RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 PTCH2Q9Y6C5 1203 aa11.02□□□□□ -0.65
XRN1-212ENST00000486211 WTIPA6NIX2 430 aaPredicted RBP11.01□□□□□ -0.65
XRN1-212ENST00000486211 USP17L8P0C7I0 530 aa11.01□□□□□ -0.65
XRN1-212ENST00000486211 TAF7Q15545 349 aaPredicted RBP11.01□□□□□ -0.65
XRN1-212ENST00000486211 SLC4A8Q2Y0W8 1093 aa11.01□□□□□ -0.65
XRN1-212ENST00000486211 SLC9C1Q4G0N8 1177 aa11.01□□□□□ -0.65
XRN1-212ENST00000486211 NLRP10Q86W26 655 aa11.01□□□□□ -0.65
XRN1-212ENST00000486211 SHISA4Q96DD7 197 aa11.01□□□□□ -0.65
XRN1-212ENST00000486211 EYA3Q99504 573 aa11.01□□□□□ -0.65
XRN1-212ENST00000486211 A0A1W2PPC1 479 aa11□□□□□ -0.65
XRN1-212ENST00000486211 NF2P35240 595 aa11□□□□□ -0.65
XRN1-212ENST00000486211 SP3Q02447 781 aa11□□□□□ -0.65
XRN1-212ENST00000486211 ARMC9Q7Z3E5 817 aa11□□□□□ -0.65
XRN1-212ENST00000486211 UBE2Q1Q7Z7E8 422 aa11□□□□□ -0.65
XRN1-212ENST00000486211 RTF1Q92541 710 aaKnown RBP11□□□□□ -0.65
XRN1-212ENST00000486211 ZBTB48P10074 688 aaPredicted RBP10.99□□□□□ -0.65
XRN1-212ENST00000486211 EIF4A1P60842 406 aaKnown RBP10.99□□□□□ -0.65
XRN1-212ENST00000486211 PRKG1Q13976 671 aa10.99□□□□□ -0.65
XRN1-212ENST00000486211 NBPF11Q86T75 865 aa10.99□□□□□ -0.65
XRN1-212ENST00000486211 DPF3Q92784 378 aa10.99□□□□□ -0.65
XRN1-212ENST00000486211 WNK4Q96J92 1243 aa10.99□□□□□ -0.65
XRN1-212ENST00000486211 ZC3H12CQ9C0D7 883 aaKnown RBP10.99□□□□□ -0.65
XRN1-212ENST00000486211 RYDENQ9NUL5 291 aaKnown RBP10.99□□□□□ -0.65
XRN1-212ENST00000486211 FZD1Q9UP38 647 aa10.99□□□□□ -0.65
XRN1-212ENST00000486211 ERBB4Q15303 1308 aa10.99□□□□□ -0.65
XRN1-212ENST00000486211 SH3TC1Q8TE82 1336 aa10.99□□□□□ -0.65
XRN1-212ENST00000486211 UNC80Q8N2C7 3258 aa10.99□□□□□ -0.65
XRN1-212ENST00000486211 ZNF646O15015 1829 aaPredicted RBP10.98□□□□□ -0.65
XRN1-212ENST00000486211 WNT10BO00744 389 aa10.98□□□□□ -0.65
XRN1-212ENST00000486211 HTATSF1O43719 755 aaKnown RBP10.98□□□□□ -0.65
XRN1-212ENST00000486211 MYCP01106 439 aaPredicted RBP10.98□□□□□ -0.65
XRN1-212ENST00000486211 PDIA6Q15084 440 aa10.98□□□□□ -0.65
XRN1-212ENST00000486211 SF3B3Q15393 1217 aaKnown RBP10.98□□□□□ -0.65
XRN1-212ENST00000486211 CLMNQ96JQ2 1002 aa10.98□□□□□ -0.65
XRN1-212ENST00000486211 PTPN18Q99952 460 aa10.98□□□□□ -0.65
XRN1-212ENST00000486211 THUMPD2Q9BTF0 503 aaKnown RBP10.98□□□□□ -0.65
XRN1-212ENST00000486211 PODXL2Q9NZ53 605 aa10.98□□□□□ -0.65
XRN1-212ENST00000486211 TRMT112Q9UI30 125 aaKnown RBP10.98□□□□□ -0.65
XRN1-212ENST00000486211 ANGEL1Q9UNK9 670 aaKnown RBP10.98□□□□□ -0.65
XRN1-212ENST00000486211 SSC5DA1L4H1 1573 aa10.98□□□□□ -0.65
XRN1-212ENST00000486211 ZBTB7BO15156 539 aaPredicted RBP10.97□□□□□ -0.65
XRN1-212ENST00000486211 GJA5P36382 358 aa10.97□□□□□ -0.65
XRN1-212ENST00000486211 MAP3K11Q16584 847 aa10.97□□□□□ -0.65
XRN1-212ENST00000486211 PROSER3Q2NL68 480 aa10.97□□□□□ -0.65
XRN1-212ENST00000486211 SH3TC2Q8TF17 1288 aa10.97□□□□□ -0.65
XRN1-212ENST00000486211 SLC10A4Q96EP9 437 aa10.97□□□□□ -0.65
XRN1-212ENST00000486211 STXBP5LQ9Y2K9 1186 aa10.97□□□□□ -0.65
XRN1-212ENST00000486211 TESPA1A2RU30 521 aaPredicted RBP10.96□□□□□ -0.65
XRN1-212ENST00000486211 PER1O15534 1290 aaPredicted RBP10.96□□□□□ -0.65
XRN1-212ENST00000486211 HSPA5P11021 654 aaKnown RBP10.96□□□□□ -0.65
XRN1-212ENST00000486211 POTEEQ6S8J3 1075 aa10.96□□□□□ -0.65
XRN1-212ENST00000486211 PTCD2Q8WV60 388 aaKnown RBP10.96□□□□□ -0.65
XRN1-212ENST00000486211 ZSWIM8A7E2V4 1837 aa10.95□□□□□ -0.66
XRN1-212ENST00000486211 USP17L3A6NCW0 530 aa10.95□□□□□ -0.66
XRN1-212ENST00000486211 USP17L4A6NCW7 530 aa10.95□□□□□ -0.66
XRN1-212ENST00000486211 UFL1O94874 794 aa10.95□□□□□ -0.66
XRN1-212ENST00000486211 FOXK1P85037 733 aa10.95□□□□□ -0.66
XRN1-212ENST00000486211 HSP90AB3PQ58FF7 597 aa10.95□□□□□ -0.66
XRN1-212ENST00000486211 CC2D1BQ5T0F9 858 aaKnown RBP10.95□□□□□ -0.66
XRN1-212ENST00000486211 USP17L1Q7RTZ2 530 aa10.95□□□□□ -0.66
XRN1-212ENST00000486211 PLPP6Q8IY26 295 aa10.95□□□□□ -0.66
XRN1-212ENST00000486211 GPHNQ9NQX3 736 aaPredicted RBP10.95□□□□□ -0.66
XRN1-212ENST00000486211 SASH1O94885 1247 aa10.94□□□□□ -0.66
XRN1-212ENST00000486211 ANXA1P04083 346 aa10.94□□□□□ -0.66
XRN1-212ENST00000486211 RPS8P62241 208 aaKnown RBP10.94□□□□□ -0.66
XRN1-212ENST00000486211 MTFR1Q15390 333 aa10.94□□□□□ -0.66
XRN1-212ENST00000486211 OTUD7BQ6GQQ9 843 aa10.94□□□□□ -0.66
XRN1-212ENST00000486211 Q7L0L9 218 aa10.94□□□□□ -0.66
XRN1-212ENST00000486211 DEFB123Q8N688 67 aa10.94□□□□□ -0.66
XRN1-212ENST00000486211 ZNF428Q96B54 188 aa10.94□□□□□ -0.66
XRN1-212ENST00000486211 ZBED3Q96IU2 234 aaPredicted RBP10.94□□□□□ -0.66
XRN1-212ENST00000486211 MXD3Q9BW11 206 aa10.94□□□□□ -0.66
XRN1-212ENST00000486211 GGA1Q9UJY5 639 aa10.94□□□□□ -0.66
XRN1-212ENST00000486211 COL1A1P02452 1464 aaPredicted RBP10.93□□□□□ -0.66
XRN1-212ENST00000486211 EIF4G2P78344 907 aaKnown RBP eCLIP10.93□□□□□ -0.66
XRN1-212ENST00000486211 DACT2Q5SW24 774 aa10.93□□□□□ -0.66
XRN1-212ENST00000486211 PODNQ7Z5L7 613 aa10.93□□□□□ -0.66
XRN1-212ENST00000486211 APOBEC3FQ8IUX4 373 aaKnown RBP10.93□□□□□ -0.66
XRN1-212ENST00000486211 PNISRQ8TF01 805 aaKnown RBP10.93□□□□□ -0.66
XRN1-212ENST00000486211 HTATIP2Q9BUP3 242 aa10.93□□□□□ -0.66
XRN1-212ENST00000486211 ARHGAP39Q9C0H5 1083 aa10.93□□□□□ -0.66
XRN1-212ENST00000486211 PRDM6Q9NQX0 595 aa10.93□□□□□ -0.66
XRN1-212ENST00000486211 MTMR10Q9NXD2 777 aa10.93□□□□□ -0.66
XRN1-212ENST00000486211 NR2E3Q9Y5X4 410 aa10.93□□□□□ -0.66
XRN1-212ENST00000486211 UNCXA6NJT0 531 aa10.92□□□□□ -0.66
XRN1-212ENST00000486211 ARHGAP33O14559 1287 aa10.92□□□□□ -0.66
XRN1-212ENST00000486211 TBC1D12O60347 775 aa10.92□□□□□ -0.66
XRN1-212ENST00000486211 ARHGEF6Q15052 776 aa10.92□□□□□ -0.66
XRN1-212ENST00000486211 COPS6Q7L5N1 327 aa10.92□□□□□ -0.66
XRN1-212ENST00000486211 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.92□□□□□ -0.66
XRN1-212ENST00000486211 FAM89AQ96GI7 184 aa10.92□□□□□ -0.66
XRN1-212ENST00000486211 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.92□□□□□ -0.66
XRN1-212ENST00000486211 STAP2Q9UGK3 403 aa10.92□□□□□ -0.66
XRN1-212ENST00000486211 VCANP13611 3396 aa10.91□□□□□ -0.66
XRN1-212ENST00000486211 GJA8P48165 433 aa10.91□□□□□ -0.66
XRN1-212ENST00000486211 XAGE3Q8WTP9 111 aa10.91□□□□□ -0.66
XRN1-212ENST00000486211 DEFB129Q9H1M3 183 aa10.91□□□□□ -0.66
XRN1-212ENST00000486211 ANKIB1Q9P2G1 1089 aa10.91□□□□□ -0.66
XRN1-212ENST00000486211 SPTBN5Q9NRC6 3674 aaKnown RBP10.9□□□□□ -0.66
XRN1-212ENST00000486211 DLG5Q8TDM6 1919 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms