RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 K7ELQ4 463 aaPredicted RBP9.25□□□□□ -0.93
TMEM39A-209ENST00000486235 EXOC5O00471 708 aa9.25□□□□□ -0.93
TMEM39A-209ENST00000486235 FURINP09958 794 aa9.25□□□□□ -0.93
TMEM39A-209ENST00000486235 IRF5Q13568 498 aa9.25□□□□□ -0.93
TMEM39A-209ENST00000486235 LINC00114Q6XXX2 140 aa9.25□□□□□ -0.93
TMEM39A-209ENST00000486235 TBC1D9Q6ZT07 1266 aa9.25□□□□□ -0.93
TMEM39A-209ENST00000486235 ARHGEF25Q86VW2 580 aa9.25□□□□□ -0.93
TMEM39A-209ENST00000486235 ACSBG1Q96GR2 724 aa9.25□□□□□ -0.93
TMEM39A-209ENST00000486235 CARD10Q9BWT7 1032 aa9.25□□□□□ -0.93
TMEM39A-209ENST00000486235 MTFR1LQ9H019 292 aa9.25□□□□□ -0.93
TMEM39A-209ENST00000486235 NDFIP2Q9NV92 336 aa9.25□□□□□ -0.93
TMEM39A-209ENST00000486235 PIK3C2AO00443 1686 aa9.25□□□□□ -0.93
TMEM39A-209ENST00000486235 COL18A1P39060 1754 aa9.24□□□□□ -0.93
TMEM39A-209ENST00000486235 BCL9O00512 1426 aa9.24□□□□□ -0.93
TMEM39A-209ENST00000486235 HOXB4P17483 251 aaPredicted RBP9.24□□□□□ -0.93
TMEM39A-209ENST00000486235 VAC14Q08AM6 782 aa9.24□□□□□ -0.93
TMEM39A-209ENST00000486235 ZCCHC2Q9C0B9 1178 aaKnown RBP9.24□□□□□ -0.93
TMEM39A-209ENST00000486235 KIAA1210Q9ULL0 1709 aa9.24□□□□□ -0.93
TMEM39A-209ENST00000486235 TTC21BQ7Z4L5 1316 aa9.24□□□□□ -0.93
TMEM39A-209ENST00000486235 WNK3Q9BYP7 1800 aa9.24□□□□□ -0.93
TMEM39A-209ENST00000486235 QRICH2Q9H0J4 1663 aa9.23□□□□□ -0.93
TMEM39A-209ENST00000486235 AKAP12Q02952 1782 aa9.23□□□□□ -0.93
TMEM39A-209ENST00000486235 NEURL1BA8MQ27 555 aa9.23□□□□□ -0.93
TMEM39A-209ENST00000486235 SLCO4C1Q6ZQN7 724 aa9.23□□□□□ -0.93
TMEM39A-209ENST00000486235 KCNH5Q8NCM2 988 aa9.23□□□□□ -0.93
TMEM39A-209ENST00000486235 BTBD6Q96KE9 485 aa9.23□□□□□ -0.93
TMEM39A-209ENST00000486235 CRISPLD1Q9H336 500 aa9.23□□□□□ -0.93
TMEM39A-209ENST00000486235 SERTAD1Q9UHV2 236 aa9.23□□□□□ -0.93
TMEM39A-209ENST00000486235 CCDC7Q96M83 1385 aa9.23□□□□□ -0.93
TMEM39A-209ENST00000486235 TNS2Q63HR2 1409 aa9.22□□□□□ -0.93
TMEM39A-209ENST00000486235 SCNN1DP51172 638 aa9.22□□□□□ -0.93
TMEM39A-209ENST00000486235 GDF10P55107 478 aa9.22□□□□□ -0.93
TMEM39A-209ENST00000486235 C1QTNF8P60827 252 aa9.22□□□□□ -0.93
TMEM39A-209ENST00000486235 EVC2Q86UK5 1308 aa9.22□□□□□ -0.93
TMEM39A-209ENST00000486235 INHAP05111 366 aa9.21□□□□□ -0.94
TMEM39A-209ENST00000486235 EPXP11678 715 aa9.21□□□□□ -0.94
TMEM39A-209ENST00000486235 GPR162Q16538 588 aa9.21□□□□□ -0.94
TMEM39A-209ENST00000486235 ZNF827Q17R98 1081 aa9.21□□□□□ -0.94
TMEM39A-209ENST00000486235 PRM3Q9NNZ6 103 aa9.21□□□□□ -0.94
TMEM39A-209ENST00000486235 DNAAF2Q9NVR5 837 aaKnown RBP9.21□□□□□ -0.94
TMEM39A-209ENST00000486235 NLRP2Q9NX02 1062 aa9.21□□□□□ -0.94
TMEM39A-209ENST00000486235 PCDHGC4Q9Y5F7 938 aa9.21□□□□□ -0.94
TMEM39A-209ENST00000486235 RGPD5Q99666 1765 aa9.21□□□□□ -0.94
TMEM39A-209ENST00000486235 DCDC2BA2VCK2 349 aa9.2□□□□□ -0.94
TMEM39A-209ENST00000486235 ATXN7O15265 892 aaPredicted RBP9.2□□□□□ -0.94
TMEM39A-209ENST00000486235 ATP4AP20648 1035 aa9.2□□□□□ -0.94
TMEM39A-209ENST00000486235 ARSJQ5FYB0 599 aaPredicted RBP9.2□□□□□ -0.94
TMEM39A-209ENST00000486235 FIGNL1Q6PIW4 674 aa9.2□□□□□ -0.94
TMEM39A-209ENST00000486235 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.2□□□□□ -0.94
TMEM39A-209ENST00000486235 NIFKQ9BYG3 293 aaKnown RBP9.2□□□□□ -0.94
TMEM39A-209ENST00000486235 GDPD2Q9HCC8 539 aa9.2□□□□□ -0.94
TMEM39A-209ENST00000486235 TTC21AQ8NDW8 1320 aa9.2□□□□□ -0.94
TMEM39A-209ENST00000486235 NFAT5O94916 1531 aa9.2□□□□□ -0.94
TMEM39A-209ENST00000486235 NHSQ6T4R5 1651 aa9.2□□□□□ -0.94
TMEM39A-209ENST00000486235 CD33P20138 364 aa9.19□□□□□ -0.94
TMEM39A-209ENST00000486235 ABL2P42684 1182 aa9.19□□□□□ -0.94
TMEM39A-209ENST00000486235 HCN2Q9UL51 889 aa9.19□□□□□ -0.94
TMEM39A-209ENST00000486235 KTN1Q86UP2 1357 aaKnown RBP9.19□□□□□ -0.94
TMEM39A-209ENST00000486235 TRPM1Q7Z4N2 1603 aa9.19□□□□□ -0.94
TMEM39A-209ENST00000486235 A0A1W2PNR3 127 aa9.18□□□□□ -0.94
TMEM39A-209ENST00000486235 C1QTNF9BB2RNN3 333 aa9.18□□□□□ -0.94
TMEM39A-209ENST00000486235 GNB5O14775 395 aa9.18□□□□□ -0.94
TMEM39A-209ENST00000486235 ABCC6O95255 1503 aa9.18□□□□□ -0.94
TMEM39A-209ENST00000486235 ARAFP10398 606 aa9.18□□□□□ -0.94
TMEM39A-209ENST00000486235 IL2RBP14784 551 aa9.18□□□□□ -0.94
TMEM39A-209ENST00000486235 SMTNP53814 917 aa9.18□□□□□ -0.94
TMEM39A-209ENST00000486235 PAPPAQ13219 1627 aa9.18□□□□□ -0.94
TMEM39A-209ENST00000486235 ALYREFQ86V81 257 aaKnown RBP9.18□□□□□ -0.94
TMEM39A-209ENST00000486235 L3MBTL2Q969R5 705 aa9.18□□□□□ -0.94
TMEM39A-209ENST00000486235 MAP3K5Q99683 1374 aa9.18□□□□□ -0.94
TMEM39A-209ENST00000486235 CHD4Q14839 1912 aa9.17□□□□□ -0.94
TMEM39A-209ENST00000486235 UTRNP46939 3433 aa9.17□□□□□ -0.94
TMEM39A-209ENST00000486235 KHNYNO15037 678 aaKnown RBP9.17□□□□□ -0.94
TMEM39A-209ENST00000486235 POLD1P28340 1107 aa9.17□□□□□ -0.94
TMEM39A-209ENST00000486235 KCNQ4P56696 695 aa9.17□□□□□ -0.94
TMEM39A-209ENST00000486235 NME9Q86XW9 330 aa9.17□□□□□ -0.94
TMEM39A-209ENST00000486235 PLPP7Q8NBV4 271 aa9.17□□□□□ -0.94
TMEM39A-209ENST00000486235 ANKRD24Q8TF21 1146 aa9.17□□□□□ -0.94
TMEM39A-209ENST00000486235 KLF15Q9UIH9 416 aa9.17□□□□□ -0.94
TMEM39A-209ENST00000486235 KAT6BQ8WYB5 2073 aa9.17□□□□□ -0.94
TMEM39A-209ENST00000486235 ROCK2O75116 1388 aaKnown RBP9.16□□□□□ -0.94
TMEM39A-209ENST00000486235 MAPTP10636 758 aaKnown RBP9.16□□□□□ -0.94
TMEM39A-209ENST00000486235 CHSY3Q70JA7 882 aa9.16□□□□□ -0.94
TMEM39A-209ENST00000486235 CD163Q86VB7 1156 aa9.16□□□□□ -0.94
TMEM39A-209ENST00000486235 NLRP8Q86W28 1048 aa9.16□□□□□ -0.94
TMEM39A-209ENST00000486235 NLGN2Q8NFZ4 835 aa9.16□□□□□ -0.94
TMEM39A-209ENST00000486235 DDX54Q8TDD1 881 aaKnown RBP9.16□□□□□ -0.94
TMEM39A-209ENST00000486235 PARP3Q9Y6F1 533 aa9.16□□□□□ -0.94
TMEM39A-209ENST00000486235 USP3Q9Y6I4 520 aa9.16□□□□□ -0.94
TMEM39A-209ENST00000486235 BTAF1O14981 1849 aa9.16□□□□□ -0.94
TMEM39A-209ENST00000486235 PNPLA7Q6ZV29 1317 aa9.15□□□□□ -0.94
TMEM39A-209ENST00000486235 DGKGP49619 791 aa9.15□□□□□ -0.94
TMEM39A-209ENST00000486235 PCBP4P57723 403 aaKnown RBP9.15□□□□□ -0.94
TMEM39A-209ENST00000486235 TNP2Q05952 138 aa9.15□□□□□ -0.94
TMEM39A-209ENST00000486235 C1orf216Q8TAB5 229 aa9.15□□□□□ -0.94
TMEM39A-209ENST00000486235 TMC1Q8TDI8 760 aa9.15□□□□□ -0.94
TMEM39A-209ENST00000486235 SYTL4Q96C24 671 aaPredicted RBP9.15□□□□□ -0.94
TMEM39A-209ENST00000486235 LTV1Q96GA3 475 aaPredicted RBP9.15□□□□□ -0.94
TMEM39A-209ENST00000486235 TFCP2L1Q9NZI6 479 aa9.15□□□□□ -0.94
TMEM39A-209ENST00000486235 USP31Q70CQ4 1352 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms