□ 1.5
LIMK1-206ENST00000486361 CREBZFQ9NS37 354 aa24.45■■□□□ 1.5
LIMK1-206ENST00000486361 GNL3LQ9NVN8 582 aaKnown RBP24.45■■□□□ 1.5
LIMK1-206ENST00000486361 RBM5P52756 815 aaKnown RBP eCLIP24.44■■□□□ 1.5
LIMK1-206ENST00000486361 DLGAP5Q15398 846 aa24.44■■□□□ 1.5
LIMK1-206ENST00000486361 ZBED3Q96IU2 234 aaPredicted RBP24.44■■□□□ 1.5
LIMK1-206ENST00000486361 POLR2AP24928 1970 aaKnown RBP24.43■■□□□ 1.5
LIMK1-206ENST00000486361 COL1A1P02452 1464 aaPredicted RBP24.43■■□□□ 1.5
LIMK1-206ENST00000486361 AOX1Q06278 1338 aa24.42■■□□□ 1.5
LIMK1-206ENST00000486361 CELF2O95319 508 aaKnown RBP24.42■■□□□ 1.5
LIMK1-206ENST00000486361 MMP14P50281 582 aa24.42■■□□□ 1.5
LIMK1-206ENST00000486361 TNNI3KQ59H18 835 aa24.42■■□□□ 1.5
LIMK1-206ENST00000486361 GORABQ5T7V8 394 aa24.42■■□□□ 1.5
LIMK1-206ENST00000486361 SULF1Q8IWU6 871 aa24.42■■□□□ 1.5
LIMK1-206ENST00000486361 TBC1D22AQ8WUA7 517 aa24.42■■□□□ 1.5
LIMK1-206ENST00000486361 PRMT6Q96LA8 375 aaPredicted RBP24.42■■□□□ 1.5
LIMK1-206ENST00000486361 FPGT-TNNI3KV9GXZ4 949 aa24.42■■□□□ 1.5
LIMK1-206ENST00000486361 APBB1O00213 710 aa24.41■■□□□ 1.5
LIMK1-206ENST00000486361 MKRN1Q9UHC7 482 aaKnown RBP24.41■■□□□ 1.5
LIMK1-206ENST00000486361 PRAMEF18Q5VWM3 479 aa24.4■■□□□ 1.5
LIMK1-206ENST00000486361 MTMR14Q8NCE2 650 aa24.4■■□□□ 1.5
LIMK1-206ENST00000486361 WDR66Q8TBY9 1149 aa24.4■■□□□ 1.5
LIMK1-206ENST00000486361 DBNDD2Q9BQY9 259 aa24.4■■□□□ 1.5
LIMK1-206ENST00000486361 DENND2AQ9ULE3 1009 aa24.4■■□□□ 1.5
LIMK1-206ENST00000486361 CLRN2A0PK11 232 aa24.39■■□□□ 1.49
LIMK1-206ENST00000486361 HMMRO75330 724 aa24.39■■□□□ 1.49
LIMK1-206ENST00000486361 RASGRF1Q13972 1273 aa24.39■■□□□ 1.49
LIMK1-206ENST00000486361 KLRG1Q96E93 195 aa24.39■■□□□ 1.49
LIMK1-206ENST00000486361 CRBNQ96SW2 442 aa24.39■■□□□ 1.49
LIMK1-206ENST00000486361 CCDC8Q9H0W5 538 aaPredicted RBP24.39■■□□□ 1.49
LIMK1-206ENST00000486361 BCL11AQ9H165 835 aa24.39■■□□□ 1.49
LIMK1-206ENST00000486361 GPR108Q9NPR9 543 aa24.39■■□□□ 1.49
LIMK1-206ENST00000486361 ABT1Q9ULW3 272 aaKnown RBP24.39■■□□□ 1.49
LIMK1-206ENST00000486361 SPDYE2BA6NHP3 402 aa24.38■■□□□ 1.49
LIMK1-206ENST00000486361 SPDYE6P0CI01 402 aa24.38■■□□□ 1.49
LIMK1-206ENST00000486361 CRKP46108 304 aa24.38■■□□□ 1.49
LIMK1-206ENST00000486361 EAF2Q96CJ1 260 aaPredicted RBP24.38■■□□□ 1.49
LIMK1-206ENST00000486361 SEMA3EO15041 775 aa24.37■■□□□ 1.49
LIMK1-206ENST00000486361 CDCA5Q96FF9 252 aa24.37■■□□□ 1.49
LIMK1-206ENST00000486361 IL1RAPL2Q9NP60 686 aa24.37■■□□□ 1.49
LIMK1-206ENST00000486361 TLR7Q9NYK1 1049 aaKnown RBP24.37■■□□□ 1.49
LIMK1-206ENST00000486361 SERPINA10Q9UK55 444 aa24.37■■□□□ 1.49
LIMK1-206ENST00000486361 PITPNM2Q9BZ72 1349 aa24.36■■□□□ 1.49
LIMK1-206ENST00000486361 ARAP2Q8WZ64 1704 aa24.36■■□□□ 1.49
LIMK1-206ENST00000486361 PRDX5P30044 214 aa24.36■■□□□ 1.49
LIMK1-206ENST00000486361 PI16Q6UXB8 463 aa24.36■■□□□ 1.49
LIMK1-206ENST00000486361 ERC1Q8IUD2 1116 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms